prot_H-paniculata_contig1409.2496.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1409.2496.1
Unique Nameprot_H-paniculata_contig1409.2496.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1591
Homology
BLAST of mRNA_H-paniculata_contig1409.2496.1 vs. uniprot
Match: A0A6H5KP28_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP28_9PHAE)

HSP 1 Score: 591 bits (1524), Expect = 5.080e-178
Identity = 351/728 (48.21%), Postives = 450/728 (61.81%), Query Frame = 0
Query:    4 VTEYMWEWHGPQAEMARPRRPGGGADAGDDAPVDDPEDPVHSRNQRWREHGKSMAGGGGIHVXXXXXNENAAELKVMLSTFQSDHQAPCRVRVTFIVDSHSSGFYKEHTDTYMELRQLLPISELSSKGEEKQEVGQESFEEFGCSANSGVLPKCEIPFDLYVKGRSLPQGKRNSLVLFFDEILPSKIARGEAAEPEAVYILDADTGHP-DGLDDLLRMWQLLMSEGEETAAYTCPVRPVHQLESFLAASQALEYAQVWDCVGESYFAAQTAARGTSMMLKYSCLIEDGRGAMPPIGEGAQCPVLEVLSKTAASLVTLILLDVSPNDGILVLLRQRGYDVRSCAVADAVTCVPNSLLDFYAQRRRWYAASATAVLSSLTGRECYFQQRRGRGIMALYTLLFNVYLHSGVLFLPVLLTKGVS---LIYSSRNSSDSE--------------------LVLEWLVFGAIWAFLICNAIFYATTSYRHLWIWINVSSMMWMAFSALVLIGVSVFVTPWVGAVVLLAPFLLGALNVCGDTPTYWAWMALSAIPFVLVASVNSVLVLIFAVATLDSTEWGTRDVGSFDSGITKKRTTENFWKKVFYLFWGFAISIAAGAILLVSSKFTMLPIAIGIPILANVGKLLVSIIPSKLERSRQKLCLGDTMMDRPVSLGRRNMSEHVPSNGRSLQARPDRQRNTARKSSVISS------CPTENDSYVTADDGTPSPG 701
            +TE MWEW GP++E    R                   P+   +  WREHGK   GGGGIH+     NE   ELKVMLSTF+ D  A C VR++F++D          TD    L++LL +++ S+             E FGC  +SG L K  IPFDLYVKG SLP GKRNSLV FF++ILP K++RGEA EP+AVY+LDAD+GHP +GL DL  MW+LLM+E EE A  TCPVRPVH + SFLAASQ+LE+A +WD VGES+F  QT  RG   M KY CL+EDGR A PPIGEGA  P+L   SKTAA L  LILLD SP++G+LVLLRQRG+DVRSC  AD VTCVP S ++FYAQRRRWYA S  AV S LTG+E YFQ    R I++ Y  + N++LHSG+  +PVLL KG+    L   SR  SD +                      L+W+VF  +W F + N  FY T S   LW+WINV+S++WM      L+G    V+P +  ++++ P +L  LN    T   W ++ ++A+PFVL+ +VNSVLV ++A+ATLDSTEWGTRDVGSFDSG++K R      +K+  LF   A S A G ++++SS    LPI IGIP  A + KLL+ ++P+KLERSRQ   LGD +  RP+SL R +++E  P NG   +   DR     R    I         P +  S+VTA+DGTPSPG
