mRNA_H-paniculata_contig14203.2558.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig14203.2558.1
Unique NamemRNA_H-paniculata_contig14203.2558.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig14203.2558.1 vs. uniprot
Match: H3H934_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H934_PHYRM)

HSP 1 Score: 132 bits (333), Expect = 1.430e-33
Identity = 68/177 (38.42%), Postives = 114/177 (64.41%), Query Frame = 3
Query:  270 PIARMSTLRTVFSLAA*HDFELQDMDVESACLNAPVEEVLFVKLPSDSSHFS*DIP-FVRRLRKILYGFKQSGRNWNNTLDDFLVGIGLDRSTTDSCLYFSRDEGGETNLLVAVYVDDLVIAGRREKV-DEFKHSVSQRFRMKYLGSLSRVLGIEVRCDRPNGTITISQGSYIREVL 794
            P+A+ +++R V SLAA +  +L  MDV++A LN  ++E +++  P    +   D P  V +L++ LYG KQS R WN T+DDF++ +G  +  +D C+Y  RD  G+  + VA+YVDDLV+A   +++ +  KH++S+RF M  LG L   LG+E++ DR +G +T+ Q  +++ +L
Sbjct:   71 PVAKFTSIRIVLSLAAKYGLKLHQMDVKTAFLNGVLDEDIYMAQPD--GYVDEDHPDHVCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCVYLKRD--GQDMIFVALYVDDLVLASSNDELLESTKHALSKRFEMTDLGELEYFLGMEIKNDRDSGKVTVRQTKFLKSIL 243          
BLAST of mRNA_H-paniculata_contig14203.2558.1 vs. uniprot
Match: W7TCB8_9STRA (Gag-pol polyprotein n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TCB8_9STRA)

HSP 1 Score: 135 bits (341), Expect = 1.850e-33
Identity = 89/232 (38.36%), Postives = 125/232 (53.88%), Query Frame = 3
Query:  120 EITGRAKGDSCEMDFQAETEGGR*RGTLQSATSGSRVFAGG-----G*RFL*NQCPIARMSTLRTVFSLAA*HDFELQDMDVESACLNAPVEEVLFVKLPSDSSHF-S*DIPFVRRLRKILYGFKQSGRNWNNTLDDFLVGIGLDRSTTDSCLYFSRDEGGETNLLVAVYVDDLVIAGR-REKVDEFKHSVSQRFRMKYLGSLSRVLGIEVRCDRPNGTITISQGSYIREVL 794
            E+T   KG+ C      ET+     G +    +  R  A G     G  +L    P+A ++T+R V +LA   D EL +MDVE A L + +EE ++VK P     + S     V RLRK LYG KQSGRNW+  +D +  G G   S+ D CLY      GE  L++ +YVDDL+I    RE V +FKH++S+ F MK L  L  +LG+ ++ DR    + ISQ +YI  +L
Sbjct:    7 ELTPLPKGERCISSGWVETDKRDQNGVIVRRKA--RFIAKGYSQEFGYDYLHTYAPVASITTIRLVLALACILDLELDNMDVEPAYLQSDLEEKVYVKQPPGYEQYGSNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEI-LVIVLYVDDLIITSNSREMVGKFKHAISREFSMKDLKELDWILGMAIKRDRGKRVMEISQTAYIDMML 235          
BLAST of mRNA_H-paniculata_contig14203.2558.1 vs. uniprot
Match: H3H8P6_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H8P6_PHYRM)

HSP 1 Score: 130 bits (327), Expect = 1.330e-32
Identity = 67/177 (37.85%), Postives = 113/177 (63.84%), Query Frame = 3
Query:  270 PIARMSTLRTVFSLAA*HDFELQDMDVESACLNAPVEEVLFVKLPSDSSHFS*DIP-FVRRLRKILYGFKQSGRNWNNTLDDFLVGIGLDRSTTDSCLYFSRDEGGETNLLVAVYVDDLVIAGRREKV-DEFKHSVSQRFRMKYLGSLSRVLGIEVRCDRPNGTITISQGSYIREVL 794
            P+A+ +++R V SLAA +  +L  MDV++A LN  ++E +++  P    +   D P  V +L++ LYG KQS R WN T+DDF++ +G  +  +D C+Y  RD  G+  + VA+YVDDLV+A   +++ +  KH++S+RF M  LG L   LG+E++ D  +G +T+ Q  +++ +L
Sbjct:  110 PVAKFTSIRIVLSLAAKYGLKLHQMDVKTAFLNGVLDEDIYMAQPD--GYVDEDHPDHVCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCVYLKRD--GQDMIFVALYVDDLVLASSNDELLESTKHALSKRFEMTDLGELEYFLGMEIKNDHGSGKVTVRQTKFLKSIL 282          
BLAST of mRNA_H-paniculata_contig14203.2558.1 vs. uniprot
Match: H3H9Y1_PHYRM (CCHC-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H9Y1_PHYRM)

