prot_H-paniculata_contig14611.2767.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14611.2767.1
Unique Nameprot_H-paniculata_contig14611.2767.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length70
Homology
BLAST of mRNA_H-paniculata_contig14611.2767.1 vs. uniprot
Match: A0A4Y1R7U6_PRUDU (Transposable element protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1R7U6_PRUDU)

HSP 1 Score: 80.1 bits (196), Expect = 8.120e-17
Identity = 34/67 (50.75%), Postives = 51/67 (76.12%), Query Frame = 0
Query:    1 PVGRKAICTNWIFERNLKEDGSVARYKARLVAQGFSQVEGKDVFETSAPVAHMSTLRTVFSLATAHD 67
            P G KAI   W+F + LK DGS+ +YKARLVA+GF+Q +G D F+T +PV+ ++T+RT+ +LA+ H+
Sbjct:   31 PAGNKAIGCKWVFRKKLKPDGSIDKYKARLVAKGFTQKKGIDYFDTYSPVSRITTIRTLIALASVHN 97          
BLAST of mRNA_H-paniculata_contig14611.2767.1 vs. uniprot
Match: A0A6P9F263_JUGRE (uncharacterized mitochondrial protein AtMg00820-like n=1 Tax=Juglans regia TaxID=51240 RepID=A0A6P9F263_JUGRE)

HSP 1 Score: 77.0 bits (188), Expect = 9.280e-17
Identity = 35/63 (55.56%), Postives = 47/63 (74.60%), Query Frame = 0
Query:    1 PVGRKAICTNWIFERNLKEDGSVARYKARLVAQGFSQVEGKDVFETSAPVAHMSTLRTVFSLA 63
            P G+K I   W+F+  LK DGS+ RYKARLVA+G++QVEG D  ET APVA M+T+R + ++A
Sbjct:   20 PPGKKPIGCKWVFKTKLKADGSIERYKARLVAKGYTQVEGLDYHETFAPVAKMTTVRCLLAIA 82          
BLAST of mRNA_H-paniculata_contig14611.2767.1 vs. uniprot
Match: UPI001CA468C4 (hypothetical protein n=1 Tax=Xylella fastidiosa TaxID=2371 RepID=UPI001CA468C4)

HSP 1 Score: 77.4 bits (189), Expect = 1.340e-16
Identity = 34/66 (51.52%), Postives = 50/66 (75.76%), Query Frame = 0
Query:    1 PVGRKAICTNWIFERNLKEDGSVARYKARLVAQGFSQVEGKDVFETSAPVAHMSTLRTVFSLATAH 66
            P G KAI   WIF++ +K DG++ ++KARLVA+GF+Q EG D F+T APVA +ST+R + ++A+ H
Sbjct:   12 PPGSKAIGCKWIFKKKMKVDGTIDKFKARLVAKGFTQKEGIDYFDTYAPVARISTIRVLLAIASIH 77          
BLAST of mRNA_H-paniculata_contig14611.2767.1 vs. uniprot
Match: A0A392PGT3_9FABA (Putative retroelement pol polyprotein (Fragment) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392PGT3_9FABA)

HSP 1 Score: 79.7 bits (195), Expect = 2.000e-16
Identity = 36/65 (55.38%), Postives = 50/65 (76.92%), Query Frame = 0
Query:    1 PVGRKAICTNWIFERNLKEDGSVARYKARLVAQGFSQVEGKDVFETSAPVAHMSTLRTVFSLATA 65
            PVG KAI   W+++   K DGS+ RYKARLVA+G++QVEG D FET +PVA M+T+R V ++A++
Sbjct:  165 PVGAKAIGRKWVYKIKRKSDGSIERYKARLVAKGYNQVEGIDYFETFSPVAKMTTIRVVLAIASS 229          
BLAST of mRNA_H-paniculata_contig14611.2767.1 vs. uniprot
Match: A0A4Y1RH61_PRUDU (Transposable element protein n=3 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1RH61_PRUDU)

HSP 1 Score: 80.1 bits (196), Expect = 5.900e-16
Identity = 34/67 (50.75%), Postives = 51/67 (76.12%), Query Frame = 0
Query:    1 PVGRKAICTNWIFERNLKEDGSVARYKARLVAQGFSQVEGKDVFETSAPVAHMSTLRTVFSLATAHD 67
            P G KAI   W+F + LK DGS+ +YKARLVA+GF+Q +G D F+T +PV+ ++T+RT+ +LA+ H+
Sbjct:    6 PAGNKAIGCKWVFRKKLKPDGSIDKYKARLVAKGFTQKKGIDYFDTYSPVSRITTIRTLIALASVHN 72          
BLAST of mRNA_H-paniculata_contig14611.2767.1 vs. uniprot
Match: A0A6L2M7G6_TANCI (Retrotransposon protein, putative, Ty1-copia subclass n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2M7G6_TANCI)

HSP 1 Score: 79.0 bits (193), Expect = 6.010e-16
Identity = 35/65 (53.85%), Postives = 48/65 (73.85%), Query Frame = 0
Query:    3 GRKAICTNWIFERNLKEDGSVARYKARLVAQGFSQVEGKDVFETSAPVAHMSTLRTVFSLATAHD 67
            G K +C  WIF+R +K DG+V ++KARLV QGF Q EG D F+T APVAH++T+R + +LA  H+
Sbjct:   37 GCKPLCCKWIFKRKMKVDGTVDKFKARLVIQGFRQKEGIDYFDTYAPVAHITTIRLLLALAALHN 101          
BLAST of mRNA_H-paniculata_contig14611.2767.1 vs. uniprot
Match: A0A4Y1RR86_PRUDU (Transposable element protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1RR86_PRUDU)

