prot_H-paniculata_contig1635.3635.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1635.3635.1
Unique Nameprot_H-paniculata_contig1635.3635.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length156
Homology
BLAST of mRNA_H-paniculata_contig1635.3635.1 vs. uniprot
Match: A0A6H5KD88_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD88_9PHAE)

HSP 1 Score: 128 bits (322), Expect = 4.150e-35
Identity = 91/155 (58.71%), Postives = 109/155 (70.32%), Query Frame = 0
Query:    1 MFSALMAAAVRQCSPATALAAIPSTSVSLFAGSICVAKRXXXXXXXXXXXXXXXXXXRRLGVKKFGGEAVIAGNIIMRQRGTQFHPGKNVGMGKDHTVFSLVTGHVLFKRDRFTKRRSIHVVKAPVDHALLEAQKMENEAREARIRAASGIYAKL 155
            MF  L +A  R+C            + +LFAG+ C    XXXXXXXXXXXXXXXXXX  LGVKKFGGE V+AGNII+RQRGTQF+PGK VGMGKDHT+F++  G V+F R  FTKRR++ V+KA VD   + A   E +AREAR RAASGIY  +
Sbjct:    1 MFGVLTSALARECRSVVT----GRMAGALFAGTTCXXXXXXXXXXXXXXXXXXXXXXXXLGVKKFGGENVVAGNIIIRQRGTQFYPGKGVGMGKDHTLFAMHPGFVVFSRSPFTKRRTVSVMKAKVDTEAVAALLAEEQAREARARAASGIYVSM 151          
BLAST of mRNA_H-paniculata_contig1635.3635.1 vs. uniprot
Match: D7FJF8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJF8_ECTSI)

HSP 1 Score: 130 bits (326), Expect = 1.520e-34
Identity = 86/128 (67.19%), Postives = 101/128 (78.91%), Query Frame = 0
Query:   28 SLFAGSICVAKRXXXXXXXXXXXXXXXXXXRRLGVKKFGGEAVIAGNIIMRQRGTQFHPGKNVGMGKDHTVFSLVTGHVLFKRDRFTKRRSIHVVKAPVDHALLEAQKMENEAREARIRAASGIYAKL 155
            +LFAG+ CV   XXXXXXXXXXXXXXXXXX  LGVKKFGGE V+AGNII+RQRGTQF+PGK VGMGKDHT+F++  G V+F R  FTKRR++ V+KA VD   + A   E +AREAR RAASGIY  +
Sbjct:  122 ALFAGTTCVXXXXXXXXXXXXXXXXXXXXXXXLGVKKFGGENVVAGNIIIRQRGTQFYPGKGVGMGKDHTLFAMYPGFVVFSRSPFTKRRTVSVMKAKVDTEAVAALLAEEQAREARARAASGIYVSM 249          
BLAST of mRNA_H-paniculata_contig1635.3635.1 vs. uniprot
Match: E0UQT2_SULAO (50S ribosomal protein L27 n=9 Tax=root TaxID=1 RepID=E0UQT2_SULAO)

HSP 1 Score: 96.3 bits (238), Expect = 3.140e-23
Identity = 47/67 (70.15%), Postives = 57/67 (85.07%), Query Frame = 0
Query:   58 RRLGVKKFGGEAVIAGNIIMRQRGTQFHPGKNVGMGKDHTVFSLVTGHVLFKRDRFTKRRSIHVVKA 124
            RRLGVKKFGGEAVIAGNII+RQRGT+ HPGKNVGMGKDHT+F+LV G V F+R +  KR+ + ++ A
Sbjct:   19 RRLGVKKFGGEAVIAGNIIIRQRGTKVHPGKNVGMGKDHTIFALVDGIVAFER-KDKKRQQVSIIPA 84          
BLAST of mRNA_H-paniculata_contig1635.3635.1 vs. uniprot
Match: A0A2D7TDH5_9PROT (50S ribosomal protein L27 n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2D7TDH5_9PROT)

HSP 1 Score: 95.5 bits (236), Expect = 7.040e-23
Identity = 43/58 (74.14%), Postives = 50/58 (86.21%), Query Frame = 0
Query:   58 RRLGVKKFGGEAVIAGNIIMRQRGTQFHPGKNVGMGKDHTVFSLVTGHVLFKRDRFTK 115
            RRLGVKKFG EAV+AGNII+RQRGT++HPG NVGMGKDHT+FSL+ GHV FK  +  K
Sbjct:   19 RRLGVKKFGSEAVVAGNIIIRQRGTKYHPGSNVGMGKDHTIFSLIDGHVKFKEHKGKK 76          
BLAST of mRNA_H-paniculata_contig1635.3635.1 vs. uniprot
Match: A0A2E3XGZ2_9PROT (50S ribosomal protein L27 n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E3XGZ2_9PROT)

