prot_H-paniculata_contig14183.2540.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14183.2540.1
Unique Nameprot_H-paniculata_contig14183.2540.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length425
Homology
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BLAST of mRNA_H-paniculata_contig14183.2540.1 vs. uniprot
Match: D7G2K1_ECTSI (Alpha,alpha-trehalose-phosphate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2K1_ECTSI)

HSP 1 Score: 132 bits (331), Expect = 1.480e-29
Identity = 69/100 (69.00%), Postives = 82/100 (82.00%), Query Frame = 0 
Query:  314 MADVGGHGLDLPINTFSCTVGLKLSQANYYIKSSLAAAALCKELSQVKEKEEFSNLEDYEDPAAGVHLQYAVANTGTSSTDPPHSRSDGDIANLAIVMSS 413
            M D+G +GLDLPINTFSCTVGLKLSQANYYIKSS AAAALCKELSQVK+KE++ + E YED  AGV++QYAVAN   ++  PPH+ S  +IA+L IVM S
Sbjct:  633 MGDIGVNGLDLPINTFSCTVGLKLSQANYYIKSSAAAAALCKELSQVKDKEDYGSFEGYED-GAGVYVQYAVANQQGAAKAPPHTSSASNIADLDIVMGS 731
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BLAST of mRNA_H-paniculata_contig14183.2540.1 vs. uniprot
Match: A0A6H5JHQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHQ0_9PHAE)

HSP 1 Score: 126 bits (316), Expect = 1.790e-27
Identity = 70/105 (66.67%), Postives = 82/105 (78.10%), Query Frame = 0 
Query:  314 MADVGGHGLDLPINTFSCTVGLKLSQANYYIKSSLAAAALCKE-----LSQVKEKEEFSNLEDYEDPAAGVHLQYAVANTGTSSTDPPHSRSDGDIANLAIVMSS 413
            M DVG +GLDLPINTFSCTVGLKLSQANYYIKSS AAAALCKE     LSQVK+KE++ + E YED  AGV++QYAVAN   ++  PPH+ S  +IA+L IVM S
Sbjct: 1209 MGDVGVNGLDLPINTFSCTVGLKLSQANYYIKSSAAAAALCKEAIVGPLSQVKDKEDYGSFEGYED-GAGVYVQYAVANQQGAAKAPPHTSSASNIADLDIVMGS 1312
[Close]
BLAST of mRNA_H-paniculata_contig14183.2540.1 vs. uniprot
Match: A0A836CNA9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNA9_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 2.800e-6
Identity = 30/38 (78.95%), Postives = 32/38 (84.21%), Query Frame = 0 
Query:  321 GLDLPINTFSCTVGLKLSQANYYIKSSLAAAALCKELS 358
            GLDLPINTFSCTVGLK+SQA YYIKS  A  AL K+LS
Sbjct:  361 GLDLPINTFSCTVGLKVSQAQYYIKSRQAVGALLKDLS 398
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14183.2540.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G2K1_ECTSI1.480e-2969.00Alpha,alpha-trehalose-phosphate synthase n=1 Tax=E... [more]
A0A6H5JHQ0_9PHAE1.790e-2766.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CNA9_9STRA2.800e-678.95Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14183contigH-paniculata_contig14183:1975..5244 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14183.2540.1mRNA_H-paniculata_contig14183.2540.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14183 1938..5346 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14183.2540.1 ID=prot_H-paniculata_contig14183.2540.1|Name=mRNA_H-paniculata_contig14183.2540.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=425bp
MLSRGGGGEGDVGAAAAGGEDNEVIGSLVSGVVDDTPSEDGKGSSGSGNN
NNRKMAASAMPPAPHANSVAAIATQRQPQYSPELGDKDGRRKMSHISGHA
QGAGSEDSGSIIYPDRERAEEDHGAAFLPVSADGESLAPEQVDRSTGRPR
VGLLAVVADEARGDEDEATTIAATPVTAKGRMAVGRVVAAENVGDTGALG
DERDWVDKAAIWKRDDDNDDDDGDNEGEEEEGEVAAAGATVKRVETTGGD
LPEQRPVSGDAAAAAVPTPVETETSQPWMSGAGFGREGRGRRDRELNTKD
SHEKVRTRSRSHSMADVGGHGLDLPINTFSCTVGLKLSQANYYIKSSLAA
AALCKELSQVKEKEEFSNLEDYEDPAAGVHLQYAVANTGTSSTDPPHSRS
DGDIANLAIVMSSHVNKMKCGACS*
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