HSP 1 Score: 134 bits (337), Expect = 2.200e-32
Identity = 69/177 (38.98%), Postives = 114/177 (64.41%), Query Frame = 3
Query:  270 PIARMSTLRTVFSLAA*HDFELQDMDVESACLNAPVEEVLFVKLPSDSSHFS*DIP-FVRRLRKILYGFKQSGRNWNNTLDDFLVGIGLDRSTTDSCLYFSRDEGGETNLLVAVYVDDLVIAGRREKV-DEFKHSVSQRFRMKYLGSLSRVLGIEVRCDRPNGTITISQGSYIREVL 794
            P+A+ +++R V SLAA +  +L  MDV++A LN  ++E +++  P    +   D P  V +L++ LYG KQS R WN T+DDF++ +G  +  +D C+Y  RD  G+  + VA+YVDDLV+A   +++ D  KH++S+RF M  LG L   LG+E++ DR +G +T+ Q  +++ +L
Sbjct:  369 PVAKFTSIRIVLSLAAKYGLKLHQMDVKTAFLNGVLDEDIYMAQPD--GYVDEDHPDHVCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCVYLKRD--GQDMIFVALYVDDLVLASSNDELLDSTKHALSKRFEMTDLGELEYFLGMEIKNDRDSGKVTVRQTKFLKSIL 541          
BLAST of mRNA_H-paniculata_contig14203.2558.1 vs. uniprot
Match: W7TII5_9STRA (Gag-pol polyprotein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TII5_9STRA)

HSP 1 Score: 128 bits (322), Expect = 7.830e-32
Identity = 83/231 (35.93%), Postives = 125/231 (54.11%), Query Frame = 3
Query:  123 ITGRAKGDSCEMDFQAETEGGR*RGTLQSATSGSRVFAGG-----G*RFL*NQCPIARMSTLRTVFSLAA*HDFELQDMDVESACLNAPVEEVLFVKLPSDSSHFS*D-IPFVRRLRKILYGFKQSGRNWNNTLDDFLVGIGLDRSTTDSCLYFSRDEGGETNLLVAVYVDDLVIAGR-REKVDEFKHSVSQRFRMKYLGSLSRVLGIEVRCDRPNGTITISQGSYIREVL 794
            +T   KG+ C      ET+     G +    +  R  A G     G  +L    P+A ++T+R + ++A   D EL +MDV++A L + +EE ++VK P        +    V RLRK LYG KQSGRNW+  +D +  G G   S+ D CLY      GE  L++ +YVDDL+IAG  R+ VD+FK ++S+   MK L  L  +LG+ ++ +R    + ISQ +YI  +L
Sbjct:    8 LTPLPKGERCISSGWVETDKRDQNGIIVRRKA--RFIAKGYSQEYGYDYLNTYAPVASITTIRLILAIACILDLELDNMDVDTAYLQSDLEEKIYVKQPPGYEQCGPNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHSSSADPCLYVKFGSSGEM-LVIVLYVDDLIIAGNSRDMVDDFKQAISKEISMKDLKELDWILGMAIKRNREKRFMEISQTAYIDMML 235          
BLAST of mRNA_H-paniculata_contig14203.2558.1 vs. uniprot
Match: W7T0T3_9STRA (Gag-pol polyprotein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T0T3_9STRA)

HSP 1 Score: 133 bits (335), Expect = 1.090e-31
Identity = 75/183 (40.98%), Postives = 110/183 (60.11%), Query Frame = 3
Query:  252 FL*NQCPIARMSTLRTVFSLAA*HDFELQDMDVESACLNAPVEEVLFVKLPSDSSHF-S*DIPFVRRLRKILYGFKQSGRNWNNTLDDFLVGIGLDRSTTDSCLYFSRDEGGETNLLVAVYVDDLVIAGR-REKVDEFKHSVSQRFRMKYLGSLSRVLGIEVRCDRPNGTITISQGSYIREVL 794
            +L    P+A ++T+R + ++A   D EL +MDVE+A L + +EE ++VK P     + S     V RLRK LYG KQSGRNW+  +D +  G G   S+ D CLY      GE  L++ +YVDDL+I    RE V++FKH++S+ F MK L  L  +LG+ ++ DR    + ISQ +YI  +L
Sbjct:  494 YLYTYAPVASITTIRLILAIACILDLELDNMDVETAYLQSDLEEKVYVKQPIGYEQYGSNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEI-LVIVLYVDDLIITSNSREMVNKFKHAISREFSMKDLKELDWILGMAIKRDREKRVMEISQTAYIDMML 675          
BLAST of mRNA_H-paniculata_contig14203.2558.1 vs. uniprot
Match: W7TJ26_9STRA (Gag-pol polyprotein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJ26_9STRA)

