prot_H-paniculata_contig17197.4008.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig17197.4008.1
Unique Nameprot_H-paniculata_contig17197.4008.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length204
Homology
BLAST of mRNA_H-paniculata_contig17197.4008.1 vs. uniprot
Match: D8LF19_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF19_ECTSI)

HSP 1 Score: 305 bits (782), Expect = 1.710e-98
Identity = 147/167 (88.02%), Postives = 157/167 (94.01%), Query Frame = 0
Query:    1 MVDERDKGDKLWELLGKLHENPPKADHEKTIVFSSKKRMCDRITQQAWDRGFAVDSLHGDREQWERTKVMDKYRSGEVRLLVATDVAARGLDVKDIAYVINYDFPVDGVENYIHRIGRTARGNASGSAFTFFTSADAKFAGKLVDVLKGANQDVPPDLQKMDRSGGG 167
            +VDERDKGDKLWELL KLHENPPKADH KTI+FSSKKR CD++ Q AWDRGFAVDSLHGDREQWERTKVMD+YRSGEVR+LVATDVAARGLDVKDI+YVINYDFPVDGVENYIHRIGRTARGNASG AFTFFTS+DAKFA KLV VL+GANQDVP +LQKMDR GGG
Sbjct:  374 IVDERDKGDKLWELLTKLHENPPKADHGKTIIFSSKKRNCDKLAQAAWDRGFAVDSLHGDREQWERTKVMDQYRSGEVRMLVATDVAARGLDVKDISYVINYDFPVDGVENYIHRIGRTARGNASGDAFTFFTSSDAKFANKLVGVLRGANQDVPAELQKMDRGGGG 540          
BLAST of mRNA_H-paniculata_contig17197.4008.1 vs. uniprot
Match: A0A7S3H7A5_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H7A5_9STRA)

HSP 1 Score: 199 bits (507), Expect = 1.020e-57
Identity = 98/168 (58.33%), Postives = 131/168 (77.98%), Query Frame = 0
Query:    4 ERDKGDKLWELLGKLHENPPKADHEKTIVFSSKKRMCDRITQQAWDRGFAVDSLHGDREQWERTKVMDKYRSGEVRLLVATDVAARGLDVKDIAYVINYDFP--VDGVENYIHRIGRTARGNASGSAFTFFTSADAKFAGKLVDVLKGANQDVPPDLQKMDRSGGGGR 169
            + +K DKL E+L +++ +    +  K+I+F S+K  CDR+    WD G++VD+LHGD++Q+ RT+VMD +++G++RLLVATDVAARGLDVKDI  VINYDFP  V+GVE+Y+HRIGRTARGN  G A+TFFT+ DAK A +L+ VLK ANQ+VP  LQ+ DR GGGGR
Sbjct:  349 DNEKSDKLKEVLKEINPDNKPEEVPKSIIFVSRKSDCDRLANTLWDAGYSVDALHGDKQQFLRTRVMDNFKAGKLRLLVATDVAARGLDVKDIQVVINYDFPGGVNGVEDYVHRIGRTARGNNEGKAYTFFTAGDAKRATQLIGVLKRANQEVPEGLQRFDRGGGGGR 516          
BLAST of mRNA_H-paniculata_contig17197.4008.1 vs. uniprot
Match: A0A835YJ27_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ27_9STRA)

HSP 1 Score: 194 bits (493), Expect = 2.810e-56
Identity = 97/172 (56.40%), Postives = 129/172 (75.00%), Query Frame = 0
Query:    1 MVDERDKGDKLWELLGKLH--ENPPKADHEKTIVFSSKKRMCDRITQQAWDRGFAVDSLHGDREQWERTKVMDKYRSGEVRLLVATDVAARGLDVKDIAYVINYDFPVDGVENYIHRIGRTARGNASGSAFTFFTSADAKFAGKLVDVLKGANQDVPPDLQKMDRSGGGGRG 170
            ++ E DK D L ELL      +     +H K I+F+++KR CD ++++ W+ GF+VD+LHGD+EQ ERT VM K+++G +R++VATDVAARGLDVKDIA VINYDFP  GVE+Y+HRIGRTARG A+G A TFFT  D+K+A +L+ VL+GANQ VPP+L+ M     GGRG
Sbjct:  283 VIGEGDKEDALKELLASRSTVDKEGVMEHGKIIIFTARKRTCDELSRRLWNGGFSVDALHGDKEQRERTSVMTKFKAGSIRMVVATDVAARGLDVKDIALVINYDFPTGGVEDYVHRIGRTARGGATGEAHTFFTRGDSKYAKELIRVLQGANQTVPPELEAM-----GGRG 449          
BLAST of mRNA_H-paniculata_contig17197.4008.1 vs. uniprot
Match: A0A7S1DA53_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DA53_CYCTE)