HSP 1 Score: 94.7 bits (234), Expect = 1.260e-22
Identity = 42/55 (76.36%), Postives = 49/55 (89.09%), Query Frame = 0
Query:   58 RRLGVKKFGGEAVIAGNIIMRQRGTQFHPGKNVGMGKDHTVFSLVTGHVLFKRDR 112
            RRLGVKK+GGE VI GNII+RQRGT+FHPG+NVGMGKDHT+F+L+ GHV F R R
Sbjct:   19 RRLGVKKYGGEVVIPGNIIIRQRGTKFHPGENVGMGKDHTIFALIEGHVSFSRGR 73          
BLAST of mRNA_H-paniculata_contig1635.3635.1 vs. uniprot
Match: A0A7N0SZT4_KALFE (Uncharacterized protein n=2 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0SZT4_KALFE)

HSP 1 Score: 97.1 bits (240), Expect = 1.630e-22
Identity = 49/85 (57.65%), Postives = 61/85 (71.76%), Query Frame = 0
Query:   58 RRLGVKKFGGEAVIAGNIIMRQRGTQFHPGKNVGMGKDHTVFSLVTGHVLFKRDRFTKRRSIHVV--KAPVDHALLEAQKMENEA 140
            + LGVKKFGGE VI GNII+RQRGT+FHPG  VGMGKDHT+F+LV G V F+ ++ TKR+ IHV   + P  H +  A    N+A
Sbjct:   84 KNLGVKKFGGERVIPGNIIVRQRGTRFHPGDYVGMGKDHTLFALVEGRVKFETNKLTKRKWIHVEPKEGPTLHPIYTASAAANQA 168          
BLAST of mRNA_H-paniculata_contig1635.3635.1 vs. uniprot
Match: A0A6B8KIL0_9HYPH (50S ribosomal protein L27 n=1 Tax=Methylocystis heyeri TaxID=391905 RepID=A0A6B8KIL0_9HYPH)

HSP 1 Score: 94.0 bits (232), Expect = 2.680e-22
Identity = 48/67 (71.64%), Postives = 55/67 (82.09%), Query Frame = 0
Query:   58 RRLGVKKFGGEAVIAGNIIMRQRGTQFHPGKNVGMGKDHTVFSLVTGHVLFKRDRFTKRRSIHVVKA 124
            RRLGVKKFGGE+VI GNII+RQRGT++HPG NVGMGKDHT+F+LV G VLFK  R   R S+ VV A
Sbjct:   19 RRLGVKKFGGESVIGGNIIVRQRGTKWHPGDNVGMGKDHTLFALVEGKVLFKSTR--GRSSVSVVPA 83          
BLAST of mRNA_H-paniculata_contig1635.3635.1 vs. uniprot
Match: A0A2E5J5L1_9RICK (50S ribosomal protein L27 n=1 Tax=Rickettsiales bacterium TaxID=2026788 RepID=A0A2E5J5L1_9RICK)

HSP 1 Score: 93.6 bits (231), Expect = 3.690e-22
Identity = 42/53 (79.25%), Postives = 50/53 (94.34%), Query Frame = 0
Query:   58 RRLGVKKFGGEAVIAGNIIMRQRGTQFHPGKNVGMGKDHTVFSLVTGHVLFKR 110
            RRLGVKKFGGEAV+ GNII+RQRGT++HPGKNVG+GKDHT+FSL  G+VLFK+
Sbjct:   19 RRLGVKKFGGEAVLPGNIIIRQRGTKYHPGKNVGIGKDHTIFSLEKGNVLFKK 71          
BLAST of mRNA_H-paniculata_contig1635.3635.1 vs. uniprot
Match: UPI00190800A6 (50S ribosomal protein L27 n=2 Tax=Roseibacillus TaxID=518755 RepID=UPI00190800A6)

