prot_H-paniculata_contig15231.3083.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig15231.3083.1
Unique Name	prot_H-paniculata_contig15231.3083.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	237

Homology

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BLAST of mRNA_H-paniculata_contig15231.3083.1 vs. uniprot
Match: A0A8F0K175_9PHAE (Ribosomal protein S4 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0K175_9PHAE)

HSP 1 Score: 414 bits (1065), Expect = 1.530e-145
Identity = 197/236 (83.47%), Postives = 219/236 (92.80%), Query Frame = 0

Query:    1 MKFKSRYKSCLWSRKDVWGTLLKKKNTFLRVKWDRMMAILSSQQRRKIGKKLCKDYSLVKPSTRPNQVYNHVRWGFRNSLSNRLCARRFYGDISHKSFRKLCKVNNTGQLCQTLESRLDINLYRLEFFTSIYSSRQAILHGKILVNNKKVTFGHFFLKFGDVIEFCPSFRPFVYDYLRQRSKYRFKSDRLIKLSARWVLCDYSNLFFIINGPIKPFLFYPYRFDLDELISFANYGY 236
            MKFKSRYKSCLW+RKDVWG LLKKK+TFLRVKWDRMMAILSSQ+RR+ GK  CKDY +VKPS+R NQVYN+VRWGFRNSL NRLCARRFYGD+SHKSFRKLCKV++  +L Q LESRLDINL RLEFF+SIY SRQAILHGKILVNNKKVTFGHF LKFGD++EFCPSFRPF++DYL  RSK+R++SDRLI+LS+RWVLCDYSNLFFIING IKPFLFYPYRF+LDELISFANYGY
Sbjct:    1 MKFKSRYKSCLWARKDVWGNLLKKKHTFLRVKWDRMMAILSSQRRRRRGKP-CKDYGIVKPSSRSNQVYNYVRWGFRNSLGNRLCARRFYGDVSHKSFRKLCKVDSVRELAQVLESRLDINLCRLEFFSSIYCSRQAILHGKILVNNKKVTFGHFLLKFGDIVEFCPSFRPFMHDYLVYRSKFRYRSDRLIRLSSRWVLCDYSNLFFIINGSIKPFLFYPYRFELDELISFANYGY 235

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BLAST of mRNA_H-paniculata_contig15231.3083.1 vs. uniprot
Match: A0A4Y5T8N1_9PHAE (Ribosomal protein S4 n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A4Y5T8N1_9PHAE)

HSP 1 Score: 253 bits (645), Expect = 1.270e-81
Identity = 125/237 (52.74%), Postives = 168/237 (70.89%), Query Frame = 0

Query:    1 MKFKSRYKSCLWSRKDVWGTLLKKKNTFLRVKWDRMMAILSSQQRRKIGKKLCKDYSLVKPSTRPNQVYNHVRWGFRNSLSNRLCARRFYGDISHKSFRKLCKVNNTGQLCQTLESRLDINLYRLEFFTSIYSSRQAILHGKILVNNKKVTFGHFFLKFGDVIEFCPSFRPFVYDYLRQRSKYRFKSDRL-IKLSARWVLCDYSNLFFIINGPIKPFLFYPYRFDLDELISFANYGY 236
            MKFK+RYKSCLWS+ D+WG LLK++N+FLRVKWDR++  L S++RR+  ++LCKDY LVKPS+RPNQ Y   RW FRNSLSNRLC RRFYGD+S K+ ++LC++    +  ++LESRLDINLYRL F  S+Y S+QAILHGK+LVN +K+TF  F L+ GD++EF  +FR  +   +  R       DRL +  +  W+  DY +L FI  G I   +FYP+R + DE+   + Y Y
Sbjct:    1 MKFKARYKSCLWSKTDIWGGLLKRRNSFLRVKWDRIIGTLISKKRRR-HQRLCKDYRLVKPSSRPNQPYKFPRWAFRNSLSNRLCLRRFYGDLSSKTVQRLCRIKKNKKFIRSLESRLDINLYRLGFLGSVYESKQAILHGKVLVNGRKITFDQFLLQSGDIVEFSSNFRSSIRSGILSRRCGINYVDRLRVHPTPDWLHTDYCSLSFIFVGDITFSMFYPFRVEFDEIRCSSRYKY 236

