prot_H-paniculata_contig14249.2577.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14249.2577.1
Unique Nameprot_H-paniculata_contig14249.2577.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length143
Homology
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BLAST of mRNA_H-paniculata_contig14249.2577.1 vs. uniprot
Match: D7FR48_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR48_ECTSI)

HSP 1 Score: 84.7 bits (208), Expect = 3.040e-18
Identity = 58/145 (40.00%), Postives = 79/145 (54.48%), Query Frame = 0 
Query:    1 DVAERTLDSLSNSCRGELQAALERPSPSPLTPVCRTEVGSLL---GHQSRGEELPQKTKGDGQRVKSVPIQDEGIGPESSPAGAHPAHPATIVLSFVMCALVVFAAIGYYVSGGGGLNGRQPTRHDKRLHKKKNDRPRERGKKRR 142
            DVAERT++S S++CR  L+ ALE+P+ S L+  C  EVG +L    H   G   P++  G  +     P +    G ++     H    AT+VL+FV   LV   A+ Y  S G      +P R  +RLHKKK +R RERGKKRR
Sbjct:    5 DVAERTIESTSSACRYRLEEALEQPAGS-LSAACEAEVGRILDAKAHHKAGAGKPRR--GGDKSGTDAPTKSSRTGSKNEQTEDHGTQAATVVLTFVSLVLVAVVALAYCASVG------RPKRGGRRLHKKKQERIRERGKKRR 140
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14249.2577.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FR48_ECTSI3.040e-1840.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 109..142
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 87..108
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..86
NoneNo IPR availableTMHMMTMhelixcoord: 89..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14249contigH-paniculata_contig14249:1978..3670 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14249.2577.1mRNA_H-paniculata_contig14249.2577.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14249 1694..3670 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14249.2577.1 ID=prot_H-paniculata_contig14249.2577.1|Name=mRNA_H-paniculata_contig14249.2577.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=143bp
DVAERTLDSLSNSCRGELQAALERPSPSPLTPVCRTEVGSLLGHQSRGEE
LPQKTKGDGQRVKSVPIQDEGIGPESSPAGAHPAHPATIVLSFVMCALVV
FAAIGYYVSGGGGLNGRQPTRHDKRLHKKKNDRPRERGKKRR*
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