prot_H-paniculata_contig1438.2632.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1438.2632.1
Unique Nameprot_H-paniculata_contig1438.2632.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length477
Homology
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BLAST of mRNA_H-paniculata_contig1438.2632.1 vs. uniprot
Match: D8LBS2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBS2_ECTSI)

HSP 1 Score: 126 bits (316), Expect = 4.320e-28
Identity = 148/313 (47.28%), Postives = 182/313 (58.15%), Query Frame = 0 
Query:  156 AMGETGPAGADNDAQLAKLHLGIICNQGVAVRGGVGLGTAFSTGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLANKHQKAAAQAATDSARQLSVAHAHAGAIEFMIGNPAEAAMLFGRQLDEARKADDALLEAMAERNLADARELTSDLPGALRHLRRCLDLARSARNAAIEADTYRRISGIYALIAGVAAAHGLDEIDGGEAGDATPDEGKEEVGGVGKKDHLEDYGYDGMTEAAVYTRTCLTSPPAHSDSLQIEA-KEDEDVAFLRATASRRAHLFAERYEHAASGLAWPIGA 467
            A+G + PAG++N  Q+  L LG++ NQG+  RGG+G+G AFST +AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                               + M G P +AA  F  QL EA+ A D +LEA+AERNLAD RE+  DLPGAL HLRRC  LA+ +RN+A+EAD  RR+S +YA IAG +               +     + E GG        D+G DG       T+    S             +ED DV FL++TA+ RA LFAERYE A  GL WP+ +
Sbjct:   97 AVGVSVPAGSENSDQITALQLGVLGNQGLVARGGLGMGAAFST-SAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLMTGRPVQAAERFELQLKEAQNAGDPILEALAERNLADTREVDEDLPGALAHLRRCRALAQRSRNSALEADACRRLSSVYAEIAGQSGXXXXXXXXXXXXXXSP----EREKGG--------DHG-DGXXXXXXXTQERNRSDSGXXXXXXXXXXREDSDVEFLKSTAADRARLFAERYETAVFGLEWPVSS 395
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BLAST of mRNA_H-paniculata_contig1438.2632.1 vs. uniprot
Match: A0A6H5KC12_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC12_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 4.880e-11
Identity = 58/160 (36.25%), Postives = 80/160 (50.00%), Query Frame = 0 
Query:   83 AAATAAILISEGGQAGEGGVYLAQRINNAVLEGVAWSLAGGGTTDGV-------------------AALKRAERLTEKM-----------------------ATNDKTTSAPMSAAMGETGPAGADNDAQLAKLHLGIICNQGVAVRGGVGLGTAFSTGA 200
            AA  AA LI+ G +AG+ G +  Q++N A+LEG+AWSLAG G+ +G                    AA+KRAER  EK                        + +D   SA    A+G + PAG++N  Q+  L LG++  QG+  RGG G+G AFST A
Sbjct:   83 AAEKAAGLIAAGCKAGDLGAHPTQKMNGAMLEGLAWSLAGQGSAEGASLLFRGFVVGRRGEIGERAAAMKRAERGLEKFLDSEHRRPSVAASAAGVAKRSASSADDVPLSARAQEAVGVSVPAGSENSDQITALQLGVLGTQGLVARGGFGMGAAFSTSA 242
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1438.2632.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LBS2_ECTSI4.320e-2847.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KC12_9PHAE4.880e-1136.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 227..385
e-value: 2.1E-10
score: 41.8
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 249..360

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1438contigH-paniculata_contig1438:11032..15764 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1438.2632.1mRNA_H-paniculata_contig1438.2632.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1438 11032..15764 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1438.2632.1 ID=prot_H-paniculata_contig1438.2632.1|Name=mRNA_H-paniculata_contig1438.2632.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=477bp
AAEEADVGSRLRRSKSGALALEIANSCGLCRLEIGTQHLSIPRHGSNERS
YLHDEAEHTARSDAYDAKPSENSTGGEDSEGSAAATAAILISEGGQAGEG
GVYLAQRINNAVLEGVAWSLAGGGTTDGVAALKRAERLTEKMATNDKTTS
APMSAAMGETGPAGADNDAQLAKLHLGIICNQGVAVRGGVGLGTAFSTGA
AGSGSTRRTSAASGVTKDATATLAAVAAARLAARAANAGWREASLLANKH
QKAAAQAATDSARQLSVAHAHAGAIEFMIGNPAEAAMLFGRQLDEARKAD
DALLEAMAERNLADARELTSDLPGALRHLRRCLDLARSARNAAIEADTYR
RISGIYALIAGVAAAHGLDEIDGGEAGDATPDEGKEEVGGVGKKDHLEDY
GYDGMTEAAVYTRTCLTSPPAHSDSLQIEAKEDEDVAFLRATASRRAHLF
AERYEHAASGLAWPIGATMTNRQLVP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf