prot_H-paniculata_contig14203.2558.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14203.2558.1
Unique Nameprot_H-paniculata_contig14203.2558.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length79
Homology
BLAST of mRNA_H-paniculata_contig14203.2558.1 vs. uniprot
Match: UPI0015A81C6A (uncharacterized mitochondrial protein AtMg00820-like n=1 Tax=Stegodyphus dumicola TaxID=202533 RepID=UPI0015A81C6A)

HSP 1 Score: 89.4 bits (220), Expect = 6.380e-21
Identity = 44/77 (57.14%), Postives = 56/77 (72.73%), Query Frame = 0
Query:    2 EKWRAAMEEEWGTLVKNGTWESEDLGRLPAGRKGIRAKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDFFETSAP 78
            EKW+ AMEEE   L +N TW   D+   P GRK ++ KW+FKRKL +DG V RYKARLVA+G++QVEG D+ ET +P
Sbjct:   44 EKWKLAMEEELENLKRNETW---DIVPRPEGRKVVKCKWVFKRKLNKDGQVERYKARLVARGYTQVEGIDYKETFSP 117          
BLAST of mRNA_H-paniculata_contig14203.2558.1 vs. uniprot
Match: A0A182GIT5_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GIT5_AEDAL)

HSP 1 Score: 92.0 bits (227), Expect = 5.210e-20
Identity = 46/77 (59.74%), Postives = 56/77 (72.73%), Query Frame = 0
Query:    2 EKWRAAMEEEWGTLVKNGTWESEDLGRLPAGRKGIRAKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDFFETSAP 78
            E W+AAM++E  +L +NGTW+  D   LP GRK +  KWIFKRKL EDG+V RYKARLVAQGF+Q  G D+ E  AP
Sbjct:    7 ELWKAAMDDEMTSLRENGTWQLTD---LPPGRKAVGCKWIFKRKLDEDGNVVRYKARLVAQGFTQKFGTDYDEVFAP 80          
BLAST of mRNA_H-paniculata_contig14203.2558.1 vs. uniprot
Match: A0A151SEK1_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151SEK1_CAJCA)

HSP 1 Score: 85.9 bits (211), Expect = 1.910e-19
Identity = 41/75 (54.67%), Postives = 54/75 (72.00%), Query Frame = 0
Query:    4 WRAAMEEEWGTLVKNGTWESEDLGRLPAGRKGIRAKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDFFETSAP 78
            W+ AM++E+  L+KN TW   DL  LP GR  I  KWIFK K K+DGS+ R+KARLVA+GFSQ +G D+ +T +P
Sbjct:   33 WKQAMQDEYNALLKNHTW---DLVSLPPGRTAITCKWIFKNKYKQDGSILRHKARLVARGFSQQQGLDYTDTFSP 104          
BLAST of mRNA_H-paniculata_contig14203.2558.1 vs. uniprot
Match: A0A251UM92_HELAN (Putative reverse transcriptase, RNA-dependent DNA polymerase, Gag-polypeptide of LTR copia-type n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251UM92_HELAN)

HSP 1 Score: 89.0 bits (219), Expect = 7.030e-19
Identity = 43/77 (55.84%), Postives = 55/77 (71.43%), Query Frame = 0
Query:    2 EKWRAAMEEEWGTLVKNGTWESEDLGRLPAGRKGIRAKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDFFETSAP 78
            EKWR AM++E   L KNGTW  E+   LP G++   +KW++K K K DG V RYKARLVA+GF+Q+EG D+ ET AP
Sbjct:  450 EKWRNAMQQEIKALEKNGTWTLEE---LPEGKRPTDSKWVYKTKFKSDGEVERYKARLVAKGFTQMEGVDYHETFAP 523          
BLAST of mRNA_H-paniculata_contig14203.2558.1 vs. uniprot
Match: Q45W64_PHACR (Polyprotein n=1 Tax=Phanerochaete chrysosporium (strain RP-78 / ATCC MYA-4764 / FGSC 9002) TaxID=273507 RepID=Q45W64_PHACR)

HSP 1 Score: 89.0 bits (219), Expect = 7.090e-19
Identity = 41/76 (53.95%), Postives = 55/76 (72.37%), Query Frame = 0
Query:    3 KWRAAMEEEWGTLVKNGTWESEDLGRLPAGRKGIRAKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDFFETSAP 78
            +W+AAM+ E   L  NGTW+    G LP GRK I +KW+F  K  +DGS+ +YKARLVAQGFSQ+ G+D+F+T +P
Sbjct:  846 QWKAAMDAEMAQLEANGTWKK---GELPPGRKAIGSKWVFAIKRHQDGSIDKYKARLVAQGFSQIAGQDYFDTFSP 918          
BLAST of mRNA_H-paniculata_contig14203.2558.1 vs. uniprot
Match: A0A5B7CAQ6_DAVIN (Putative Polyprotein (Fragment) n=1 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B7CAQ6_DAVIN)

HSP 1 Score: 82.4 bits (202), Expect = 8.930e-19
Identity = 42/77 (54.55%), Postives = 52/77 (67.53%), Query Frame = 0
Query:    2 EKWRAAMEEEWGTLVKNGTWESEDLGRLPAGRKGIRAKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDFFETSAP 78
            + WR A+++E  +L  NGTWE  D   LP   K I  KWI K+KLK DGSV +YKARLVA+GF Q E  DFF+T +P
Sbjct:   10 DSWREAIQDEMDSLKSNGTWELVD---LPPSCKTIGCKWILKKKLKPDGSVDKYKARLVAKGFRQKENIDFFDTYSP 83          
BLAST of mRNA_H-paniculata_contig14203.2558.1 vs. uniprot
Match: A0A060BT00_9BACT (RVT_2 (Fragment) n=1 Tax=uncultured bacterium TaxID=77133 RepID=A0A060BT00_9BACT)