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BLAST of mRNA_H-paniculata_contig15231.3083.1 vs. uniprot
Match: Q2TUD0_DICDH (Ribosomal protein S4 n=1 Tax=Dictyota dichotoma TaxID=2876 RepID=Q2TUD0_DICDH)

HSP 1 Score: 252 bits (643), Expect = 2.640e-81
Identity = 126/238 (52.94%), Postives = 167/238 (70.17%), Query Frame = 0

Query:    1 MKFKSRYKSCLWSRKDVWGTLLKKKNTFLRVKWDRMMAILSSQQRRKIGKKLCKDYSLVKPSTRPNQVYNHVRWGFRNSLSNRLCARRFYGDISHKSFRKLC-KVNNTGQLCQTLESRLDINLYRLEFFTSIYSSRQAILHGKILVNNKKVTFGHFFLKFGDVIEFCPSFRPFVYDYLRQRSKYRFKSDRL-IKLSARWVLCDYSNLFFIINGPIKPFLFYPYRFDLDELISFANYGY 236
            MKFKS YKSC WS+ D+WG LLKKKN+FL VKWDR++ +LSS++RR+  +KLCK+Y+LV P++RPNQ Y + RW F+NSLSN +C RRFYGD+  +  + +C K        + LESRL INLYRL FF+S++ S+QAILHGK+LVN  K+TF H+ LK GD+IEFCP FR  +   +  R K    SDRL +  +  W+  DYSNL FII       +FYP+R D DE+++ + Y Y
Sbjct:    1 MKFKSIYKSCFWSKTDIWGCLLKKKNSFLHVKWDRILGVLSSRKRRRY-QKLCKNYNLVGPTSRPNQPYKYPRWYFKNSLSNGVCVRRFYGDLRFEMLKSMCNKAKTVDSFMKCLESRLGINLYRLGFFSSVFESKQAILHGKVLVNGVKITFDHYILKPGDLIEFCPKFRSKLKSRMITRRKNINYSDRLKLNPTPFWIQTDYSNLSFIILCETNNAVFYPFRIDFDEVLNSSKYRY 237

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BLAST of mRNA_H-paniculata_contig15231.3083.1 vs. uniprot
Match: A0A8F0FC93_9PHAE (Ribosomal protein S4 n=2 Tax=Ecklonia TaxID=105406 RepID=A0A8F0FC93_9PHAE)

HSP 1 Score: 236 bits (601), Expect = 1.520e-74
Identity = 125/264 (47.35%), Postives = 164/264 (62.12%), Query Frame = 0

Query:    1 MKFKSRYKSCLWSRKDVWGTLLKKKNTFLRVKWDRMMAILSSQQRR--------KIGKKLCKDYSLVKPSTRPNQVYNHVRWGFRNSLSNRLCARRFYGDISHKSFRKLCKVNNTGQ-----LCQTLESRLDINLYRLEFFTSIYSSRQAILHGKILVNNKKVTFGHFFLKFGDVIEFCPS---------------FRPFVYDYLRQRSKYRFKSDRLIKLSARWVLCDYSNLFFIINGPIKPFLFYPYRFDLDELISFANYGY 236
            M+FK RYKSCLW+R D+WG LL K+ TFLR KWD ++ +LSSQ+RR        +    LC DY+ +KP  RPNQ++ + R  +RN+LS  +C +RFYGD+S K+F+  CK   +G+     L + LE RLDI LYRL FF SIY SRQAILH ++LVN KK+ +G F L+ GD +EFCPS               FR F     R R   RFK D  +  + +W+  DYSNL F I+  + P +FYP+R DLDE I  + YGY
Sbjct:    1 MRFKHRYKSCLWARTDIWGDLLSKEKTFLRPKWDSIIGVLSSQKRRHRPLTNINRYRYPLCHDYNFLKPRVRPNQIFKYNRVSYRNTLSLLMCVKRFYGDLSTKTFKIFCKRLGSGKIPSKKLIEVLEGRLDICLYRLGFFHSIYYSRQAILHSQVLVNGKKIDYGGFILQKGDYVEFCPSQRNAIRVRLVARYKRFRSFYIKLERWRLSNRFKFDLHLHPTPKWIHTDYSNLSFFISADVCPPIFYPFRVDLDEAIWASKYGY 264

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BLAST of mRNA_H-paniculata_contig15231.3083.1 vs. uniprot
Match: A0A8F0K0K8_9PHAE (Ribosomal protein S4 n=3 Tax=Laminariales TaxID=2886 RepID=A0A8F0K0K8_9PHAE)

HSP 1 Score: 231 bits (590), Expect = 7.040e-73
Identity = 126/264 (47.73%), Postives = 163/264 (61.74%), Query Frame = 0

Query:    1 MKFKSRYKSCLWSRKDVWGTLLKKKNTFLRVKWDRMMAILSSQQRR--------KIGKKLCKDYSLVKPSTRPNQVYNHVRWGFRNSLSNRLCARRFYGDISHKSFRKLCKV-----NNTGQLCQTLESRLDINLYRLEFFTSIYSSRQAILHGKILVNNKKVTFGHFFLKFGDVIEFCPSFRP-----FVYDYLRQRSKY----------RFKSDRLIKLSARWVLCDYSNLFFIINGPIKPFLFYPYRFDLDELISFANYGY 236
            M+FK RYKSCLWSR D+WG LL K  TFLR KWD ++ +LSSQ+RR        +    LC DY+ +KP  RPNQ++ + R  +RN+LS  LC RRFYGD++HK+F+  CK      N   +L   LE RLD++LYRL FF SIY SRQAILH K+LVN K++  G F L+ GD +EFCPS R       V  Y R RS Y          RFK D  +  + +WV  DYSNL FI++  +   + YP+R D+DE +  + YGY
Sbjct:    1 MRFKHRYKSCLWSRTDIWGDLLSKDKTFLRPKWDSIIGVLSSQKRRHRPLANINRYRYPLCHDYNFLKPRVRPNQIFKYNRISYRNTLSLLLCIRRFYGDLNHKAFKNFCKSLVSLKNPPQKLIGALEGRLDVSLYRLGFFHSIYYSRQAILHSKVLVNGKRIGHGGFILQKGDFVEFCPSQRSSIRARLVGRYKRFRSSYVKLERWRLSNRFKFDLHLHPTPKWVQTDYSNLSFIMSSDVCVPVIYPFRVDVDEALWCSKYGY 264

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BLAST of mRNA_H-paniculata_contig15231.3083.1 vs. uniprot
Match: A0A516ICH2_9PHAE (Ribosomal protein S4 n=3 Tax=Lessonia TaxID=105411 RepID=A0A516ICH2_9PHAE)

HSP 1 Score: 231 bits (588), Expect = 1.410e-72
Identity = 119/264 (45.08%), Postives = 166/264 (62.88%), Query Frame = 0

Query:    1 MKFKSRYKSCLWSRKDVWGTLLKKKNTFLRVKWDRMMAILSSQQRR--------KIGKKLCKDYSLVKPSTRPNQVYNHVRWGFRNSLSNRLCARRFYGDISHKSFRKLCK-----VNNTGQLCQTLESRLDINLYRLEFFTSIYSSRQAILHGKILVNNKKVTFGHFFLKFGDVIEFCPS---------------FRPFVYDYLRQRSKYRFKSDRLIKLSARWVLCDYSNLFFIINGPIKPFLFYPYRFDLDELISFANYGY 236
            M+FK RYKSCLWS+ D+WG LL K+ TFLR KWD ++ +L SQ+RR        +    LC DY+ +KP  RPNQ++ + + G++N+L+  LC RRFYGD+SHK F++ C+      + + +L ++LE RLDI+LYRL FF SIY SRQAILH K+LVN KK+ +G F L+ GD IEFCPS               FR F     R R   RFK +  ++ +  W+  DYSNL F+++  +   + YP+R D+DE +  + YGY
Sbjct:    1 MRFKHRYKSCLWSKTDIWGDLLSKEKTFLRPKWDNIIGVLESQKRRHRPLANINRYRHPLCHDYNFLKPRVRPNQIFKYNKVGYKNTLAILLCVRRFYGDLSHKGFKRFCQPLVAFTDPSQKLIKSLERRLDISLYRLGFFHSIYYSRQAILHNKVLVNGKKIGYGGFILQKGDFIEFCPSQRSAIKTRLMARYKRFRSFHVKLERWRLSNRFKFELHLQPTPTWIQTDYSNLSFMLSSDVCVPVLYPFRVDIDEALWASKYGY 264

