prot_H-paniculata_contig15129.3034.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig15129.3034.1
Unique Nameprot_H-paniculata_contig15129.3034.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length78
Homology
BLAST of mRNA_H-paniculata_contig15129.3034.1 vs. uniprot
Match: A0A6H5K466_9PHAE (Adaptin_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K466_9PHAE)

HSP 1 Score: 150 bits (378), Expect = 3.070e-41
Identity = 67/70 (95.71%), Postives = 69/70 (98.57%), Query Frame = 0
Query:    8 VCNALRNDLNHPNEYVRGCTLRFLCKLREPELLEPLIPTVKLCLEHRHSYVRRNAALSCYYIHKNFGQQV 77
            VCNALRNDLNHPNEYVRGCTLRFLCKLREPELLEPLIPTVKLCLEHRHSYVRRNAAL CYY+HKNFGQQ+
Sbjct:  100 VCNALRNDLNHPNEYVRGCTLRFLCKLREPELLEPLIPTVKLCLEHRHSYVRRNAALLCYYVHKNFGQQL 169          
BLAST of mRNA_H-paniculata_contig15129.3034.1 vs. uniprot
Match: D7G7C5_ECTSI (Coatomer subunit beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7C5_ECTSI)

HSP 1 Score: 150 bits (378), Expect = 2.250e-40
Identity = 67/70 (95.71%), Postives = 69/70 (98.57%), Query Frame = 0
Query:    8 VCNALRNDLNHPNEYVRGCTLRFLCKLREPELLEPLIPTVKLCLEHRHSYVRRNAALSCYYIHKNFGQQV 77
            VCNALRNDLNHPNEYVRGCTLRFLCKLREPELLEPLIPTVKLCLEHRHSYVRRNAAL CYY+HKNFGQQ+
Sbjct:  100 VCNALRNDLNHPNEYVRGCTLRFLCKLREPELLEPLIPTVKLCLEHRHSYVRRNAALLCYYVHKNFGQQL 169          
BLAST of mRNA_H-paniculata_contig15129.3034.1 vs. uniprot
Match: A0A835Z7E2_9STRA (Coatomer subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7E2_9STRA)

HSP 1 Score: 125 bits (314), Expect = 9.830e-32
Identity = 58/74 (78.38%), Postives = 64/74 (86.49%), Query Frame = 0
Query:    8 VCNALRNDLNHPNEYVRGCTLRFLCKLREPELLEPLIPTVKLCLEH----RHSYVRRNAALSCYYIHKNFGQQV 77
            VCNALRNDLNHPNEYVRG TLRFLC+LREPELLEPLIPTVK CL+     RH YVR+NAAL+CYYIHKNF + +
Sbjct:  101 VCNALRNDLNHPNEYVRGATLRFLCRLREPELLEPLIPTVKACLDGNGLGRHPYVRKNAALACYYIHKNFAETL 174          
BLAST of mRNA_H-paniculata_contig15129.3034.1 vs. uniprot
Match: A0A7S3JQR7_9STRA (Coatomer subunit beta n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JQR7_9STRA)

HSP 1 Score: 125 bits (313), Expect = 1.340e-31
Identity = 53/70 (75.71%), Postives = 64/70 (91.43%), Query Frame = 0
Query:    8 VCNALRNDLNHPNEYVRGCTLRFLCKLREPELLEPLIPTVKLCLEHRHSYVRRNAALSCYYIHKNFGQQV 77
            VCNALRNDLNH NEYVRGC LRFLCKLR+ E++EPL+P++KLCLEHRHSYVR+NAAL+ Y+IHK +GQ +
Sbjct:  101 VCNALRNDLNHSNEYVRGCMLRFLCKLRQAEIIEPLVPSIKLCLEHRHSYVRKNAALAIYHIHKYYGQNL 170          
BLAST of mRNA_H-paniculata_contig15129.3034.1 vs. uniprot
Match: F0YIR7_AURAN (Coatomer subunit beta n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YIR7_AURAN)

HSP 1 Score: 120 bits (301), Expect = 5.580e-30
Identity = 52/70 (74.29%), Postives = 62/70 (88.57%), Query Frame = 0
Query:    8 VCNALRNDLNHPNEYVRGCTLRFLCKLREPELLEPLIPTVKLCLEHRHSYVRRNAALSCYYIHKNFGQQV 77
            VCNALRNDLNH NEYVRG  LRFLCKLREPE++EPL+P++K CL HRHSYVR+NAAL+ Y+IHK+ GQ +
Sbjct:  100 VCNALRNDLNHSNEYVRGSMLRFLCKLREPEIIEPLVPSIKSCLNHRHSYVRKNAALAIYHIHKHHGQTL 169          
BLAST of mRNA_H-paniculata_contig15129.3034.1 vs. uniprot
Match: A0A7S0LEQ4_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LEQ4_9EUKA)

HSP 1 Score: 118 bits (295), Expect = 1.700e-29
Identity = 52/70 (74.29%), Postives = 61/70 (87.14%), Query Frame = 0
Query:    8 VCNALRNDLNHPNEYVRGCTLRFLCKLREPELLEPLIPTVKLCLEHRHSYVRRNAALSCYYIHKNFGQQV 77
            VCN LRNDLNHPNEY+RGCTLRFLCKL+EPE+LEPLIPT+K  LEHRHS+VRRNA LS + I+K+F   +
Sbjct:  100 VCNNLRNDLNHPNEYIRGCTLRFLCKLKEPEILEPLIPTIKANLEHRHSFVRRNAVLSVFSIYKSFDYLI 169          
BLAST of mRNA_H-paniculata_contig15129.3034.1 vs. uniprot
Match: A0A7S4E6E8_9STRA (Coatomer subunit beta n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E6E8_9STRA)

HSP 1 Score: 119 bits (297), Expect = 1.940e-29
Identity = 51/70 (72.86%), Postives = 61/70 (87.14%), Query Frame = 0
Query:    8 VCNALRNDLNHPNEYVRGCTLRFLCKLREPELLEPLIPTVKLCLEHRHSYVRRNAALSCYYIHKNFGQQV 77
            VCNALRNDLNH NEYVRG  LRFLCKLREPE++EPL+P++K CL HRHSYVR+NAAL+ Y+IHK+ G  +
Sbjct:  100 VCNALRNDLNHSNEYVRGSMLRFLCKLREPEIIEPLVPSIKACLNHRHSYVRKNAALAIYHIHKHHGSAL 169          
BLAST of mRNA_H-paniculata_contig15129.3034.1 vs. uniprot
Match: A0A8J5CRB5_CHIOP (Coatomer subunit beta n=1 Tax=Chionoecetes opilio TaxID=41210 RepID=A0A8J5CRB5_CHIOP)

HSP 1 Score: 112 bits (279), Expect = 2.940e-29
Identity = 48/66 (72.73%), Postives = 59/66 (89.39%), Query Frame = 0
Query:    8 VCNALRNDLNHPNEYVRGCTLRFLCKLREPELLEPLIPTVKLCLEHRHSYVRRNAALSCYYIHKNF 73
            VC+A R DL+HPNE++RG TLRFLCKL+EPELLEPL+PT++ CLEHRHSYVRRNA L+ + I+KNF
Sbjct:   42 VCDAYRKDLSHPNEFIRGSTLRFLCKLKEPELLEPLMPTIRTCLEHRHSYVRRNAVLAIFTIYKNF 107          
BLAST of mRNA_H-paniculata_contig15129.3034.1 vs. uniprot
Match: U9SY22_RHIID (Adaptin_N domain-containing protein (Fragment) n=1 Tax=Rhizophagus irregularis (strain DAOM 181602 / DAOM 197198 / MUCL 43194) TaxID=747089 RepID=U9SY22_RHIID)

