prot_H-paniculata_contig14224.2565.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14224.2565.1
Unique Nameprot_H-paniculata_contig14224.2565.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length158
Homology
BLAST of mRNA_H-paniculata_contig14224.2565.1 vs. uniprot
Match: A0A6H5KCG6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCG6_9PHAE)

HSP 1 Score: 136 bits (342), Expect = 8.220e-37
Identity = 70/130 (53.85%), Postives = 88/130 (67.69%), Query Frame = 0
Query:   28 GRRTLDGEESVVDVPFREVVGTLMWNAKQTGRDIAKAVRAAARFSHDPKKIHWEAACKLLDYQKATAHLGLTFRREGGIDMSVVLDFFFYDANYASKATDKRSVSGAAVLCVGSSVAWYSEIQKCSISTT 157
            G R+L  EE   DVPFREVVG+LMW A QT  DI+ AVRA AR SH+PKK HW+AA K+L+Y   TAHL L F+R+  +D+  ++   + DA++ASKATD+RSVSGA V      V W S  QKC   +T
Sbjct:   21 GGRSLMEEEGAGDVPFREVVGSLMWIASQTRADISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKRDSSVDVGTLV---YVDADFASKATDRRSVSGAMVFVAAMLVVWISRTQKCVSQST 147          
BLAST of mRNA_H-paniculata_contig14224.2565.1 vs. uniprot
Match: A0A6H5L8G9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8G9_9PHAE)

HSP 1 Score: 135 bits (339), Expect = 1.940e-36
Identity = 70/134 (52.24%), Postives = 88/134 (65.67%), Query Frame = 0
Query:   24 PLGVGRRTLDGEESVVDVPFREVVGTLMWNAKQTGRDIAKAVRAAARFSHDPKKIHWEAACKLLDYQKATAHLGLTFRREGGIDMSVVLDFFFYDANYASKATDKRSVSGAAVLCVGSSVAWYSEIQKCSISTT 157
            PL V  R++   E   DVPFREVVG LMW A QT  DI+ AVRA AR SH+PK  HW+AA K+L+Y   TAHL L F+R+  +D+  ++   + DA++ASKATD+RSVSGA V   G  V W S  QKC   +T
Sbjct:    9 PLPVVNRSVMENEEAGDVPFREVVGCLMWIASQTRPDISNAVRAVARHSHEPKLSHWKAAPKVLNYLLGTAHLSLNFKRDSSVDVGTLV---YVDADFASKATDRRSVSGALVFVAGMLVVWTSRTQKCVAQST 139          
BLAST of mRNA_H-paniculata_contig14224.2565.1 vs. uniprot
Match: A0A6H5KP70_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP70_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 3.080e-34
Identity = 69/135 (51.11%), Postives = 89/135 (65.93%), Query Frame = 0
Query:   24 PLGVGRRTLDGEESVVDVPFREVVGTLMWNAKQTGRDIAKAVRAAARFSHDPKKIHWEAACKLLDYQKATAHLGLTFRREGGIDMSVVLDFFFYDANYASKATDKRSVSGAAVLCVGSSVAWYSEIQKC-SISTT 157
            P+ V     D  E+  DVPFRE+VG+LMW A QT  DIA AVRA AR+   PK +HW+AA  +L Y + T+ +G+TF R     MS+ +   F DA+YASKATD+RSVSG  V+C G  V W+S  QKC ++STT
Sbjct:   81 PVSVKLTDFDENEACADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQV---FVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTT 212          
BLAST of mRNA_H-paniculata_contig14224.2565.1 vs. uniprot
Match: A0A6H5JX86_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX86_9PHAE)