HSP 1 Score: 80.1 bits (196), Expect = 6.200e-16
Identity = 34/67 (50.75%), Postives = 51/67 (76.12%), Query Frame = 0
Query:    1 PVGRKAICTNWIFERNLKEDGSVARYKARLVAQGFSQVEGKDVFETSAPVAHMSTLRTVFSLATAHD 67
            P G KAI   W+F + LK DGS+ +YKARLVA+GF+Q +G D F+T +PV+ ++T+RT+ +LA+ H+
Sbjct:  248 PAGNKAIGCKWVFRKKLKPDGSIDKYKARLVAKGFTQKKGIDYFDTYSPVSRITTIRTLIALASVHN 314          
BLAST of mRNA_H-paniculata_contig14611.2767.1 vs. uniprot
Match: A0A5H2XR15_PRUDU (Transposable element protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A5H2XR15_PRUDU)

HSP 1 Score: 80.1 bits (196), Expect = 6.270e-16
Identity = 34/67 (50.75%), Postives = 51/67 (76.12%), Query Frame = 0
Query:    1 PVGRKAICTNWIFERNLKEDGSVARYKARLVAQGFSQVEGKDVFETSAPVAHMSTLRTVFSLATAHD 67
            P G KAI   W+F + LK DGS+ +YKARLVA+GF+Q +G D F+T +PV+ ++T+RT+ +LA+ H+
Sbjct:  467 PAGNKAIGCKWVFRKKLKPDGSIDKYKARLVAKGFTQKKGIDYFDTYSPVSRITTIRTLIALASVHN 533          
BLAST of mRNA_H-paniculata_contig14611.2767.1 vs. uniprot
Match: A0A5H2XL39_PRUDU (Transposable element protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A5H2XL39_PRUDU)

HSP 1 Score: 80.1 bits (196), Expect = 6.280e-16
Identity = 34/67 (50.75%), Postives = 51/67 (76.12%), Query Frame = 0
Query:    1 PVGRKAICTNWIFERNLKEDGSVARYKARLVAQGFSQVEGKDVFETSAPVAHMSTLRTVFSLATAHD 67
            P G KAI   W+F + LK DGS+ +YKARLVA+GF+Q +G D F+T +PV+ ++T+RT+ +LA+ H+
Sbjct:  541 PAGNKAIGCKWVFRKKLKPDGSIDKYKARLVAKGFTQKKGIDYFDTYSPVSRITTIRTLIALASVHN 607          
BLAST of mRNA_H-paniculata_contig14611.2767.1 vs. uniprot
Match: A0A5H2XTK7_PRUDU (CCHC-type domain-containing protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A5H2XTK7_PRUDU)

HSP 1 Score: 80.1 bits (196), Expect = 6.290e-16
Identity = 34/67 (50.75%), Postives = 51/67 (76.12%), Query Frame = 0
Query:    1 PVGRKAICTNWIFERNLKEDGSVARYKARLVAQGFSQVEGKDVFETSAPVAHMSTLRTVFSLATAHD 67
            P G KAI   W+F + LK DGS+ +YKARLVA+GF+Q +G D F+T +PV+ ++T+RT+ +LA+ H+
Sbjct:  796 PAGNKAIGCKWVFRKKLKPDGSIDKYKARLVAKGFTQKKGIDYFDTYSPVSRITTIRTLIALASVHN 862          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14611.2767.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4Y1R7U6_PRUDU8.120e-1750.75Transposable element protein n=1 Tax=Prunus dulcis... [more]
A0A6P9F263_JUGRE9.280e-1755.56uncharacterized mitochondrial protein AtMg00820-li... [more]
UPI001CA468C41.340e-1651.52hypothetical protein n=1 Tax=Xylella fastidiosa Ta... [more]
A0A392PGT3_9FABA2.000e-1655.38Putative retroelement pol polyprotein (Fragment) n... [more]
A0A4Y1RH61_PRUDU5.900e-1650.75Transposable element protein n=3 Tax=Prunus dulcis... [more]
A0A6L2M7G6_TANCI6.010e-1653.85Retrotransposon protein, putative, Ty1-copia subcl... [more]
A0A4Y1RR86_PRUDU6.200e-1650.75Transposable element protein n=1 Tax=Prunus dulcis... [more]
A0A5H2XR15_PRUDU6.270e-1650.75Transposable element protein n=1 Tax=Prunus dulcis... [more]
A0A5H2XL39_PRUDU6.280e-1650.75Transposable element protein n=1 Tax=Prunus dulcis... [more]
A0A5H2XTK7_PRUDU6.290e-1650.75CCHC-type domain-containing protein n=1 Tax=Prunus... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 1..66
e-value: 1.3E-14
score: 54.4
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 1..65
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 1..65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14611contigH-paniculata_contig14611:5602..5811 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14611.2767.1mRNA_H-paniculata_contig14611.2767.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14611 5602..5811 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14611.2767.1 ID=prot_H-paniculata_contig14611.2767.1|Name=mRNA_H-paniculata_contig14611.2767.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=70bp
PVGRKAICTNWIFERNLKEDGSVARYKARLVAQGFSQVEGKDVFETSAPV
AHMSTLRTVFSLATAHDSN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like