prot_H-paniculata_contig16660.3762.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig16660.3762.1
Unique Nameprot_H-paniculata_contig16660.3762.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length110
Homology
BLAST of mRNA_H-paniculata_contig16660.3762.1 vs. uniprot
Match: D7G556_ECTSI (Dimethylmenaquinone methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G556_ECTSI)

HSP 1 Score: 173 bits (439), Expect = 7.810e-53
Identity = 84/101 (83.17%), Postives = 93/101 (92.08%), Query Frame = 0
Query:    1 IRQLRFPVYCRFVNPMAGRCVILDRKLMQIPVTIGGVEINSGDVIVGDDDGVVVLGSDLDKIKDLAIRASEILRNERAVLTEVLDNNRCLLEFMNLMDSHK 101
            I +LRFPVYCRFVNPMAGRC+ LDR LMQ+PVTIGGVEIN GDVI+GDDDGVVVLG+DLDKI+  A+ ASEILRNE AVLTEVLDNNRCLLEFM++MDSHK
Sbjct:  106 IARLRFPVYCRFVNPMAGRCITLDRDLMQVPVTIGGVEINPGDVIMGDDDGVVVLGNDLDKIQKTALAASEILRNESAVLTEVLDNNRCLLEFMDMMDSHK 206          
BLAST of mRNA_H-paniculata_contig16660.3762.1 vs. uniprot
Match: A0A6H5L9B9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9B9_9PHAE)

HSP 1 Score: 172 bits (435), Expect = 4.670e-48
Identity = 83/101 (82.18%), Postives = 93/101 (92.08%), Query Frame = 0
Query:    1 IRQLRFPVYCRFVNPMAGRCVILDRKLMQIPVTIGGVEINSGDVIVGDDDGVVVLGSDLDKIKDLAIRASEILRNERAVLTEVLDNNRCLLEFMNLMDSHK 101
            I +LRFPVYCRFVNPMAGRC+ LDR LMQ+PVTIGGV+IN GDVI+GDDDGVVVLG+DLDKI+  A+ ASEILRNE AVLTEVLDNNRCLLEFM++MDSHK
Sbjct:  588 IARLRFPVYCRFVNPMAGRCITLDRDLMQVPVTIGGVKINPGDVIMGDDDGVVVLGNDLDKIQKTALAASEILRNESAVLTEVLDNNRCLLEFMDMMDSHK 688          
BLAST of mRNA_H-paniculata_contig16660.3762.1 vs. uniprot
Match: A0A835YLR9_9STRA (Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLR9_9STRA)

HSP 1 Score: 115 bits (287), Expect = 3.180e-29
Identity = 55/98 (56.12%), Postives = 75/98 (76.53%), Query Frame = 0
Query:    3 QLRFPVYCRFVNPMAGRCVILDRKLMQIPVTIGGVEINSGDVIVGDDDGVVVLGSDLDKIKDLAIRASEILRNERAVLTEVLDNNRCLLEFMNLMDSH 100
            +L FP Y R V+PMAG CV LD+ L+ +PVT+ GV + +GDV+ GD DGVV LG D+D ++ LA RA+EI ++ER VL EVL+++RCL EFM ++DSH
Sbjct:  163 RLDFPFYSRSVSPMAGVCVTLDQSLLGVPVTVSGVTVANGDVLFGDQDGVVNLGQDMDNVELLARRAAEIRQHERLVLKEVLEHDRCLAEFMTILDSH 260          
BLAST of mRNA_H-paniculata_contig16660.3762.1 vs. uniprot
Match: A0A832ZZF5_9EURY (RraA family protein n=1 Tax=Methanothermococcus okinawensis TaxID=155863 RepID=A0A832ZZF5_9EURY)

HSP 1 Score: 64.3 bits (155), Expect = 2.280e-10
Identity = 34/84 (40.48%), Postives = 53/84 (63.10%), Query Frame = 0
Query:    1 IRQLRFPVYCRFVNPMAGRCVILDRKLMQIPVTIGGVEINSGDVIVGDDDGVVVLGSDLDKIKDLAIRASEILRNERAVLTEVL 84
            IR++RFPV+ R   P AG    LDR +M + VT GG+ +N GD++VGD +GVVV+  + D++ ++  R  EI R E  +   ++
Sbjct:  101 IRRVRFPVFSRGYTPRAG--APLDRGVMGVTVTCGGIRVNPGDIVVGDCNGVVVI--ERDRLGEVLERVKEIKRKESKIRDRIM 180          
BLAST of mRNA_H-paniculata_contig16660.3762.1 vs. uniprot
Match: UPI001FDFF7B3 (RraA family protein n=3 Tax=Nocardia TaxID=1817 RepID=UPI001FDFF7B3)