HSP 1 Score: 133 bits (334), Expect = 1.190e-31
Identity = 87/232 (37.50%), Postives = 125/232 (53.88%), Query Frame = 3
Query:  120 EITGRAKGDSCEMDFQAETEGGR*RGTLQSATSGSRVFAGG-----G*RFL*NQCPIARMSTLRTVFSLAA*HDFELQDMDVESACLNAPVEEVLFVKLPSDSSHFS*DI-PFVRRLRKILYGFKQSGRNWNNTLDDFLVGIGLDRSTTDSCLYFSRDEGGETNLLVAVYVDDLVIAGR-REKVDEFKHSVSQRFRMKYLGSLSRVLGIEVRCDRPNGTITISQGSYIREVL 794
            E+T   KG+ C      ET+    +G +    +  R  A G     G  +L    P+A M+T+R V +LA   D EL +MDV++A L + +EE +++K P     +  +    V RLRK LYG KQSGRNW+  +D +  G GL  S  D CLY      GE  L++ +YVDDL+I    R   D+FK  +S+ F MK L  L  +LG+ ++ +R N T+ ISQ  YI  +L
Sbjct:  227 ELTPLPKGERCISSGWVETDKRDQKGVIVRRKA--RFIAKGYSQEFGYDYLHTYAPVASMTTIRLVLALACILDLELDNMDVDTAYLQSDLEEKVYIKQPPGYEKYGPNGGELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGLHPSYADPCLYVKFASSGEI-LVIVLYVDDLIIGSNSRTMTDKFKQDISREFSMKDLKELDWILGMGIKRNRENRTMEISQTGYIGMML 455          
BLAST of mRNA_H-paniculata_contig14203.2558.1 vs. uniprot
Match: H3H9D6_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H9D6_PHYRM)

HSP 1 Score: 132 bits (332), Expect = 2.620e-31
Identity = 68/177 (38.42%), Postives = 114/177 (64.41%), Query Frame = 3
Query:  270 PIARMSTLRTVFSLAA*HDFELQDMDVESACLNAPVEEVLFVKLPSDSSHFS*DIP-FVRRLRKILYGFKQSGRNWNNTLDDFLVGIGLDRSTTDSCLYFSRDEGGETNLLVAVYVDDLVIAGRREKV-DEFKHSVSQRFRMKYLGSLSRVLGIEVRCDRPNGTITISQGSYIREVL 794
            P+A+ +++R V SLAA +  +L  MDV++A LN  ++E +++  P    +   D P  V +L++ LYG KQS R WN T+DDF++ +G  +  +D C+Y  RD  G+  + VA+YVDDLV+A   +++ +  KH++S+RF M  LG L   LG+E++ DR +G +T+ Q  +++ +L
Sbjct:  489 PVAKFTSIRIVLSLAAKYGLKLHQMDVKTAFLNGVLDEDIYMAQPD--GYVDEDHPDHVCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCVYLKRD--GQDMIFVALYVDDLVLASSNDELLESTKHALSKRFEMTDLGELEYFLGMEIKNDRDSGKVTVRQTKFLQSIL 661          
BLAST of mRNA_H-paniculata_contig14203.2558.1 vs. uniprot
Match: A0A6G0WHK2_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WHK2_9STRA)