HSP 1 Score: 186 bits (472), Expect = 1.220e-55
Identity = 105/200 (52.50%), Postives = 130/200 (65.00%), Query Frame = 0
Query:    1 MVDERDKGDKLWELLGKLHENP-----------------PKADHEKTIVFSSKKRMCDRITQQAWDRGFAVDSLHGDREQWERTKVMDKYRSGEVRLLVATDVAARGLDVKDIAYVINYDFPV--DGVENYIHRIGRTARGNASGSAFTFFTSADAKFAGKLVDVLKGANQDVPPDLQKMDRSGGGGRGGRSFGWGGRGG 181
            M  + +K DKL E+L KL +N                  PK +H K IVF +KK  C+ +  Q WD G+AVDSLHGDR QWERTKVM+ ++SG++RLLVATDVAARGLDVKD+  V+NYD P   +GVE+Y+HRIGRT R    G ++TFFT  D K A  LV+VL  ANQ++PP+L  M      G GGR  G GGRGG
Sbjct:   34 MCSDAEKYDKLKEVLEKLTDNXXXXXXXXXXXXXXXXXSPK-NHVKMIVFVAKKMSCNVLADQLWDEGYAVDSLHGDRPQWERTKVMNAFKSGQLRLLVATDVAARGLDVKDVGAVVNYDMPAGSNGVEDYVHRIGRTGRAGNKGESYTFFTPGDRKCAKGLVEVLTKANQEIPPELDAMVPRFHRGYGGRGGGRGGRGG 232          
BLAST of mRNA_H-paniculata_contig17197.4008.1 vs. uniprot
Match: A0A0L0FLW3_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FLW3_9EUKA)

HSP 1 Score: 191 bits (486), Expect = 1.410e-54
Identity = 99/180 (55.00%), Postives = 133/180 (73.89%), Query Frame = 0
Query:    1 MVDERDKGDKLWELLGKLHENPPKA-DHEKTIVFSSKKRMCDRITQQAWDRGFAVDSLHGDREQWERTKVMDKYRSGEVRLLVATDVAARGLDVKDIAYVINYDFPVDGVENYIHRIGRTARGNASGSAFTFFTSADAKFAGKLVDVLKGANQDVPPDLQKMDRSGGGGRGGRSFG-WGG 178
            +VD   K D+L +LL +L E    A  H K I+F+++K  C+ +  Q W+ GFAVD LHGDREQ+ERT +M +Y + ++R+LVATDVAARGLDV+DI  VINYDFP +GVE+Y+HRIGRT RGN +G+++TFFT+ DAK A +L+ V+  A +D+ P+LQ+MDR  G GRGG S   WGG
Sbjct:  361 IVDNHSKFDELKKLLTELSETEDAAKSHPKMIIFTARKHTCNDLGNQLWESGFAVDCLHGDREQFERTNIMKQYVANDLRMLVATDVAARGLDVRDIKVVINYDFPSNGVEDYVHRIGRTGRGNDTGASYTFFTNDDAKHANELIQVMVDAGKDISPELQRMDR--GKGRGGSSKPRWGG 538          
BLAST of mRNA_H-paniculata_contig17197.4008.1 vs. uniprot
Match: A0A7S2YLW6_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YLW6_9STRA)

HSP 1 Score: 182 bits (463), Expect = 4.240e-51
Identity = 99/188 (52.66%), Postives = 125/188 (66.49%), Query Frame = 0
Query:    1 MVDERDKGDKLWELLGKLHENPPKAD----------HEKTIVFSSKKRMCDRITQQAWDRGFAVDSLHGDREQWERTKVMDKYRSGEVRLLVATDVAARGLDVKDIAYVINYDFP--VDGVENYIHRIGRTARGNASGSAFTFFTSADAKFAGKLVDVLKGANQDVPPDLQKMDRSGGGGRGGRSFGW 176
            M  + +K DKL ++L +L +    AD          H K IVF +KK  C  +  + WD GFAVDSLHGDR QWERT+VM  ++SG++RLL+ATDVAARGLDVKD+  V+NYD P  V+ VE+Y+HRIGRT R  A G A+TFFT  D K A KLV+VL  A Q++P +LQ M R   GGRGG   G+
Sbjct:  348 MCRDDEKFDKLIDILKELTKEAEPADGPTPAGGGKHHAKVIVFVAKKISCHDLANRLWDDGFAVDSLHGDRAQWERTRVMTAFKSGQLRLLIATDVAARGLDVKDVGVVVNYDMPAGVNAVEDYVHRIGRTGRAGAKGKAYTFFTQDDRKAATKLVEVLTKAEQEIPAELQAMVRPRFGGRGGGRGGY 535          
BLAST of mRNA_H-paniculata_contig17197.4008.1 vs. uniprot
Match: A0A7S1B560_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B560_9STRA)

