prot_H-paniculata_contig14378.2630.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14378.2630.1
Unique Nameprot_H-paniculata_contig14378.2630.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length80
Homology
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BLAST of mRNA_H-paniculata_contig14378.2630.1 vs. uniprot
Match: A0A6H5JKF8_9PHAE (Cnd1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKF8_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 6.040e-25
Identity = 53/80 (66.25%), Postives = 63/80 (78.75%), Query Frame = 0 
Query:    1 MLLELVTTPEMSAAIVGALHKLCFAKAASEKDGAIMCNAWANHALSTFEEVLHSFVYQGCGALTDHAGARACGFNMARLV 80
            ML +LV TPE SAA+V ALH LCFA+A +E+ GA MCN WAN AL+ FE++L  FVYQG  AL DH+GARACGF+MA LV
Sbjct:   54 MLQDLVATPETSAALVAALHMLCFAQATTEEAGAAMCNEWANSALTNFEQLLDVFVYQGSEALRDHSGARACGFDMAILV 133
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BLAST of mRNA_H-paniculata_contig14378.2630.1 vs. uniprot
Match: D7FP86_ECTSI (Cnd1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP86_ECTSI)

HSP 1 Score: 105 bits (263), Expect = 8.360e-25
Identity = 53/80 (66.25%), Postives = 63/80 (78.75%), Query Frame = 0 
Query:    1 MLLELVTTPEMSAAIVGALHKLCFAKAASEKDGAIMCNAWANHALSTFEEVLHSFVYQGCGALTDHAGARACGFNMARLV 80
            ML +LV TPE SAA+V ALH LCFA+A +E+ GA MCN WAN AL+ FE++L  FVYQG  AL DH+GARACGF+MA LV
Sbjct:  898 MLQDLVATPETSAALVAALHMLCFAQATTEEAGAAMCNEWANSALTKFEQLLDVFVYQGSEALRDHSGARACGFDMAILV 977
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14378.2630.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JKF8_9PHAE6.040e-2566.25Cnd1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FP86_ECTSI8.360e-2566.25Cnd1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14378contigH-paniculata_contig14378:2896..5708 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14378.2630.1mRNA_H-paniculata_contig14378.2630.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14378 2896..5708 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14378.2630.1 ID=prot_H-paniculata_contig14378.2630.1|Name=mRNA_H-paniculata_contig14378.2630.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=80bp
MLLELVTTPEMSAAIVGALHKLCFAKAASEKDGAIMCNAWANHALSTFEE
VLHSFVYQGCGALTDHAGARACGFNMARLV
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