HSP 1 Score: 93.6 bits (231), Expect = 3.900e-22
Identity = 42/54 (77.78%), Postives = 51/54 (94.44%), Query Frame = 0
Query:   58 RRLGVKKFGGEAVIAGNIIMRQRGTQFHPGKNVGMGKDHTVFSLVTGHVLFKRD 111
            +RLGVKKFGGEAVIAGNII+RQRGT++HPGKN+GMGKDHT+F+LV G+V F R+
Sbjct:   19 KRLGVKKFGGEAVIAGNIIVRQRGTKWHPGKNIGMGKDHTLFALVDGNVYFDRE 72          
BLAST of mRNA_H-paniculata_contig1635.3635.1 vs. uniprot
Match: G2KRH3_MICAA (50S ribosomal protein L27 n=2 Tax=Micavibrio aeruginosavorus TaxID=349221 RepID=G2KRH3_MICAA)

HSP 1 Score: 93.6 bits (231), Expect = 4.610e-22
Identity = 45/67 (67.16%), Postives = 56/67 (83.58%), Query Frame = 0
Query:   58 RRLGVKKFGGEAVIAGNIIMRQRGTQFHPGKNVGMGKDHTVFSLVTGHVLFKRDRFTKRRSIHVVKA 124
            RRLGVK++GGE V+AGNII+RQRGT++ PGKNVGMGKDHT+F+LV G VLF   R T RR +++V A
Sbjct:   19 RRLGVKRYGGEEVLAGNIIVRQRGTEYFPGKNVGMGKDHTLFALVDGEVLFSHGR-TGRRMVNIVPA 84          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1635.3635.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KD88_9PHAE4.150e-3558.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJF8_ECTSI1.520e-3467.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
E0UQT2_SULAO3.140e-2370.1550S ribosomal protein L27 n=9 Tax=root TaxID=1 Rep... [more]
A0A2D7TDH5_9PROT7.040e-2374.1450S ribosomal protein L27 n=2 Tax=Alphaproteobacte... [more]
A0A2E3XGZ2_9PROT1.260e-2276.3650S ribosomal protein L27 n=1 Tax=Rhodospirillacea... [more]
A0A7N0SZT4_KALFE1.630e-2257.65Uncharacterized protein n=2 Tax=Kalanchoe fedtsche... [more]
A0A6B8KIL0_9HYPH2.680e-2271.6450S ribosomal protein L27 n=1 Tax=Methylocystis he... [more]
A0A2E5J5L1_9RICK3.690e-2279.2550S ribosomal protein L27 n=1 Tax=Rickettsiales ba... [more]
UPI00190800A63.900e-2277.7850S ribosomal protein L27 n=2 Tax=Roseibacillus Ta... [more]
G2KRH3_MICAA4.610e-2267.1650S ribosomal protein L27 n=2 Tax=Micavibrio aerug... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 126..146
NoneNo IPR availableGENE3D2.40.50.1030coord: 45..140
e-value: 3.5E-29
score: 103.0
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..155
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..20
NoneNo IPR availablePRODOMPD003114coord: 67..121
e-value: 7.0E-15
score: 192.0
NoneNo IPR availableSUPERFAMILY110324Ribosomal L27 protein-likecoord: 41..121
IPR001684Ribosomal protein L27PRINTSPR00063RIBOSOMALL27coord: 68..92
score: 61.08
coord: 93..117
score: 37.23
coord: 43..67
score: 59.69
IPR001684Ribosomal protein L27TIGRFAMTIGR00062TIGR00062coord: 41..122
e-value: 1.4E-33
score: 112.7
IPR001684Ribosomal protein L27PFAMPF01016Ribosomal_L27coord: 41..121
e-value: 1.4E-34
score: 117.9
IPR001684Ribosomal protein L27PANTHERPTHR15893RIBOSOMAL PROTEIN L27coord: 6..143
IPR001684Ribosomal protein L27HAMAPMF_00539Ribosomal_L27coord: 40..124
score: 24.875
IPR018261Ribosomal protein L27, conserved sitePROSITEPS00831RIBOSOMAL_L27coord: 73..87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1635contigH-paniculata_contig1635:12901..14914 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1635.3635.1mRNA_H-paniculata_contig1635.3635.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1635 12142..14948 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1635.3635.1 ID=prot_H-paniculata_contig1635.3635.1|Name=mRNA_H-paniculata_contig1635.3635.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=156bp
MFSALMAAAVRQCSPATALAAIPSTSVSLFAGSICVAKRCASKAAAGSTT
NGRNSRGRRLGVKKFGGEAVIAGNIIMRQRGTQFHPGKNVGMGKDHTVFS
LVTGHVLFKRDRFTKRRSIHVVKAPVDHALLEAQKMENEAREARIRAASG
IYAKL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001684Ribosomal_L27
IPR018261Ribosomal_L27_CS