HSP 1 Score: 127 bits (319), Expect = 2.710e-31
Identity = 71/179 (39.66%), Postives = 115/179 (64.25%), Query Frame = 3
Query:  270 PIARMSTLRTVFSLAA*HDFELQDMDVESACLNAPVEEVLFVKLP---SDSSHFS*DIPFVRRLRKILYGFKQSGRNWNNTLDDFLVGIGLDRSTTDSCLYFSRDEGGETNLLVAVYVDDLVIAGRR-EKVDEFKHSVSQRFRMKYLGSLSRVLGIEVRCDRPNGTITISQGSYIREVL 794
            P+A+ +++R + SLAA H+ ELQ MDV +A LN+ ++E +++++P   +D  +     P V +L+K LYG KQ+ R WN T+D F++ IG  +S  D C+Y  R +  E  +LV++YVDDL++A    E +   K ++S+RF+M  LG LS  LGIE+    P+G++ I Q  +++ VL
Sbjct:  131 PVAKFTSIRVLLSLAAKHNLELQQMDVNTAFLNSDLDEDIYMEIPMGLNDHKNPGLSKP-VLKLKKSLYGLKQAPRLWNQTIDGFMLSIGFVKSKADHCIYIKRQD--EDIILVSLYVDDLILASNSDEMMQTTKIALSKRFKMTDLGPLSYCLGIEI-VRSPSGSVFIHQSKFLKSVL 305          
BLAST of mRNA_H-paniculata_contig14203.2558.1 vs. uniprot
Match: A0A409WVI7_9AGAR (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Panaeolus cyanescens TaxID=181874 RepID=A0A409WVI7_9AGAR)

HSP 1 Score: 132 bits (332), Expect = 3.000e-31
Identity = 79/178 (44.38%), Postives = 107/178 (60.11%), Query Frame = 3
Query:  270 PIARMSTLRTVFSLAA*HDFELQDMDVESACLNAPVEEVLFVKLPSDSSHFS*DIP--FVRRLRKILYGFKQSGRNWNNTLDDFLVGIGLDRSTTDSCLYFSRDEGGETNLLVAVYVDDLVIAGR-REKVDEFKHSVSQRFRMKYLGSLSRVLGIEVRCDRPNGTITISQGSYIREVL 794
            P+A + ++R + +LAA HD EL  MDV++A LN  + E L++ LP D      DIP     +L+K LYG KQ+GR WN T D  L  +G  R   ++CLY  R EGG+   LV VYVDDL++A   R  +DE K  ++  F+M+ LG  S VLGI++R DR    I +SQ  YI  VL
Sbjct: 1089 PVANLESIRIILALAAKHDLELDQMDVQTAYLNGKLTEDLYL-LPPDGV----DIPKGHCWKLKKSLYGLKQAGRTWNKTFDSSLKDLGFTRLDAETCLYVMRGEGGKLCFLV-VYVDDLILAATSRAYMDEIKTKLAATFKMRDLGPASYVLGIQIRRDRRKRIIGLSQRQYIDTVL 1260          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14203.2558.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
H3H934_PHYRM1.430e-3338.42Reverse transcriptase Ty1/copia-type domain-contai... [more]
W7TCB8_9STRA1.850e-3338.36Gag-pol polyprotein n=3 Tax=Nannochloropsis gadita... [more]
H3H8P6_PHYRM1.330e-3237.85Reverse transcriptase Ty1/copia-type domain-contai... [more]
H3H9Y1_PHYRM2.200e-3238.98CCHC-type domain-containing protein n=1 Tax=Phytop... [more]
W7TII5_9STRA7.830e-3235.93Gag-pol polyprotein n=1 Tax=Nannochloropsis gadita... [more]
W7T0T3_9STRA1.090e-3140.98Gag-pol polyprotein n=2 Tax=Nannochloropsis gadita... [more]
W7TJ26_9STRA1.190e-3137.50Gag-pol polyprotein n=2 Tax=Nannochloropsis gadita... [more]
H3H9D6_PHYRM2.620e-3138.42Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A6G0WHK2_9STRA2.710e-3139.66Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A409WVI7_9AGAR3.000e-3144.38Integrase catalytic domain-containing protein (Fra... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14203contigH-paniculata_contig14203:5966..6759 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score85.9
Seed ortholog evalue9.3e-15
Seed eggNOG ortholog15368.BRADI3G37625.1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs37YYP@33090,3GQD7@35493,3IKKZ@38820,3M3FD@4447,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPoales
Best eggNOG OGNA|NA|NA
Exons1
Model size794
Cds size237
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14203.2558.1prot_H-paniculata_contig14203.2558.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig14203 6484..6720 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929131.6173236-UTR-H-paniculata_contig14203:5965..64831622929131.6173236-UTR-H-paniculata_contig14203:5965..6483Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig14203 5966..6483 -
1691480742.9650195-UTR-H-paniculata_contig14203:5965..64831691480742.9650195-UTR-H-paniculata_contig14203:5965..6483Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig14203 5966..6483 -
1622929131.6422975-UTR-H-paniculata_contig14203:6720..67591622929131.6422975-UTR-H-paniculata_contig14203:6720..6759Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig14203 6721..6759 -
1691480742.9873817-UTR-H-paniculata_contig14203:6720..67591691480742.9873817-UTR-H-paniculata_contig14203:6720..6759Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig14203 6721..6759 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929131.6320367-CDS-H-paniculata_contig14203:6483..67201622929131.6320367-CDS-H-paniculata_contig14203:6483..6720Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14203 6484..6720 -
1691480742.9772964-CDS-H-paniculata_contig14203:6483..67201691480742.9772964-CDS-H-paniculata_contig14203:6483..6720Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig14203 6484..6720 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig14203.2558.1

