prot_H-paniculata_contig142.2552.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig142.2552.1
Unique Nameprot_H-paniculata_contig142.2552.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length152
Homology
BLAST of mRNA_H-paniculata_contig142.2552.1 vs. uniprot
Match: D7FHJ7_ECTSI (EsV-1-164 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHJ7_ECTSI)

HSP 1 Score: 136 bits (342), Expect = 3.460e-38
Identity = 62/93 (66.67%), Postives = 76/93 (81.72%), Query Frame = 0
Query:   52 AAVYEVSPEGEPYSLTAALATAGPGDTIYLADGIYREPIVTVVAGEEGNPVVIEGGSDAVISAFSGDRDLMWSQKVVDVRHSWITLRVRVFVH 144
            AA YEVSP+G+P +LTAAL  AG GDTI L DGIYREP+VT+ AG EGNP+VIEGG DAV++ ++GD+ +MWSQKVVD+RHSW+TLR     H
Sbjct:   51 AATYEVSPDGDPMTLTAALEVAGAGDTISLGDGIYREPLVTMKAGVEGNPLVIEGGRDAVVNYYTGDKSIMWSQKVVDIRHSWVTLRANANAH 143          
BLAST of mRNA_H-paniculata_contig142.2552.1 vs. uniprot
Match: A0A6H5KG59_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG59_9PHAE)

HSP 1 Score: 134 bits (338), Expect = 1.060e-36
Identity = 63/87 (72.41%), Postives = 75/87 (86.21%), Query Frame = 0
Query:   52 AAVYEVSPEGEPYSLTAALATAGPGDTIYLADGIYREPIVTVVAGEEGNPVVIEGGSDAVISAFSGDRDLMWSQKVVDVRHSWITLR 138
            AA YEVSP+G+P +LTAAL  AG GDTI L DGIYREP+VT+ AG EGNP+VIEGG DAVI+ ++GD+ +MWSQKVVD+RHSWITLR
Sbjct:   63 AATYEVSPDGDPMTLTAALEVAGAGDTISLGDGIYREPLVTMNAGVEGNPLVIEGGRDAVINYYTGDKSIMWSQKVVDIRHSWITLR 149          
BLAST of mRNA_H-paniculata_contig142.2552.1 vs. uniprot
Match: D8LJ28_ECTSI (EsV-1-164 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ28_ECTSI)

HSP 1 Score: 127 bits (319), Expect = 4.200e-35
Identity = 62/86 (72.09%), Postives = 72/86 (83.72%), Query Frame = 0
Query:   52 AAVYEVSPEGEPYSLTAALATAGPGDTIYLADGIYREPIVTVVAGEEGNPVVIEGGSDAVISAFSGDRDLMWSQKVVDVRHSWITL 137
            AA+YEVSP+G P +LTAAL  AG GD I LADGIYREPIVT+ AG EGNP+VI GG  A+I+ FSGDR LMWSQKVVD+RHS++TL
Sbjct:   33 AAMYEVSPDGSPMTLTAALEVAGAGDIISLADGIYREPIVTMNAGVEGNPLVITGGRGAIINYFSGDRSLMWSQKVVDIRHSYVTL 118          
BLAST of mRNA_H-paniculata_contig142.2552.1 vs. uniprot
Match: D8LJ42_ECTSI (FirrV-1-B30 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ42_ECTSI)

HSP 1 Score: 132 bits (332), Expect = 5.430e-33
Identity = 60/87 (68.97%), Postives = 74/87 (85.06%), Query Frame = 0
Query:   52 AAVYEVSPEGEPYSLTAALATAGPGDTIYLADGIYREPIVTVVAGEEGNPVVIEGGSDAVISAFSGDRDLMWSQKVVDVRHSWITLR 138
            AA YEVSP+G+P +L AAL  AG GDTI L DGIYREP+VT+ AG EGNP+VIEGG DAV++ ++GD+ +MWSQKVVD+RHSW+TLR
Sbjct:   78 AATYEVSPDGDPMTLAAALEVAGAGDTISLGDGIYREPLVTMKAGVEGNPLVIEGGRDAVVNYYTGDKSIMWSQKVVDIRHSWVTLR 164          
BLAST of mRNA_H-paniculata_contig142.2552.1 vs. uniprot
Match: A0A6H5K1D2_9PHAE (Beta_helix domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1D2_9PHAE)

HSP 1 Score: 125 bits (315), Expect = 4.770e-31
Identity = 66/109 (60.55%), Postives = 78/109 (71.56%), Query Frame = 0
Query:   29 RTAATALSVLTIAIALTLPLTVEAAVYEVSPEGEPYSLTAALATAGPGDTIYLADGIYREPIVTVVAGEEGNPVVIEGGSDAVISAFSGDRDLMWSQKVVDVRHSWITL 137
            +TA  A   L  A    L     AA+YEVSP+G P +LTAAL  AG GD + LADG YREPIVT+ AG EGNP+VI GG  A+I+ FSGDR LMWSQKVVD+RHS++TL
Sbjct:    9 KTAGVAALRLATAALAALATGTNAAMYEVSPDGNPMTLTAALEVAGAGDIVSLADGTYREPIVTMNAGVEGNPLVITGGRGAIINYFSGDRSLMWSQKVVDIRHSYVTL 117          
BLAST of mRNA_H-paniculata_contig142.2552.1 vs. uniprot
Match: A0A6H5KT05_9PHAE (Beta_helix domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KT05_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 2.030e-19
Identity = 47/87 (54.02%), Postives = 61/87 (70.11%), Query Frame = 0
Query:   51 EAAVYEVSPEGEPYSLTAALATAGPGDTIYLADGIYREPIVTVVAGEEGNPVVIEGGSDAVISAFSGDRDLMWSQKVVDVRHSWITL 137
            +A  ++ SP+G PYS+ +ALA AG GDT+ LADG Y E IVTV  GE GNP++I GG DA+++A  GD       KVV V+HSW+TL
Sbjct:   12 DARTFDASPDGVPYSIASALAEAGAGDTVVLADGTYNEAIVTVQGGESGNPLIITGGRDALVNA--GD-----DGKVVYVQHSWVTL 91          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig142.2552.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FHJ7_ECTSI3.460e-3866.67EsV-1-164 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5KG59_9PHAE1.060e-3672.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJ28_ECTSI4.200e-3572.09EsV-1-164 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D8LJ42_ECTSI5.430e-3368.97FirrV-1-B30 n=2 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6H5K1D2_9PHAE4.770e-3160.55Beta_helix domain-containing protein n=1 Tax=Ectoc... [more]
A0A6H5KT05_9PHAE2.030e-1954.02Beta_helix domain-containing protein n=2 Tax=Ectoc... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 48..140
e-value: 5.0E-11
score: 44.5
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 41..137

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig142contigH-paniculata_contig142:36743..37198 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig142.2552.1mRNA_H-paniculata_contig142.2552.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig142 36743..37198 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig142.2552.1 ID=prot_H-paniculata_contig142.2552.1|Name=mRNA_H-paniculata_contig142.2552.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=152bp
MTTVTDLRHEQQEHKEQQRQHDTRTIPARTAATALSVLTIAIALTLPLTV
EAAVYEVSPEGEPYSLTAALATAGPGDTIYLADGIYREPIVTVVAGEEGN
PVVIEGGSDAVISAFSGDRDLMWSQKVVDVRHSWITLRVRVFVHISIVSS
R*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012334Pectin_lyas_fold
IPR011050Pectin_lyase_fold/virulence