prot_H-paniculata_contig16488.3696.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig16488.3696.1
Unique Nameprot_H-paniculata_contig16488.3696.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length143
Homology
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BLAST of mRNA_H-paniculata_contig16488.3696.1 vs. uniprot
Match: D8LSM7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSM7_ECTSI)

HSP 1 Score: 157 bits (397), Expect = 3.270e-42
Identity = 72/102 (70.59%), Postives = 88/102 (86.27%), Query Frame = 0 
Query:    1 MMLAYVKLLTVRNGQLEDDIRVLRGLEIRGRNCEWVEQLVDSVVFGKMVGCPWWVGILAFLTSRLPNHEATKTVMASENKLKTAGMTLLNLAIGRTPGAEEE 102
            +++AYVKLL V+NGQLEDD+R+L GL+IRG +CEW+E+ VDSVVFG MVGCPWW G+LA   S LPNHE TK VMAS++KLKT GMTLLN AIGRTPGA+++
Sbjct:  521 LVMAYVKLLVVKNGQLEDDVRILSGLKIRGYDCEWIERGVDSVVFGMMVGCPWWAGLLAVAFSLLPNHEVTKKVMASDDKLKTLGMTLLNKAIGRTPGADDD 622
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BLAST of mRNA_H-paniculata_contig16488.3696.1 vs. uniprot
Match: A0A835YJH6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJH6_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 1.520e-6
Identity = 25/55 (45.45%), Postives = 37/55 (67.27%), Query Frame = 0 
Query:    4 AYVKLLTVRNGQLEDDIRVLRGLEIRGRNCEWVEQLVDSVVFGKMVGCPWWVGIL 58
            AY +LL+VR+ QL  D+RVL GL++ G    W+E +VDS ++ +M+G P W   L
Sbjct:  267 AYAQLLSVRHAQLGGDVRVLSGLKLGGVGLGWLELVVDSALYARMLGLPRWTAFL 321
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig16488.3696.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LSM7_ECTSI3.270e-4270.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YJH6_9STRA1.520e-645.45Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig16488contigH-paniculata_contig16488:1054..3695 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig16488.3696.1mRNA_H-paniculata_contig16488.3696.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig16488 996..4331 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig16488.3696.1 ID=prot_H-paniculata_contig16488.3696.1|Name=mRNA_H-paniculata_contig16488.3696.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=143bp
MMLAYVKLLTVRNGQLEDDIRVLRGLEIRGRNCEWVEQLVDSVVFGKMVG
CPWWVGILAFLTSRLPNHEATKTVMASENKLKTAGMTLLNLAIGRTPGAE
EEEENDDAGEGGESRGEDPKSPPTKLSKMAKVAAVATGITDS*
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