HSP 1 Score: 65.1 bits (157), Expect = 3.050e-10
Identity = 40/98 (40.82%), Postives = 60/98 (61.22%), Query Frame = 0
Query:    1 IRQLRFPVYCRFVNPMAGRCVILDRKLMQIPVTIGGVEINSGDVIVGDDDGVVVLGSDLDKIKDLAIRASEILRNERAVLTEVLDNNRCLLEFMNLMD 98
            +R    PVY RFV PMAG  V L    +QIPVT GGVE++ GD+I+ D++GV+V+  D D++  L   A+ + ++  A L  +LD    L + +NL +
Sbjct:  162 VRGCTLPVYSRFVTPMAGSTVQLGE--LQIPVTCGGVEVSPGDLILADEEGVIVV--DPDRLGALLDTAAAV-KDAEAELVALLDTGSTLGDGLNLAE 254          
BLAST of mRNA_H-paniculata_contig16660.3762.1 vs. uniprot
Match: A0A401HPN3_9EURY (3-hexulose-6-phosphate synthase n=3 Tax=Methanococcales TaxID=2182 RepID=A0A401HPN3_9EURY)

HSP 1 Score: 63.9 bits (154), Expect = 3.450e-10
Identity = 35/84 (41.67%), Postives = 53/84 (63.10%), Query Frame = 0
Query:    1 IRQLRFPVYCRFVNPMAGRCVILDRKLMQIPVTIGGVEINSGDVIVGDDDGVVVLGSDLDKIKDLAIRASEILRNERAVLTEVL 84
            IR++RFPV+ R   P AG    LDR +M IPV  G   + SGDVI+GD +GVVV+  + D+++++  +A EI R E  +   ++
Sbjct:  105 IRRIRFPVFSRGYTPKAG--TPLDRGVMGIPVNCGDTTVKSGDVIIGDCNGVVVI--ERDRVEEVLEKAKEIKRKESKIRDRIM 184          
BLAST of mRNA_H-paniculata_contig16660.3762.1 vs. uniprot
Match: UPI001C443B9F (RraA family protein n=1 Tax=Nocardia iowensis TaxID=204891 RepID=UPI001C443B9F)

HSP 1 Score: 63.2 bits (152), Expect = 9.270e-10
Identity = 38/96 (39.58%), Postives = 58/96 (60.42%), Query Frame = 0
Query:    1 IRQLRFPVYCRFVNPMAGRCVILDRKLMQIPVTIGGVEINSGDVIVGDDDGVVVLGSDLDKIKDLAIRASEILRNERAVLTEVLDNNRCLLEFMNL 96
            +R    P+Y RFV PMAG    L    +QIPVT GGVE+  GD+I+ D++G+VV+  D D+I+ L   A+ I   E +++ + LD    L + +N+
Sbjct:  110 VRSCELPIYSRFVTPMAGTTSQLGE--LQIPVTCGGVEVAPGDLILADEEGIVVV--DPDRIEALLDAAASIKEAEASLIAK-LDEGATLSDGLNV 200          
BLAST of mRNA_H-paniculata_contig16660.3762.1 vs. uniprot
Match: A0A3D5DEW3_9GAMM (Dimethylmenaquinone methyltransferase (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DEW3_9GAMM)

HSP 1 Score: 63.2 bits (152), Expect = 9.380e-10
Identity = 41/100 (41.00%), Postives = 58/100 (58.00%), Query Frame = 0
Query:    1 IRQLRFPVYCRFVNPMAGRCVILDRKLMQIPVTIGGVEINSGDVIVGDDDGVVVLGSDLDKIKDLAIRASEILRNERAVLTEVLDNNRCLLEFMNLMDSH 100
            IR L  PVY R  +P++G    L  +  QI +  GGVE+N GDV+ GDDDG++V GS +D++  L   A  I   E+AV+ E L N   LL  +N  + +
Sbjct:  110 IRTLDMPVYARGSSPVSGTTNTLGER--QIKIDCGGVEVNPGDVVFGDDDGIIV-GS-IDELAALIPSAETIKSTEQAVI-EKLANGTSLLSLLNFAEHY 204          
BLAST of mRNA_H-paniculata_contig16660.3762.1 vs. uniprot
Match: A0A523CJ23_9BACT (Bifunctional hexulose-6-phosphate synthase/ribonuclease regulator n=2 Tax=Planctomycetes TaxID=203682 RepID=A0A523CJ23_9BACT)

