prot_H-paniculata_contig1427.2588.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1427.2588.1
Unique Nameprot_H-paniculata_contig1427.2588.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length441
Homology
BLAST of mRNA_H-paniculata_contig1427.2588.1 vs. uniprot
Match: A0A6H5KS00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS00_9PHAE)

HSP 1 Score: 101 bits (251), Expect = 3.860e-19
Identity = 150/533 (28.14%), Postives = 202/533 (37.90%), Query Frame = 0
Query:    1 EGDLDALDDLLRRDAARDGGDHVSGLVSGNTANRPLQ--DDGFGALDDLLGLDDGPRR-PLSPSTXXXXXXXXXXXXXXQGADGGDMDVDPSAAMVDSSRPGDRDLARTATPLLPPAAVSNTQVPPTSTPAAGEK----------------DAEGEILGDWLDDLLSMEDERFTDPTGGGDRGMTP----------------------------GGRKVSGAEPAPATSWFDDIPDISPTAKTTDATPRRSIHETQGNNNDVPNPQSPQSVDDWLSDLLDEDDEDFDSRQPSAMGK------------------------RDGSSGGG-----------DSPLSDVITGSSALEGWKTQT-----APVRSNVMGRSGGGGRFGGNRRGARDQDDFGGTTGRGRGQGGRGRTKDYQESRQSGSDHWGGASSSSGGKWGHDAGGGDFGASYGSTDRGVVWDN------GLDDDAGRPRGDRSHGDYELNPTEMAQRAVTADLKMLGSRGRWEDALKALVGARMRGVPVNNFMYNT 440
            +G+LDALD  LRR+A             G  A       DDGF ALDDLLG++D P   P +P +                    D+D+DP A +     P   D        LP A  +  Q      P A                        +   WLDDLL +++E     +                                     G R  +     P T     IP  +P A T+ A                        +DDWL+DLL+ED+++ ++++ + + K                        ++G S G                 DV+TGS+ LEGWK  T     AP RSNVMGR             AR       +   G G    G ++ +    +SGS+   G  SS    WG     GD   S G +  GV W +      G+++  GR    R  G  EL+P E AQRA  ADLK LG RG+WEDA +ALVGAR+RGVPVN +MYN+
Sbjct:   97 DGNLDALDAQLRREAGP-----TQQQQQGQAAALAAAGFDDGFSALDDLLGVEDSPSASPRAPRSSRSN----------------DVDIDPFAKL---DSPVITDSLDDLLSELPAAPAAGNQAAAGRRPTAXXXXXXXXXXXXXXXXXXXSGTAAVSESWLDDLLDLDNENLEVSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGPRSAAKVPDRPVTGDAVPIPPSNP-ADTSAA------------------------LDDWLNDLLEEDNKNKNNQERTKLSKPAAPFQQEQRLRASLEDDPWDFAAKEGDSSGSFXXXXXXXXXXXXXXXDVVTGSNQLEGWKANTVSSADAPRRSNVMGRR------------ARGTGSSSTSGSPGGGAAAEGTSRPWDP--ESGSEEGAGGRSSD---WGT----GDAWKSKGES--GVSWWDKDGPGMGMEETTGR----RGQGKRELDPVEEAQRACAADLKKLGQRGQWEDATRALVGARVRGVPVNVYMYNS 553          
BLAST of mRNA_H-paniculata_contig1427.2588.1 vs. uniprot
Match: D8LU53_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU53_ECTSI)

HSP 1 Score: 80.9 bits (198), Expect = 1.070e-12
Identity = 40/67 (59.70%), Postives = 49/67 (73.13%), Query Frame = 0
Query:  374 GLDDDAGRPRGDRSHGDYELNPTEMAQRAVTADLKMLGSRGRWEDALKALVGARMRGVPVNNFMYNT 440
            G+++  GR    R  G  EL+P E AQRA  ADLK LG RG+WEDA +ALVGAR+RGVPVN +MYN+
Sbjct:   73 GMEEATGR----RGQGKRELDPVEEAQRACAADLKKLGQRGQWEDATRALVGARVRGVPVNVYMYNS 135          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1427.2588.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KS00_9PHAE3.860e-1928.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LU53_ECTSI1.070e-1259.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1427contigH-paniculata_contig1427:668..1990 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1427.2588.1mRNA_H-paniculata_contig1427.2588.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1427 668..1990 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1427.2588.1 ID=prot_H-paniculata_contig1427.2588.1|Name=mRNA_H-paniculata_contig1427.2588.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=441bp
EGDLDALDDLLRRDAARDGGDHVSGLVSGNTANRPLQDDGFGALDDLLGL
DDGPRRPLSPSTVSTLATSAPSGKIGQGADGGDMDVDPSAAMVDSSRPGD
RDLARTATPLLPPAAVSNTQVPPTSTPAAGEKDAEGEILGDWLDDLLSME
DERFTDPTGGGDRGMTPGGRKVSGAEPAPATSWFDDIPDISPTAKTTDAT
PRRSIHETQGNNNDVPNPQSPQSVDDWLSDLLDEDDEDFDSRQPSAMGKR
DGSSGGGDSPLSDVITGSSALEGWKTQTAPVRSNVMGRSGGGGRFGGNRR
GARDQDDFGGTTGRGRGQGGRGRTKDYQESRQSGSDHWGGASSSSGGKWG
HDAGGGDFGASYGSTDRGVVWDNGLDDDAGRPRGDRSHGDYELNPTEMAQ
RAVTADLKMLGSRGRWEDALKALVGARMRGVPVNNFMYNT*
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