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BLAST of mRNA_H-paniculata_contig15231.3083.1 vs. uniprot
Match: W5RG02_COSCS (Ribosomal protein S4 n=9 Tax=Laminariales TaxID=2886 RepID=W5RG02_COSCS)

HSP 1 Score: 231 bits (588), Expect = 1.410e-72
Identity = 123/264 (46.59%), Postives = 163/264 (61.74%), Query Frame = 0

Query:    1 MKFKSRYKSCLWSRKDVWGTLLKKKNTFLRVKWDRMMAILSSQQRR--------KIGKKLCKDYSLVKPSTRPNQVYNHVRWGFRNSLSNRLCARRFYGDISHKSFRKLCKV-----NNTGQLCQTLESRLDINLYRLEFFTSIYSSRQAILHGKILVNNKKVTFGHFFLKFGDVIEFCPS---------------FRPFVYDYLRQRSKYRFKSDRLIKLSARWVLCDYSNLFFIINGPIKPFLFYPYRFDLDELISFANYGY 236
            M+FK RYKSCLWSR D+WG LL K+ TFLR KWD ++ +L SQ+RR        +    LC DY+ VKP  RPNQ++ + R  +RN+LS  LC RRFYGD+SHK+F++ C+          +L  +LE RLDI+LYRL FF SIY SRQAILH K+LVN +K+ +G F L+ GD +EFCPS               FR F     R R   RFK +  +  + +WV  DYSNL FI++  I   + YP+R D+DE +  + YG+
Sbjct:    1 MRFKHRYKSCLWSRTDIWGDLLSKEKTFLRPKWDSIIGVLGSQKRRHRPLANINRYRHPLCHDYNFVKPRVRPNQIFKYNRLSYRNTLSLLLCIRRFYGDLSHKAFKRFCQPLVSLKTPAQKLIGSLEGRLDISLYRLGFFHSIYYSRQAILHNKVLVNGEKIGYGGFILQKGDFVEFCPSQRSAIRARLVARYKRFRSFHVKLERWRLSNRFKFELYLYPTPKWVQTDYSNLSFILSSDICAPVMYPFRVDVDEALWASRYGH 264

[Close]

BLAST of mRNA_H-paniculata_contig15231.3083.1 vs. uniprot
Match: A0A8F0JZU7_9PHAE (Ribosomal protein S4 n=1 Tax=Dictyoneurum californicum TaxID=169784 RepID=A0A8F0JZU7_9PHAE)

HSP 1 Score: 230 bits (587), Expect = 2.000e-72
Identity = 123/264 (46.59%), Postives = 162/264 (61.36%), Query Frame = 0

Query:    1 MKFKSRYKSCLWSRKDVWGTLLKKKNTFLRVKWDRMMAILSSQQRR--------KIGKKLCKDYSLVKPSTRPNQVYNHVRWGFRNSLSNRLCARRFYGDISHKSFRKLCKV-----NNTGQLCQTLESRLDINLYRLEFFTSIYSSRQAILHGKILVNNKKVTFGHFFLKFGDVIEFCPS---------------FRPFVYDYLRQRSKYRFKSDRLIKLSARWVLCDYSNLFFIINGPIKPFLFYPYRFDLDELISFANYGY 236
            M+FK +YKSCLW R D+WG LL K+ TFLR KWD ++ +L SQ+RR        +    LC DY+ VKP  RPNQ++ + R  +RN+LS  LC RRFYGD+SHK+F+K C+      N T  L  +LE RLDI+LYRL FF SIY SRQAILH K+LVN KK+  G F L+ GD +EFC S               FR F     R R   RFK +  ++ + +W+  DYSNL FI++  +   + YP+R D+DE +  + YGY
Sbjct:    1 MRFKHKYKSCLWLRTDIWGDLLSKEKTFLRPKWDSIIGVLGSQKRRHRPLANINRYRHPLCHDYNFVKPRVRPNQIFKYNRISYRNTLSLLLCIRRFYGDLSHKAFKKFCRPLVSLKNPTKNLIGSLEGRLDISLYRLGFFHSIYYSRQAILHNKVLVNGKKIADGGFILQKGDYVEFCFSQRSAIRARLVARYKRFRSFYVKLERWRLSNRFKFELHLQPTPKWIQTDYSNLSFILSSNVCAPVIYPFRVDIDEALWASKYGY 264