HSP 1 Score: 64.3 bits (155), Expect = 9.710e-10
Identity = 38/97 (39.18%), Postives = 56/97 (57.73%), Query Frame = 0
Query:    1 IRQLRFPVYCRFVNPMAGRCVILDRKLMQIPVTIGGVEINSGDVIVGDDDGVVVLGSDLDKIKDLAIRASEILRNERAVLTEVLDNNRCLLEFMNLM 97
            IR+L+FP + +FV P AG         M++PVTI GV I SGD IVGD+DG++V+     K +++A  A +    E  +  E+L N   L E + L+
Sbjct:  337 IRKLKFPTFTKFVMPNAGEPKGFGE--MEVPVTISGVRIKSGDWIVGDEDGLIVVPKQ--KAREMANLAMDCCERENRLREEILGNKTSLGEVIELL 429          
BLAST of mRNA_H-paniculata_contig16660.3762.1 vs. uniprot
Match: A0A7J3GCU0_9ARCH (RraA family protein n=1 Tax=Candidatus Bathyarchaeota archaeon TaxID=2026714 RepID=A0A7J3GCU0_9ARCH)

HSP 1 Score: 60.8 bits (146), Expect = 1.400e-9
Identity = 30/57 (52.63%), Postives = 43/57 (75.44%), Query Frame = 0
Query:    1 IRQLRFPVYCRFVN--PMAGRCVILDRKLMQIPVTIGGVEINSGDVIVGDDDGVVVL 55
            I+++RFPV+CR +    + GR  I  ++ + IP++IGGV +N GDVIVGDDDGVVV+
Sbjct:   36 IQRMRFPVFCRAIGRTEVVGRLEI-KQEFINIPISIGGVTVNPGDVIVGDDDGVVVV 91          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16660.3762.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G556_ECTSI7.810e-5383.17Dimethylmenaquinone methyltransferase n=1 Tax=Ecto... [more]
A0A6H5L9B9_9PHAE4.670e-4882.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YLR9_9STRA3.180e-2956.12Ribonuclease E inhibitor RraA/Dimethylmenaquinone ... [more]
A0A832ZZF5_9EURY2.280e-1040.48RraA family protein n=1 Tax=Methanothermococcus ok... [more]
UPI001FDFF7B33.050e-1040.82RraA family protein n=3 Tax=Nocardia TaxID=1817 Re... [more]
A0A401HPN3_9EURY3.450e-1041.673-hexulose-6-phosphate synthase n=3 Tax=Methanococ... [more]
UPI001C443B9F9.270e-1039.58RraA family protein n=1 Tax=Nocardia iowensis TaxI... [more]
A0A3D5DEW3_9GAMM9.380e-1041.00Dimethylmenaquinone methyltransferase (Fragment) n... [more]
A0A523CJ23_9BACT9.710e-1039.18Bifunctional hexulose-6-phosphate synthase/ribonuc... [more]
A0A7J3GCU0_9ARCH1.400e-952.63RraA family protein n=1 Tax=Candidatus Bathyarchae... [more]

Pages

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.50.30.100coord: 1..79
e-value: 4.5E-16
score: 60.8
IPR005493Ribonuclease E inhibitor RraA/RraA-like proteinPFAMPF03737RraA-likecoord: 1..54
e-value: 1.1E-10
score: 41.8
IPR036704Ribonuclease E inhibitor RraA/RraA-like superfamilySUPERFAMILY89562RraA-likecoord: 1..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16660contigH-paniculata_contig16660:154..3395 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16660.3762.1mRNA_H-paniculata_contig16660.3762.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig16660 154..3395 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig16660.3762.1 ID=prot_H-paniculata_contig16660.3762.1|Name=mRNA_H-paniculata_contig16660.3762.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=110bp
IRQLRFPVYCRFVNPMAGRCVILDRKLMQIPVTIGGVEINSGDVIVGDDD
GVVVLGSDLDKIKDLAIRASEILRNERAVLTEVLDNNRCLLEFMNLMDSH
KDKGNHPPP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005493RraA/RraA-like
IPR036704RraA/RraA-like_sf