HSP 1 Score: 113 bits (283), Expect = 3.990e-29
Identity = 49/66 (74.24%), Postives = 58/66 (87.88%), Query Frame = 0
Query:    8 VCNALRNDLNHPNEYVRGCTLRFLCKLREPELLEPLIPTVKLCLEHRHSYVRRNAALSCYYIHKNF 73
            VCNALRNDL HPNEY+RG TLRFLCKLREPELLEPL+P+ + CLEHRH+YVR+NA  + Y I+K+F
Sbjct:   99 VCNALRNDLQHPNEYIRGATLRFLCKLREPELLEPLLPSCRSCLEHRHAYVRKNAVFAIYTIYKHF 164          
BLAST of mRNA_H-paniculata_contig15129.3034.1 vs. uniprot
Match: W7TX10_9STRA (Coatomer subunit beta n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TX10_9STRA)

HSP 1 Score: 117 bits (292), Expect = 9.190e-29
Identity = 52/70 (74.29%), Postives = 60/70 (85.71%), Query Frame = 0
Query:    8 VCNALRNDLNHPNEYVRGCTLRFLCKLREPELLEPLIPTVKLCLEHRHSYVRRNAALSCYYIHKNFGQQV 77
            VCNALRNDLNHPNEYVRG  LRFLCKLREP+LLEPLIP++K CLEHRHSYVR+NAAL+   IH++    +
Sbjct:  109 VCNALRNDLNHPNEYVRGSMLRFLCKLREPDLLEPLIPSIKACLEHRHSYVRKNAALAILNIHRHVSSDL 178          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig15129.3034.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K466_9PHAE3.070e-4195.71Adaptin_N domain-containing protein n=1 Tax=Ectoca... [more]
D7G7C5_ECTSI2.250e-4095.71Coatomer subunit beta n=1 Tax=Ectocarpus siliculos... [more]
A0A835Z7E2_9STRA9.830e-3278.38Coatomer subunit beta n=1 Tax=Tribonema minus TaxI... [more]
A0A7S3JQR7_9STRA1.340e-3175.71Coatomer subunit beta n=1 Tax=Aureoumbra lagunensi... [more]
F0YIR7_AURAN5.580e-3074.29Coatomer subunit beta n=1 Tax=Aureococcus anophage... [more]
A0A7S0LEQ4_9EUKA1.700e-2974.29Hypothetical protein (Fragment) n=1 Tax=Coccolithu... [more]
A0A7S4E6E8_9STRA1.940e-2972.86Coatomer subunit beta n=3 Tax=Pelagomonas calceola... [more]
A0A8J5CRB5_CHIOP2.940e-2972.73Coatomer subunit beta n=1 Tax=Chionoecetes opilio ... [more]
U9SY22_RHIID3.990e-2974.24Adaptin_N domain-containing protein (Fragment) n=1... [more]
W7TX10_9STRA9.190e-2974.29Coatomer subunit beta n=3 Tax=Monodopsidaceae TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 5..77
e-value: 8.1E-25
score: 89.2
IPR002553Clathrin/coatomer adaptor, adaptin-like, N-terminalPFAMPF01602Adaptin_Ncoord: 8..74
e-value: 9.3E-21
score: 74.0
IPR016460Coatomer beta subunit (COPB1)PANTHERPTHR10635COATOMER SUBUNIT BETAcoord: 8..75
NoneNo IPR availablePANTHERPTHR10635:SF0COATOMER SUBUNIT BETAcoord: 8..75
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 8..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig15129contigH-paniculata_contig15129:5044..6027 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig15129.3034.1mRNA_H-paniculata_contig15129.3034.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig15129 5044..6033 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig15129.3034.1 ID=prot_H-paniculata_contig15129.3034.1|Name=mRNA_H-paniculata_contig15129.3034.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=78bp
MVVAAGQVCNALRNDLNHPNEYVRGCTLRFLCKLREPELLEPLIPTVKLC
LEHRHSYVRRNAALSCYYIHKNFGQQV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR002553Clathrin/coatomer_adapt-like_N
IPR016460COPB1
IPR016024ARM-type_fold