>prot_H-paniculata_contig14203.2558.1 ID=prot_H-paniculata_contig14203.2558.1|Name=mRNA_H-paniculata_contig14203.2558.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=79bp
MEKWRAAMEEEWGTLVKNGTWESEDLGRLPAGRKGIRAKWIFKRKLKEDG
SVARYKARLVAQGFSQVEGEDFFETSAP*
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mRNA from alignment at H-paniculata_contig14203:5966..6759-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig14203.2558.1 ID=mRNA_H-paniculata_contig14203.2558.1|Name=mRNA_H-paniculata_contig14203.2558.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=794bp|location=Sequence derived from alignment at H-paniculata_contig14203:5966..6759- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GAGCCGAAATCCGCGGTAGAAGCATTAAAGGGTCCAGAGATGGAAAAATG GCGCGCGGCAATGGAGGAAGAATGGGGGACGTTGGTGAAAAATGGGACAT GGGAAAGCGAAGACCTGGGGAGATTACCGGCAGGGCGAAAGGGGATTCGT GCGAAATGGATTTTCAAGCGGAAACTGAAGGAGGACGGTAGCGTGGCACG CTACAAAGCGCGACTAGTGGCTCAAGGGTTTTCGCAGGTGGAGGGTGAAG ATTTCTTTGAAACCAGTGCCCCATAGCTCGCATGTCGACGTTACGTACTG TTTTTAGCCTGGCTGCCTAACATGATTTCGAATTACAAGACATGGACGTA GAATCGGCGTGTTTGAACGCCCCGGTAGAAGAAGTGCTGTTTGTTAAGCT ACCCTCCGATTCTTCACATTTCTCCTGAGACATACCATTTGTGCGCCGCC TGCGTAAAATCCTGTACGGCTTCAAGCAGAGCGGCCGAAACTGGAATAAC ACTCTTGACGACTTTCTTGTTGGGATAGGACTCGACCGTTCCACTACCGA CTCATGCTTGTACTTTTCCCGCGACGAAGGGGGAGAGACAAACCTTCTGG TGGCCGTGTATGTTGACGACCTGGTCATTGCTGGTCGTCGTGAGAAAGTA GACGAGTTCAAGCATAGCGTAAGTCAGCGTTTTAGGATGAAATACTTGGG CTCTCTCTCGCGCGTGTTGGGAATAGAAGTACGATGTGACCGCCCTAATG GTACCATAACCATCTCGCAGGGTAGCTACATCCGCGAGGTACTA
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Coding sequence (CDS) from alignment at H-paniculata_contig14203:5966..6759-

>mRNA_H-paniculata_contig14203.2558.1 ID=mRNA_H-paniculata_contig14203.2558.1|Name=mRNA_H-paniculata_contig14203.2558.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=474bp|location=Sequence derived from alignment at H-paniculata_contig14203:5966..6759- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGAAAAATGGCGCGCGGCAATGGAGGAAGAATGGGGGACGTTGGTGAA
AAATGGGACATGGGAAAGCGAAGACCTGGGGAGATTACCGGCAGGGCGAA
AGGGGATTCGTGCGAAATGGATTTTCAAGCGGAAACTGAAGGAGGACGGT
AGCGTGGCACGCTACAAAGCGCGACTAGTGGCTCAAGGGTTTTCGCAGGT
GGAGGGTGAAGATTTCTTTGAAACCAGTGCCCCATAGATGGAAAAATGGC
GCGCGGCAATGGAGGAAGAATGGGGGACGTTGGTGAAAAATGGGACATGG
GAAAGCGAAGACCTGGGGAGATTACCGGCAGGGCGAAAGGGGATTCGTGC
GAAATGGATTTTCAAGCGGAAACTGAAGGAGGACGGTAGCGTGGCACGCT
ACAAAGCGCGACTAGTGGCTCAAGGGTTTTCGCAGGTGGAGGGTGAAGAT
TTCTTTGAAACCAGTGCCCCATAG
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