HSP 1 Score: 176 bits (445), Expect = 1.720e-50
Identity = 94/179 (52.51%), Postives = 124/179 (69.27%), Query Frame = 0
Query:    1 MVDERDKGDKLWELLGKLHENPPKAD-HEKTIVFSSKKRMCDRITQQAWDRGFAVDSLHGDREQWERTKVMDKYRSGEVRLLVATDVAARGLDVKDIAYVINYDFPV--DGVENYIHRIGRTARGNASGSAFTFFTSADAKFAGKLVDVLKGANQDVPPDLQKMDRS----GGGGRGGR 172
            M +E +K DKL  +L +L E   K + H + IVF ++K  CD +  + W+ G+AVDSLHGDR+QWERTKV++ ++SG +R+LVATDVAARGLDVK +  V+NYD P   +GVE+Y+HRIGRT R  A G A  FFT +D+K A +LV+VL+ A Q +P  L  M R     GGGG GGR
Sbjct:  171 MNNEEEKMDKLKSILDELSEGGTKKESHGRAIVFVARKMSCDALANEMWELGYAVDSLHGDRQQWERTKVINAFKSGNLRMLVATDVAARGLDVKGVELVVNYDMPAGQNGVEDYVHRIGRTGRAGAKGLAHAFFTRSDSKRARELVEVLQKAGQVIPDWLASMGRPRGRFGGGGYGGR 349          
BLAST of mRNA_H-paniculata_contig17197.4008.1 vs. uniprot
Match: B7S475_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7S475_PHATC)

HSP 1 Score: 180 bits (456), Expect = 3.830e-50
Identity = 95/174 (54.60%), Postives = 120/174 (68.97%), Query Frame = 0
Query:    1 MVDERDKGDKLWELLGKLHENPPKADHEKTIVFSSKKRMCDRITQQAWDRGFAVDSLHGDREQWERTKVMDKYRSGEVRLLVATDVAARGLDVKDIAYVINYDFP--VDGVENYIHRIGRTARGNASGSAFTFFTSADAKFAGKLVDVLKGANQDVPPDLQKMDRS--GGGGRG 170
            M  E +K DKL ++L  L        H K IVF +KK  C+ +  + W+ GFAVDSLHGDR QWERT+VM  ++ G++R+L+ATDVAARGLDVKD+  V+NYD P  V+GVE+Y+HRIGRT R    G A+TFFT  D K A +LV VL  A Q++PP+LQ M R   GGGGRG
Sbjct:  366 MCSESEKLDKLEQILRDLM-------HGKIIVFVAKKISCNDLANRLWEDGFAVDSLHGDRPQWERTRVMQAFKGGQLRVLIATDVAARGLDVKDVGVVVNYDMPSGVNGVEDYVHRIGRTGRAGNKGKAYTFFTQGDRKNATQLVQVLTKAQQEIPPELQAMARPRFGGGGRG 532          
BLAST of mRNA_H-paniculata_contig17197.4008.1 vs. uniprot
Match: A0A7S2RMQ1_9STRA (Hypothetical protein (Fragment) n=2 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RMQ1_9STRA)