HSP 1 Score: 82.8 bits (203), Expect = 9.150e-19
Identity = 36/75 (48.00%), Postives = 54/75 (72.00%), Query Frame = 0
Query:    4 WRAAMEEEWGTLVKNGTWESEDLGRLPAGRKGIRAKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDFFETSAP 78
            W+ A+  E  +++ NGTWE  +    P G K +  KW+FK+KL+ DG++ +YKARLVA+G++Q EGEDFF+T +P
Sbjct:   19 WKEAVRSEMDSIIANGTWEVTE---RPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSP 90          
BLAST of mRNA_H-paniculata_contig14203.2558.1 vs. uniprot
Match: A0A151QQX0_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151QQX0_CAJCA)

HSP 1 Score: 86.7 bits (213), Expect = 1.260e-18
Identity = 41/75 (54.67%), Postives = 55/75 (73.33%), Query Frame = 0
Query:    4 WRAAMEEEWGTLVKNGTWESEDLGRLPAGRKGIRAKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDFFETSAP 78
            W+ AM++E+  L+KN TW   DL  LP GRK I  KWIFK K K+DGS+ R+KARLVA+GF+Q +G D+ +T +P
Sbjct:   33 WKQAMQDEYNALMKNYTW---DLVSLPPGRKAITCKWIFKNKYKQDGSILRHKARLVARGFNQQQGIDYTDTFSP 104          
BLAST of mRNA_H-paniculata_contig14203.2558.1 vs. uniprot
Match: UPI0007729B35 (uncharacterized protein LOC107261307 n=1 Tax=Ricinus communis TaxID=3988 RepID=UPI0007729B35)

HSP 1 Score: 87.8 bits (216), Expect = 1.750e-18
Identity = 44/77 (57.14%), Postives = 54/77 (70.13%), Query Frame = 0
Query:    2 EKWRAAMEEEWGTLVKNGTWESEDLGRLPAGRKGIRAKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDFFETSAP 78
            + WR AME E   L KNGTW   DL  LP  +K I  KW+FK KLK DG+V R+KARLVA+GF Q+EG D+FE+ +P
Sbjct:  495 QSWRLAMENELQALEKNGTW---DLVELPTDKKAIGCKWVFKLKLKPDGTVDRHKARLVAKGFHQLEGIDYFESFSP 568          
BLAST of mRNA_H-paniculata_contig14203.2558.1 vs. uniprot
Match: A0A6P8EKB2_PUNGR (uncharacterized protein LOC116214508 n=2 Tax=Punica granatum TaxID=22663 RepID=A0A6P8EKB2_PUNGR)

HSP 1 Score: 87.8 bits (216), Expect = 1.780e-18
Identity = 44/76 (57.89%), Postives = 53/76 (69.74%), Query Frame = 0
Query:    3 KWRAAMEEEWGTLVKNGTWESEDLGRLPAGRKGIRAKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDFFETSAP 78
            +WR AM EE   L  NGTW  ED   LP G++ I  KW++K K + DGS+ RYKARLVA+GF+QVEG DF ET AP
Sbjct:  761 RWRQAMAEEIKALESNGTWTVED---LPPGKRPIACKWVYKIKRRADGSIERYKARLVAKGFTQVEGVDFNETFAP 833          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14203.2558.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0015A81C6A6.380e-2157.14uncharacterized mitochondrial protein AtMg00820-li... [more]
A0A182GIT5_AEDAL5.210e-2059.74Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A151SEK1_CAJCA1.910e-1954.67Retrovirus-related Pol polyprotein from transposon... [more]
A0A251UM92_HELAN7.030e-1955.84Putative reverse transcriptase, RNA-dependent DNA ... [more]
Q45W64_PHACR7.090e-1953.95Polyprotein n=1 Tax=Phanerochaete chrysosporium (s... [more]
A0A5B7CAQ6_DAVIN8.930e-1954.55Putative Polyprotein (Fragment) n=1 Tax=Davidia in... [more]
A0A060BT00_9BACT9.150e-1948.00RVT_2 (Fragment) n=1 Tax=uncultured bacterium TaxI... [more]
A0A151QQX0_CAJCA1.260e-1854.67Retrovirus-related Pol polyprotein from transposon... [more]
UPI0007729B351.750e-1857.14uncharacterized protein LOC107261307 n=1 Tax=Ricin... [more]
A0A6P8EKB2_PUNGR1.780e-1857.89uncharacterized protein LOC116214508 n=2 Tax=Punic... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 26..78
e-value: 2.3E-13
score: 50.3
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 2..78
NoneNo IPR availablePANTHERPTHR11439:SF264coord: 2..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14203contigH-paniculata_contig14203:6484..6720 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14203.2558.1mRNA_H-paniculata_contig14203.2558.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14203 5966..6759 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14203.2558.1 ID=prot_H-paniculata_contig14203.2558.1|Name=mRNA_H-paniculata_contig14203.2558.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=79bp
MEKWRAAMEEEWGTLVKNGTWESEDLGRLPAGRKGIRAKWIFKRKLKEDG
SVARYKARLVAQGFSQVEGEDFFETSAP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like