[Close]

BLAST of mRNA_H-paniculata_contig15231.3083.1 vs. uniprot
Match: A0A3G5FPT6_9PHAE (Ribosomal protein S4 n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A3G5FPT6_9PHAE)

HSP 1 Score: 226 bits (576), Expect = 9.250e-71
Identity = 120/264 (45.45%), Postives = 170/264 (64.39%), Query Frame = 0

Query:    1 MKFKSRYKSCLWSRKDVWGTLLKKKNTFLRVKWDRMMAILSSQQRR--------KIGKKLCKDYSLVKPSTRPNQVYNHVRWGFRNSLSNRLCARRFYGDISHKSFRKLCKV-----NNTGQLCQTLESRLDINLYRLEFFTSIYSSRQAILHGKILVNNKKVTFGHFFLKFGDVIEFCPSFRP-----FVYDYLRQRSK----------YRFKSDRLIKLSARWVLCDYSNLFFIINGPIKPFLFYPYRFDLDELISFANYGY 236
            M+FK+RYKSCLWSR ++WG LL K++TFLR KWD ++AIL SQ+RR        +    +C +Y L+KP TR NQV+ + R+G+RN+LS   C RRFYGD+SHK F+  CK      + + +L  +LE RLD++LYRL FF SIY SRQAILH K+LVN +K+ +G F L+ GD++EFCP+ R       V  Y R RS           +R+K +  ++ + +W+  DYSNL FI++  +   + YP+R + DE +  + YGY
Sbjct:    1 MRFKNRYKSCLWSRTNIWGDLLAKEHTFLRPKWDTIIAILRSQRRRHRPLVNIYRYRHPICHNYKLLKPRTRANQVFKYNRFGYRNTLSLVFCLRRFYGDLSHKGFKNFCKPFFKLRDPSQRLLSSLEGRLDMSLYRLGFFHSIYYSRQAILHNKVLVNGEKIGYGSFILQKGDLVEFCPTQRSAIRARLVARYKRFRSSMVRLERSNLSHRYKLELHLQPTPKWIQTDYSNLSFILSSDVCVPIVYPFRANFDEALWASKYGY 264

[Close]

BLAST of mRNA_H-paniculata_contig15231.3083.1 vs. uniprot
Match: A0A8F0FCX2_9PHAE (Ribosomal protein S4 n=2 Tax=Laminariales TaxID=2886 RepID=A0A8F0FCX2_9PHAE)

HSP 1 Score: 226 bits (576), Expect = 9.250e-71
Identity = 121/264 (45.83%), Postives = 163/264 (61.74%), Query Frame = 0

Query:    1 MKFKSRYKSCLWSRKDVWGTLLKKKNTFLRVKWDRMMAILSSQQRR--------KIGKKLCKDYSLVKPSTRPNQVYNHVRWGFRNSLSNRLCARRFYGDISHKSFRKLCKV-----NNTGQLCQTLESRLDINLYRLEFFTSIYSSRQAILHGKILVNNKKVTFGHFFLKFGDVIEFCPSFRPFVYDYLRQRSKY---------------RFKSDRLIKLSARWVLCDYSNLFFIINGPIKPFLFYPYRFDLDELISFANYGY 236
            M+FK RYKSCLWSR D+WG LL K+ TFLR KWD +M IL SQ+RR        +    LC DY  +KP  R NQ++ + R G+RN+LS   C RRFYGD+SHKSF+K C+      + + +L   LE RLDI LYRL FF SI+ SRQAILH K+LVN +K+ +G F L+ GD +EFCP  RP +   L  R K+               RFK +  ++ + +W+  DYSNL FI++  +   + +P+R D+DE +  + YGY
Sbjct:    1 MRFKHRYKSCLWSRTDIWGDLLGKEKTFLRPKWDTIMGILGSQKRRHRPLVNINRYRYPLCHDYKFLKPRARANQIFKYNRRGYRNTLSLLFCLRRFYGDLSHKSFKKFCRSMFALKDPSQKLLGALEGRLDITLYRLGFFHSIFYSRQAILHHKVLVNGEKIGYGGFILQKGDYVEFCPLQRPAIRARLLARYKHFRSAEVRLERWRLSPRFKYELHLQPTPKWIHTDYSNLSFILSSEVCVPIMFPFRADVDEALWASKYGY 264

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig15231.3083.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig15231.3083.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A8F0K175_9PHAE	1.530e-145	83.47	Ribosomal protein S4 n=1 Tax=Protohalopteris sp. T...	[more]
A0A4Y5T8N1_9PHAE	1.270e-81	52.74	Ribosomal protein S4 n=1 Tax=Dictyopteris divarica...	[more]
Q2TUD0_DICDH	2.640e-81	52.94	Ribosomal protein S4 n=1 Tax=Dictyota dichotoma Ta...	[more]
A0A8F0FC93_9PHAE	1.520e-74	47.35	Ribosomal protein S4 n=2 Tax=Ecklonia TaxID=105406...	[more]
A0A8F0K0K8_9PHAE	7.040e-73	47.73	Ribosomal protein S4 n=3 Tax=Laminariales TaxID=28...	[more]
A0A516ICH2_9PHAE	1.410e-72	45.08	Ribosomal protein S4 n=3 Tax=Lessonia TaxID=105411...	[more]
W5RG02_COSCS	1.410e-72	46.59	Ribosomal protein S4 n=9 Tax=Laminariales TaxID=28...	[more]
A0A8F0JZU7_9PHAE	2.000e-72	46.59	Ribosomal protein S4 n=1 Tax=Dictyoneurum californ...	[more]
A0A3G5FPT6_9PHAE	9.250e-71	45.45	Ribosomal protein S4 n=1 Tax=Cladosiphon okamuranu...	[more]
A0A8F0FCX2_9PHAE	9.250e-71	45.83	Ribosomal protein S4 n=2 Tax=Laminariales TaxID=28...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002942	RNA-binding S4 domain	SMART	SM00363	s4_6	coord: 116..178 e-value: 3.3E-10 score: 49.9
IPR002942	RNA-binding S4 domain	PFAM	PF01479	S4	coord: 117..163 e-value: 3.8E-9 score: 36.1
IPR002942	RNA-binding S4 domain	PROSITE	PS50889	S4	coord: 116..177 score: 12.297
IPR036986	RNA-binding S4 domain superfamily	GENE3D	3.10.290.10		coord: 117..210 e-value: 5.7E-14 score: 54.0
IPR005709	Ribosomal protein S4, bacterial-type	PANTHER	PTHR11831:SF4	37S RIBOSOMAL PROTEIN NAM9, MITOCHONDRIAL	coord: 99..171
IPR022801	Ribosomal protein S4/S9	PANTHER	PTHR11831	30S 40S RIBOSOMAL PROTEIN	coord: 99..171
None	No IPR available	SUPERFAMILY	55174	Alpha-L RNA-binding motif	coord: 32..208

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig15231	contig	H-paniculata_contig15231:5455..6165 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig15231.3083.1	mRNA_H-paniculata_contig15231.3083.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig15231 5455..6165 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig15231.3083.1 ID=prot_H-paniculata_contig15231.3083.1|Name=mRNA_H-paniculata_contig15231.3083.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=237bp
MKFKSRYKSCLWSRKDVWGTLLKKKNTFLRVKWDRMMAILSSQQRRKIGK
KLCKDYSLVKPSTRPNQVYNHVRWGFRNSLSNRLCARRFYGDISHKSFRK
LCKVNNTGQLCQTLESRLDINLYRLEFFTSIYSSRQAILHGKILVNNKKV
TFGHFFLKFGDVIEFCPSFRPFVYDYLRQRSKYRFKSDRLIKLSARWVLC
DYSNLFFIINGPIKPFLFYPYRFDLDELISFANYGY*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002942	S4_RNA-bd
IPR036986	S4_RNA-bd_sf
IPR005709	Ribosomal_S4_bac-type
IPR022801	Ribosomal_S4/S9