HSP 1 Score: 180 bits (456), Expect = 4.530e-50
Identity = 102/197 (51.78%), Postives = 132/197 (67.01%), Query Frame = 0
Query:    1 MVDERDKGDKLWELLGKL-HENPPKAD------------HEKTIVFSSKKRMCDRITQQAWDRGFAVDSLHGDREQWERTKVMDKYRSGEVRLLVATDVAARGLDVKDIAYVINYDFP--VDGVENYIHRIGRTARGNASGSAFTFFTSADAKFAGKLVDVLKGANQDVPPDLQKMDRSGGGGRGGRSFGWGGRGGG 182
            MV++ +K D+L ++L  L +E  P+ +            H K IVF ++K  CD +  Q WD GFAVDSLHGDR QWERTKV++ +++G +R+L+ATDVAARGLDVK +  V+NYD P  V+GVE+Y+HRIGRT R  A G A TFFTS D K AGKL++VLK A Q++P  L+ M      GRGGR    GG GGG
Sbjct:  365 MVEDFEKLDRLKKILTDLTNEGVPEGEDATKARDLGGKKHPKVIVFVARKVNCDSLANQLWDDGFAVDSLHGDRVQWERTKVINAFKAGTLRMLIATDVAARGLDVKGVGMVVNYDMPLGVNGVEDYVHRIGRTGRAGAKGLADTFFTSGDRKCAGKLIEVLKHAGQEIPAALEAMAPRFSQGRGGR----GGYGGG 557          
BLAST of mRNA_H-paniculata_contig17197.4008.1 vs. uniprot
Match: B8BR52_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BR52_THAPS)

HSP 1 Score: 177 bits (450), Expect = 5.490e-50
Identity = 91/165 (55.15%), Postives = 113/165 (68.48%), Query Frame = 0
Query:    1 MVDERDKGDKLWELLGKLHENPPKADHEKTIVFSSKKRMCDRITQQAWDRGFAVDSLHGDREQWERTKVMDKYRSGEVRLLVATDVAARGLDVKDIAYVINYDFPV--DGVENYIHRIGRTARGNASGSAFTFFTSADAKFAGKLVDVLKGANQDVPPDLQKMDR 163
            M  E DK D+L E+L  L        H K IVF  KK +   +  Q WD GFAVDSLHGDREQWERTKV++ ++ G +RLL+ATDVAARGLDVKD+  V+NYD PV  +G E+YIHRIGRT R  A G A+T FT  D K A +LV++L+ A Q+VP +L+ M R
Sbjct:  276 MCSEDDKIDRLKEILTDLK-------HSKVIVFVGKKYVAHELANQLWDEGFAVDSLHGDREQWERTKVINAFKQGTLRLLIATDVAARGLDVKDVGVVVNYDMPVGVNGAEDYIHRIGRTGRAGAKGIAYTMFTPGDKKLATQLVEILEKAEQEVPAELKAMAR 433          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig17197.4008.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LF19_ECTSI1.710e-9888.02DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A7S3H7A5_9STRA1.020e-5758.33Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A835YJ27_9STRA2.810e-5656.40P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S1DA53_CYCTE1.220e-5552.50Hypothetical protein (Fragment) n=1 Tax=Cyclophora... [more]
A0A0L0FLW3_9EUKA1.410e-5455.00Uncharacterized protein n=1 Tax=Sphaeroforma arcti... [more]
A0A7S2YLW6_9STRA4.240e-5152.66Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A7S1B560_9STRA1.720e-5052.51Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
B7S475_PHATC3.830e-5054.60Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S2RMQ1_9STRA4.530e-5051.78Hypothetical protein (Fragment) n=2 Tax=Eucampia a... [more]
B8BR52_THAPS5.490e-5055.15Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 41..123
e-value: 3.3E-24
score: 96.4
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 24..123
e-value: 1.1E-27
score: 96.5
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 10..162
score: 22.604
NoneNo IPR availableGENE3D3.40.50.300coord: 1..164
e-value: 1.8E-48
score: 166.2
NoneNo IPR availablePANTHERPTHR24031:SF638DEAD-BOX ATP-DEPENDENT RNA HELICASE 46coord: 26..165
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 26..165
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 6..171

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig17197contigH-paniculata_contig17197:1949..4437 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig17197.4008.1mRNA_H-paniculata_contig17197.4008.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig17197 1949..4437 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig17197.4008.1 ID=prot_H-paniculata_contig17197.4008.1|Name=mRNA_H-paniculata_contig17197.4008.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=204bp
MVDERDKGDKLWELLGKLHENPPKADHEKTIVFSSKKRMCDRITQQAWDR
GFAVDSLHGDREQWERTKVMDKYRSGEVRLLVATDVAARGLDVKDIAYVI
NYDFPVDGVENYIHRIGRTARGNASGSAFTFFTSADAKFAGKLVDVLKGA
NQDVPPDLQKMDRSGGGGRGGRSFGWGGRGGGRGRGGGRGRGGGRGGGRG
RKW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR027417P-loop_NTPase