prot_H-paniculata_contig1616.3549.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1616.3549.1
Unique Nameprot_H-paniculata_contig1616.3549.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length61
Homology
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BLAST of mRNA_H-paniculata_contig1616.3549.1 vs. uniprot
Match: D7FHU9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHU9_ECTSI)

HSP 1 Score: 104 bits (259), Expect = 1.280e-24
Identity = 46/60 (76.67%), Postives = 51/60 (85.00%), Query Frame = 0 
Query:    2 VHTLRGVSTHALVPELALERVACSLDCRGLNRDPCWLEDNKCGECSEGFVGKAGHVNSLC 61
            VH LR VSTHA VPELALE++AC++DC GLNRD CWLE NKCGEC +GF GKAGHVNS C
Sbjct:  456 VHELRPVSTHAPVPELALEKIACAVDCPGLNRDACWLEANKCGECVDGFDGKAGHVNSPC 515
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1616.3549.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FHU9_ECTSI1.280e-2476.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1616contigH-paniculata_contig1616:1939..2121 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1616.3549.1mRNA_H-paniculata_contig1616.3549.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1616 1939..2121 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1616.3549.1 ID=prot_H-paniculata_contig1616.3549.1|Name=mRNA_H-paniculata_contig1616.3549.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=61bp
LVHTLRGVSTHALVPELALERVACSLDCRGLNRDPCWLEDNKCGECSEGF
VGKAGHVNSLC
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