prot_H-paniculata_contig14223.2564.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14223.2564.1
Unique Nameprot_H-paniculata_contig14223.2564.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length229
Homology
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BLAST of mRNA_H-paniculata_contig14223.2564.1 vs. uniprot
Match: D7FQI7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQI7_ECTSI)

HSP 1 Score: 150 bits (380), Expect = 4.060e-41
Identity = 133/234 (56.84%), Postives = 151/234 (64.53%), Query Frame = 0 
Query:    2 VNTSGGGLWTPLHYASDGQ--------ECPELVATLIHRGADIHAPDHHGRTPLHIACQRGSCDVALALLEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNATNCWGQIAGTLAPAYKMNPNPTSNRKQQGSVGQGLVRDERGGDGAGDASVPPCVACSARDGRHYYFCKNEILQELPESLILGPDGLPIVD 227
             N SGGG WTPLHYA +G            +LV TL+    ++ A D +GRTPLH+AC +GS  VALALLEA      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                 P A NCWG++AGTLAP YKMNP               +V DE       DA   PC+ACSA  GRHYYFC++EILQELP+S++LGPDG P V+
Sbjct:   71 ANVSGGGFWTPLHYACNGPCRGTAAAAAAAKLVTTLVANHGEVDATDFYGRTPLHLACSKGSAAVALALLEAGAEPNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRERQSLAMSLLESAGADPGAKNCWGELAGTLAPDYKMNP---------------VVHDEE----HQDADTGPCIACSATKGRHYYFCRSEILQELPDSMVLGPDGKPRVE 285
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BLAST of mRNA_H-paniculata_contig14223.2564.1 vs. uniprot
Match: A0A6H5JVF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVF4_9PHAE)

HSP 1 Score: 143 bits (360), Expect = 4.170e-38
Identity = 146/234 (62.39%), Postives = 164/234 (70.09%), Query Frame = 0 
Query:    2 VNTSGGGLWTPLHYASDGQ--------ECPELVATLIHRGADIHAPDHHGRTPLHIACQRGSCDVALALLEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNATNCWGQIAGTLAPAYKMNPNPTSNRKQQGSVGQGLVRDERGGDGAGDASVPPCVACSARDGRHYYFCKNEILQELPESLILGPDGLPIVD 227
             N SGGG WTPLHYA +G            ELV TL+    D+ A D +GRTPLH+AC +GS  VALA    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      P A NCWG++AGTLAP YKMNP               +V DE       DA   PC+ACSA  GRHYYFC++E+LQ+LP+S++LGPDG P V+
Sbjct:   74 ANVSGGGCWTPLHYACNGPCRGSAAATAAAELVTTLVENHGDVDATDFYGRTPLHLACSKGSAAVALAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESAGADPAAKNCWGELAGTLAPDYKMNP---------------VVHDEE----HQDADTGPCMACSATKGRHYYFCRSEVLQDLPDSMVLGPDGKPRVE 288
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14223.2564.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FQI7_ECTSI4.060e-4156.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JVF4_9PHAE4.170e-3862.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 124..138
score: 37.42
coord: 43..58
score: 41.76
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 108..137
e-value: 0.0051
score: 26.0
coord: 8..38
e-value: 0.4
score: 19.7
coord: 75..104
e-value: 7.8E-4
score: 28.7
coord: 42..71
e-value: 6.2E-5
score: 32.4
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 10..40
e-value: 2.6E-4
score: 21.3
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 11..41
score: 9.831
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 75..107
score: 12.289
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 42..74
score: 12.903
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 108..140
score: 10.659
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..79
e-value: 8.4E-22
score: 79.4
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 80..155
e-value: 2.5E-18
score: 68.0
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 3..151
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 62..139
e-value: 3.8E-11
score: 43.4
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 11..140
score: 41.115
NoneNo IPR availablePANTHERPTHR24119FAMILY NOT NAMEDcoord: 65..163
NoneNo IPR availablePANTHERPTHR24119:SF0ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 6coord: 65..163
NoneNo IPR availablePANTHERPTHR24119FAMILY NOT NAMEDcoord: 40..106
coord: 11..75
NoneNo IPR availablePANTHERPTHR24119:SF0ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 6coord: 40..106
NoneNo IPR availablePANTHERPTHR24119:SF0ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 6coord: 11..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14223contigH-paniculata_contig14223:1965..3923 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14223.2564.1mRNA_H-paniculata_contig14223.2564.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14223 1927..4607 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14223.2564.1 ID=prot_H-paniculata_contig14223.2564.1|Name=mRNA_H-paniculata_contig14223.2564.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=229bp
MVNTSGGGLWTPLHYASDGQECPELVATLIHRGADIHAPDHHGRTPLHIA
CQRGSCDVALALLEASANANESDHDERTPVHYAASMGRHEIIALLLGFSA
DVSAADRELETPLHKATRGGYHRVMNLLQRAGADPNATNCWGQIAGTLAP
AYKMNPNPTSNRKQQGSVGQGLVRDERGGDGAGDASVPPCVACSARDGRH
YYFCKNEILQELPESLILGPDGLPIVDR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom