prot_H-paniculata_contig151.3026.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig151.3026.1
Unique Nameprot_H-paniculata_contig151.3026.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length72
Homology
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BLAST of mRNA_H-paniculata_contig151.3026.1 vs. uniprot
Match: D7FZS2_ECTSI (Ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZS2_ECTSI)

HSP 1 Score: 63.9 bits (154), Expect = 3.280e-10
Identity = 30/51 (58.82%), Postives = 35/51 (68.63%), Query Frame = 0 
Query:   12 GKGSNATFVDVVPFYNIRAKYLRPWGDTALSRPHHISAIP----DRTMASP 58
            G G    FVDVVPF NIRAKYLRPW DT LSRP+H++  P    DR + +P
Sbjct:  386 GGGGRGCFVDVVPFNNIRAKYLRPWNDTELSRPYHVAPSPTWRADRAVGTP 436
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BLAST of mRNA_H-paniculata_contig151.3026.1 vs. uniprot
Match: A0A6H5KP45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP45_9PHAE)

HSP 1 Score: 62.0 bits (149), Expect = 1.290e-9
Identity = 27/40 (67.50%), Postives = 30/40 (75.00%), Query Frame = 0 
Query:   12 GKGSNATFVDVVPFYNIRAKYLRPWGDTALSRPHHISAIP 51
            G G    FVDVVPF NIRAKYLRPW DT LSRP+H++  P
Sbjct:  204 GIGGRGCFVDVVPFNNIRAKYLRPWNDTELSRPYHVAPSP 243
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig151.3026.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FZS2_ECTSI3.280e-1058.82Ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5KP45_9PHAE1.290e-967.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig151contigH-paniculata_contig151:5114..5329 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig151.3026.1mRNA_H-paniculata_contig151.3026.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig151 5114..5330 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig151.3026.1 ID=prot_H-paniculata_contig151.3026.1|Name=mRNA_H-paniculata_contig151.3026.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=72bp
SGVEHLPSATDGKGSNATFVDVVPFYNIRAKYLRPWGDTALSRPHHISAI
PDRTMASPIRPISKDQSATPAV
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