prot_H-paniculata_contig177.4219.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig177.4219.1
Unique Nameprot_H-paniculata_contig177.4219.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length45
Homology
BLAST of mRNA_H-paniculata_contig177.4219.1 vs. uniprot
Match: D7FJC7_ECTSI (Rab5, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJC7_ECTSI)

HSP 1 Score: 90.9 bits (224), Expect = 1.080e-21
Identity = 41/43 (95.35%), Postives = 42/43 (97.67%), Query Frame = 0
Query:    1 MSTGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGG 43
            MS+GRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIG 
Sbjct:    1 MSSGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGA 43          
BLAST of mRNA_H-paniculata_contig177.4219.1 vs. uniprot
Match: A0A662WWK7_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WWK7_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 2.470e-21
Identity = 40/43 (93.02%), Postives = 41/43 (95.35%), Query Frame = 0
Query:    1 MSTGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGG 43
            MS GR CHFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIGG
Sbjct:    1 MSQGRTCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGG 43          
BLAST of mRNA_H-paniculata_contig177.4219.1 vs. uniprot
Match: A0A482UWF8_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UWF8_9ARCH)

HSP 1 Score: 85.9 bits (211), Expect = 2.960e-21
Identity = 38/44 (86.36%), Postives = 42/44 (95.45%), Query Frame = 0
Query:    1 MSTGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGGK 44
            M+  RVCHFKLVLLGD+AVGKSCLVVRFVRDEFFE+QEPTIGG+
Sbjct:    1 MAAQRVCHFKLVLLGDSAVGKSCLVVRFVRDEFFEFQEPTIGGQ 44          
BLAST of mRNA_H-paniculata_contig177.4219.1 vs. uniprot
Match: A0A6V1MPB5_HETAK (Hypothetical protein n=2 Tax=Chattonellaceae TaxID=658124 RepID=A0A6V1MPB5_HETAK)

HSP 1 Score: 89.7 bits (221), Expect = 2.970e-21
Identity = 40/43 (93.02%), Postives = 42/43 (97.67%), Query Frame = 0
Query:    1 MSTGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGG 43
            M++GRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIG 
Sbjct:    1 MASGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGA 43          
BLAST of mRNA_H-paniculata_contig177.4219.1 vs. uniprot
Match: W2R6W9_PHYPN (Uncharacterized protein n=2 Tax=Peronosporaceae TaxID=4777 RepID=W2R6W9_PHYPN)

HSP 1 Score: 85.9 bits (211), Expect = 4.130e-21
Identity = 38/43 (88.37%), Postives = 40/43 (93.02%), Query Frame = 0
Query:    1 MSTGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGG 43
            MS G+ CHFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIG 
Sbjct:    1 MSQGKTCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGA 43          
BLAST of mRNA_H-paniculata_contig177.4219.1 vs. uniprot
Match: F0YJN1_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJN1_AURAN)

HSP 1 Score: 88.2 bits (217), Expect = 1.210e-20
Identity = 39/43 (90.70%), Postives = 42/43 (97.67%), Query Frame = 0
Query:    1 MSTGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGG 43
            M++GRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIG 
Sbjct:    1 MASGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGA 43          
BLAST of mRNA_H-paniculata_contig177.4219.1 vs. uniprot
Match: A0A7S1XXR9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XXR9_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 7.410e-20
Identity = 36/43 (83.72%), Postives = 41/43 (95.35%), Query Frame = 0
Query:    1 MSTGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGG 43
            M++ RVCHFKLVLLGDTAVGKSC+VVRFVRDEF+E+QEPTIG 
Sbjct:   23 MASNRVCHFKLVLLGDTAVGKSCIVVRFVRDEFYEFQEPTIGA 65          
BLAST of mRNA_H-paniculata_contig177.4219.1 vs. uniprot
Match: A0A7S3ZNA4_9STRA (Hypothetical protein n=6 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZNA4_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 7.590e-20
Identity = 39/43 (90.70%), Postives = 40/43 (93.02%), Query Frame = 0
Query:    1 MSTGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGG 43
            MS  RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIG 
Sbjct:    8 MSAARVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGA 50          
BLAST of mRNA_H-paniculata_contig177.4219.1 vs. uniprot
Match: A0A4D9D9M2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D9M2_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 7.880e-20
Identity = 39/42 (92.86%), Postives = 39/42 (92.86%), Query Frame = 0
Query:    2 STGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGG 43
            S  RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIG 
Sbjct:    9 SNNRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGA 50          
BLAST of mRNA_H-paniculata_contig177.4219.1 vs. uniprot
Match: A0A7S2RYM3_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RYM3_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 1.380e-19
Identity = 38/43 (88.37%), Postives = 40/43 (93.02%), Query Frame = 0
Query:    1 MSTGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGG 43
            M+  RVCHFKLVLLGDTAVGKSCLVVRFVRDEFFE+QEPTIG 
Sbjct:    1 MAANRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEFQEPTIGA 43          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig177.4219.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJC7_ECTSI1.080e-2195.35Rab5, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2... [more]
A0A662WWK7_9STRA2.470e-2193.02Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A482UWF8_9ARCH2.960e-2186.36Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A6V1MPB5_HETAK2.970e-2193.02Hypothetical protein n=2 Tax=Chattonellaceae TaxID... [more]
W2R6W9_PHYPN4.130e-2188.37Uncharacterized protein n=2 Tax=Peronosporaceae Ta... [more]
F0YJN1_AURAN1.210e-2090.70Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S1XXR9_9STRA7.410e-2083.72Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S3ZNA4_9STRA7.590e-2090.70Hypothetical protein n=6 Tax=Pelagomonas calceolat... [more]
A0A4D9D9M2_9STRA7.880e-2092.86Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S2RYM3_9STRA1.380e-1988.37Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 9..30
score: 50.96
coord: 32..44
score: 24.8
NoneNo IPR availableGENE3D3.40.50.300coord: 2..44
e-value: 3.5E-10
score: 41.3
IPR001806Small GTPasePFAMPF00071Rascoord: 10..42
e-value: 1.1E-10
score: 41.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 8..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig177contigH-paniculata_contig177:3709..3843 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig177.4219.1mRNA_H-paniculata_contig177.4219.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig177 3709..3843 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig177.4219.1 ID=prot_H-paniculata_contig177.4219.1|Name=mRNA_H-paniculata_contig177.4219.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=45bp
MSTGRVCHFKLVLLGDTAVGKSCLVVRFVRDEFFEYQEPTIGGK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR027417P-loop_NTPase