prot_H-paniculata_contig1650.3702.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1650.3702.1
Unique Nameprot_H-paniculata_contig1650.3702.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length281
Homology
BLAST of mRNA_H-paniculata_contig1650.3702.1 vs. uniprot
Match: D7FKT1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKT1_ECTSI)

HSP 1 Score: 156 bits (395), Expect = 1.140e-42
Identity = 116/231 (50.22%), Postives = 131/231 (56.71%), Query Frame = 0
Query:    1 MKPMKVLSAEGNKGVPLDPALGDLLQGLLKLDSRHRLSARDALANPYFAPRPEAAEERCDAWNTLRGDLDKVQMGVATPDQLRGTYAAATASTAP-------RGLVVPSXXXXXXXXRQSRHQEDHNG--RGDQGMGRPGYASXXXXXXXXXXXXGHSQAL------AVELAVELPLGAPVVPDLELKARTDGDTRGDRARGGAIGGGGYHREHSQSPRGGHRRRSPVHSR 216
            +KP KVL+AEGNKGVPLDPAL DLLQGLLKLDSRHRLSARDALA+PYFAPR    +ER DAW TLRGDLDKVQMGVATPDQLRGT+AAA A T P       RGL    XXX       S H   H    R  +   R G  S            G   A        + ++V+LPL  P  P        +   R  RA  G +    + +  S SPRGG RRRSP + R
Sbjct:    7 LKP-KVLAAEGNKGVPLDPALADLLQGLLKLDSRHRLSARDALASPYFAPRHGQHDERLDAWVTLRGDLDKVQMGVATPDQLRGTFAAANAPTGPXXXXXXXRGLADAXXXXLSPRGGPSGHPSQHGRPQRDRKEEERAGRRSHADKARESRRARGRGVATPSPPREGLHISVQLPL-KPDPPGGYGAVSVERTGRAGRADRGRLED--HVKTRSPSPRGG-RRRSPANGR 232          
BLAST of mRNA_H-paniculata_contig1650.3702.1 vs. uniprot
Match: D8LK48_ECTSI (Possible Cdc2-related protein kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK48_ECTSI)

HSP 1 Score: 156 bits (394), Expect = 2.850e-39
Identity = 114/227 (50.22%), Postives = 128/227 (56.39%), Query Frame = 0
Query:    5 KVLSAEGNKGVPLDPALGDLLQGLLKLDSRHRLSARDALANPYFAPRPEAAEERCDAWNTLRGDLDKVQMGVATPDQLRGTYAAATASTAP-------RGLVVPSXXXXXXXXRQSRHQEDHNG--RGDQGMGRPGYASXXXXXXXXXXXXGHSQAL------AVELAVELPLGAPVVPDLELKARTDGDTRGDRARGGAIGGGGYHREHSQSPRGGHRRRSPVHSR 216
            KVL+AEGNKGVPLDPAL DLLQGLLKLDSRHRLSARDALA+PYFAPR    +ER DAW TLRGDLDKVQMGVATPDQLRGT+AAA A T P       RGL    XXX       S H   H    R  +   R G  S            G   A        + ++V+LPL  P  P        +   R  RA  G +    + +  S SPRGG RRRSP + R
Sbjct: 1623 KVLAAEGNKGVPLDPALADLLQGLLKLDSRHRLSARDALASPYFAPRHGQHDERLDAWVTLRGDLDKVQMGVATPDQLRGTFAAANAPTGPXXXXXXXRGLADAXXXXLSPRGGPSGHPSQHGRPQRDRKEEERAGRRSHADKARESRRARGRGVATPSPPREGLHISVQLPL-KPDPPGGYGAVSVERTGRAGRADRGRLED--HVKTRSPSPRGG-RRRSPANGR 1845          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1650.3702.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FKT1_ECTSI1.140e-4250.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LK48_ECTSI2.850e-3950.22Possible Cdc2-related protein kinase n=2 Tax=Ectoc... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1650contigH-paniculata_contig1650:1901..3095 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1650.3702.1mRNA_H-paniculata_contig1650.3702.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1650 1901..3095 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1650.3702.1 ID=prot_H-paniculata_contig1650.3702.1|Name=mRNA_H-paniculata_contig1650.3702.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=281bp
MKPMKVLSAEGNKGVPLDPALGDLLQGLLKLDSRHRLSARDALANPYFAP
RPEAAEERCDAWNTLRGDLDKVQMGVATPDQLRGTYAAATASTAPRGLVV
PSPSPPPPPPRQSRHQEDHNGRGDQGMGRPGYASSPSPPPPPPRNGGHSQ
ALAVELAVELPLGAPVVPDLELKARTDGDTRGDRARGGAIGGGGYHREHS
QSPRGGHRRRSPVHSRTRDGGDRNNERDREIHREGRERDRKRKRDRERER
GRDRSRGERSGSGKDHRRNSRSRGEGSYHR*
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