HSP 1 Score: 136 bits (342), Expect = 3.840e-34
Identity = 79/164 (48.17%), Postives = 101/164 (61.59%), Query Frame = 0
Query:    3 HLDVEQAFIQSYLDKRLFFGFPLGVGRRT------LDGEESVVDVPFREVVGTLMWNAKQTGRDIAKAVRAAARFSHDPKKIHWEAACKLLDYQKATAHLGLTFRREG--GIDMSVVLDFFFYDANYASKATDKRSVSGAAVLCVGSSVAWYSEIQKC-SISTT 157
            H D++QAF+QS LD+ +F   P G GR +       D +E VV  PFRE++G+LM  A QT  DIA AVRA A++    K+IHW A   +L Y   T+  G+TFRR    G+ M V     F DA+YASKA DKRSVSG  V+C G  V+W+S  QKC  +STT
Sbjct:  749 HFDIKQAFVQSDLDEDVFMRLPEGCGRLSGLKLSEFDQDEEVVSWPFRELIGSLMLLATQTRPDIANAVRAVAQYCASLKEIHWRAGRGILGYVVRTSDTGITFRRGSVAGLSMEV-----FADADYASKAADKRSVSGGLVICWGGCVSWFSRTQKCVPLSTT 907          
BLAST of mRNA_H-paniculata_contig14224.2565.1 vs. uniprot
Match: A0A6H5JTK6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTK6_9PHAE)

HSP 1 Score: 129 bits (323), Expect = 1.140e-33
Identity = 69/137 (50.36%), Postives = 89/137 (64.96%), Query Frame = 0
Query:   24 PLGVGRRTLDGEESVVDVPFREVVGTLMWNAKQTGRDIAKAVRAAARFSHDPKKIHWEAACKLLDYQKATAHLGLTFRREG--GIDMSVVLDFFFYDANYASKATDKRSVSGAAVLCVGSSVAWYSEIQKC-SISTT 157
            P+G+     D +E VV  PFRE++G+LMW A QT  DIA AVRA AR+   PK+IHW A   +L Y   T+ LG+TFRR    G+ M V     F DA+YASKA D+RSVSG  V+C G  ++W+S  QKC ++STT
Sbjct:   14 PVGLKLSEFDQDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEV-----FADADYASKAADRRSVSGGLVMCGGGCMSWFSRTQKCVTLSTT 145          
BLAST of mRNA_H-paniculata_contig14224.2565.1 vs. uniprot
Match: A0A6H5L4G9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4G9_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 1.260e-33
Identity = 69/135 (51.11%), Postives = 89/135 (65.93%), Query Frame = 0
Query:   24 PLGVGRRTLDGEESVVDVPFREVVGTLMWNAKQTGRDIAKAVRAAARFSHDPKKIHWEAACKLLDYQKATAHLGLTFRREGGIDMSVVLDFFFYDANYASKATDKRSVSGAAVLCVGSSVAWYSEIQKC-SISTT 157
            P+ V     D  E+  DVPFRE+VG+LMW A QT  DIA AVRA AR+   PK +HW+AA  +L Y + T+ +G+TF R     MS+ +   F DA+YASKATD+RSVSG  V+C G  V W+S  QKC ++STT
Sbjct:  136 PVSVKLTDFDENEASADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQV---FVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTT 267          
BLAST of mRNA_H-paniculata_contig14224.2565.1 vs. uniprot
Match: A0A6H5L3I1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3I1_9PHAE)

HSP 1 Score: 134 bits (338), Expect = 1.350e-33
Identity = 69/128 (53.91%), Postives = 87/128 (67.97%), Query Frame = 0
Query:   30 RTLDGEESVVDVPFREVVGTLMWNAKQTGRDIAKAVRAAARFSHDPKKIHWEAACKLLDYQKATAHLGLTFRREGGIDMSVVLDFFFYDANYASKATDKRSVSGAAVLCVGSSVAWYSEIQKCSISTT 157
            R+L  EE   DVPFREVVG+LMW A QT  DI+ AVRA AR SH+PKK HW+AA K+L+Y   TAHL L F+R+  +D+  ++   + DA++ASKATD+RSVSGA V      V W S  QKC   +T
Sbjct:  956 RSLMEEEGAGDVPFREVVGSLMWIASQTRADISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKRDSSVDVGTLV---YVDADFASKATDRRSVSGAMVFVAAMLVVWISRTQKCVSQST 1080          
BLAST of mRNA_H-paniculata_contig14224.2565.1 vs. uniprot
Match: A0A6H5KZH7_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH7_9PHAE)

HSP 1 Score: 134 bits (338), Expect = 1.370e-33
Identity = 69/128 (53.91%), Postives = 87/128 (67.97%), Query Frame = 0
Query:   30 RTLDGEESVVDVPFREVVGTLMWNAKQTGRDIAKAVRAAARFSHDPKKIHWEAACKLLDYQKATAHLGLTFRREGGIDMSVVLDFFFYDANYASKATDKRSVSGAAVLCVGSSVAWYSEIQKCSISTT 157
            R+L  EE   DVPFREVVG+LMW A QT  DI+ AVRA AR SH+PKK HW+AA K+L+Y   TAHL L F+R+  +D+  ++   + DA++ASKATD+RSVSGA V      V W S  QKC   +T
Sbjct: 1166 RSLMEEEGAGDVPFREVVGSLMWIASQTRADISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKRDSSVDVGTLV---YVDADFASKATDRRSVSGAMVFVAAMLVVWISRTQKCVSQST 1290          
BLAST of mRNA_H-paniculata_contig14224.2565.1 vs. uniprot
Match: A0A6H5JEF2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=7 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEF2_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 2.430e-33
Identity = 69/135 (51.11%), Postives = 89/135 (65.93%), Query Frame = 0
Query:   24 PLGVGRRTLDGEESVVDVPFREVVGTLMWNAKQTGRDIAKAVRAAARFSHDPKKIHWEAACKLLDYQKATAHLGLTFRREGGIDMSVVLDFFFYDANYASKATDKRSVSGAAVLCVGSSVAWYSEIQKC-SISTT 157
            P+ V     D  E+  DVPFRE+VG+LMW A QT  DIA AVRA AR+   PK +HW+AA  +L Y + T+ +G+TF R     MS+ +   F DA+YASKATD+RSVSG  V+C G  V W+S  QKC ++STT
Sbjct:  198 PVSVKLTDFDENEACADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQV---FVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTT 329          
BLAST of mRNA_H-paniculata_contig14224.2565.1 vs. uniprot
Match: A0A6H5JW47_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW47_9PHAE)

HSP 1 Score: 126 bits (317), Expect = 2.500e-33
Identity = 65/122 (53.28%), Postives = 81/122 (66.39%), Query Frame = 0
Query:   36 ESVVDVPFREVVGTLMWNAKQTGRDIAKAVRAAARFSHDPKKIHWEAACKLLDYQKATAHLGLTFRREGGIDMSVVLDFFFYDANYASKATDKRSVSGAAVLCVGSSVAWYSEIQKCSISTT 157
            E   DVPFREVVG LMW A QT  DI+ AVRA AR SH+PK  HW+AA K+L+Y   TAHL L F+R+  +D+  ++   +  A++ASKATD+RSVSGA V   G  V W S  QKC   +T
Sbjct:    4 EEAGDVPFREVVGCLMWIACQTRPDISNAVRAVARHSHEPKLSHWKAAQKILNYLLGTAHLSLNFKRDSSVDVGTLV---YVAADFASKATDRRSVSGALVFVAGMLVVWTSRTQKCVAQST 122          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14224.2565.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KCG6_9PHAE8.220e-3753.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L8G9_9PHAE1.940e-3652.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KP70_9PHAE3.080e-3451.11Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JX86_9PHAE3.840e-3448.17Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JTK6_9PHAE1.140e-3350.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L4G9_9PHAE1.260e-3351.11Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L3I1_9PHAE1.350e-3353.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZH7_9PHAE1.370e-3353.91Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JEF2_9PHAE2.430e-3351.11Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JW47_9PHAE2.500e-3353.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14224contigH-paniculata_contig14224:2066..2957 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14224.2565.1mRNA_H-paniculata_contig14224.2565.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14224 1322..3813 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14224.2565.1 ID=prot_H-paniculata_contig14224.2565.1|Name=mRNA_H-paniculata_contig14224.2565.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=158bp
MSHLDVEQAFIQSYLDKRLFFGFPLGVGRRTLDGEESVVDVPFREVVGTL
MWNAKQTGRDIAKAVRAAARFSHDPKKIHWEAACKLLDYQKATAHLGLTF
RREGGIDMSVVLDFFFYDANYASKATDKRSVSGAAVLCVGSSVAWYSEIQ
KCSISTT*
back to top