Sbjct:    1 MTETMWEWDGPESE----RLXXXXXXXXXXXXXXXRGMPLPLMSPLWREHGKGQ-GGGGIHIVVCCCNETQEELKVMLSTFRIDATASCLVRISFVLDPRGPAQASSETDKV--LKRLLRVTDESAT------------EVFGCIHHSGTLDKTLIPFDLYVKGPSLPVGKRNSLVTFFNDILPVKMSRGEAVEPDAVYLLDADSGHPVNGLQDLESMWRLLMAE-EEVACVTCPVRPVHPMGSFLAASQSLEFA-LWDNVGESHFGVQTTCRGAQCMFKYRCLVEDGRLAEPPIGEGAMPPLLNPFSKTAAGLPALILLDSSPSEGLLVLLRQRGFDVRSCGTADGVTCVPCSWIEFYAQRRRWYAGSLVAVSSHLTGKESYFQAEWHRWIISSYAFVANLFLHSGLALMPVLLAKGLHQLVLYDESRGESDDDWNDEWSEWQEESADDGIDQHTNLDWIVFALVWGFFLLNVGFYLTRSQDQLWMWINVTSVLWMLLCGGTLVGSGFAVSPLIPVMLVIIPPVLAGLNTARGTIATWRYLCVAAVPFVLLTTVNSVLVFLYALATLDSTEWGTRDVGSFDSGVSKPRAASMRRRKLCILFTTMATSCALGVVMMISSSLIFLPIVIGIPSAAYLLKLLLVVVPAKLERSRQTYLLGD-VGSRPLSL-RGSVAELAPINGCPPEFSTDRHSGGDRNGGGIGQKGLGPKSPAKTGSHVTAEDGTPSPG 705          
BLAST of mRNA_H-paniculata_contig1409.2496.1 vs. uniprot
Match: D8LBH7_ECTSI (Chitin synthase 1, chs-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBH7_ECTSI)

HSP 1 Score: 435 bits (1118), Expect = 9.540e-135
Identity = 247/481 (51.35%), Postives = 305/481 (63.41%), Query Frame = 0
Query:    4 VTEYMWEWHGPQAEMARPRRPGGGADAGDDAPVDDPEDPVHSRNQRWREHGKSMAGGGGIHVXXXXXNENAAELKVMLSTFQSDHQAPCRVRVTFIVDSHSSGFYKEHTDTYMELRQLLPISELSSKGEEKQEVGQESFEEFGCSANSGVLPKCEIPFDLYVKGRSLPQGKRNSLVLFFDEILPSKIARGEAAEPEAVYILDADTGHP-DGLDDLLRMWQLLMSEGEETAAYTCPVRPVHQLESFLAASQALEYAQVWDCVGESYFAAQTAARGTSMMLKYSCLIEDGRGAMPPIGEGAQCPVLEVLSKTAASLVTLILLDVSPNDGILVLLRQRGYDVRSCAVADAVTCVPNSLLDFYAQRRRWYAASATAVLSSLTGRECYFQQRRGRGIMALYTLLFNVYLHSGVLFLPVLLTKGVS---LIYSSRNSSDSE--------------------LVLEWLVFGAIWAFLICNAIFYATTS 460
            + E MWEW GP++E  RPR     +D  DD     P  P+   +  WREHGK   GGGGIH+     NE   ELKVMLSTF++D  A C VR++F+++   +      TD    L++LL +++ S+             E  GC  +SG L K  IPFDLYVKG SLP GKRNSLV FF++ILP K++RGEA EP+ VY+LDAD+GHP +GL+DL  MW+LLM+E EE A  TCPVRPVH +ESFLAASQ+LE+A +WD VGES+F  QT  RG   M KY CL+EDGR A PP+GEGA  P+L   SKTAA L  LILLD SPN+G+LVLLRQRG+DVRSC  AD VTCVP S ++ YAQRRRWYA S  AV S LTG+E YFQ    R I++ Y  + NV+LHSG+  +PVLL KG+    L   SR  SD E                      L+W+VF  +W FL+ N   Y T S
Sbjct:    1 MAETMWEWDGPESERLRPRARNN-SDEDDDGERGMPLPPM---SPLWREHGKGQ-GGGGIHIVVCCCNETQEELKVMLSTFRTDATASCPVRISFVLEPRGAAEASSETDEV--LKRLLRVTDESAT------------EVSGCIHHSGTLDKTLIPFDLYVKGPSLPVGKRNSLVTFFNDILPVKMSRGEAVEPDVVYLLDADSGHPVNGLEDLESMWRLLMAE-EEVACVTCPVRPVHPMESFLAASQSLEFA-LWDNVGESHFGVQTTCRGAQCMFKYRCLVEDGRLAQPPVGEGAMPPLLNSFSKTAAGLPALILLDSSPNEGLLVLLRQRGFDVRSCGTADGVTCVPCSWIELYAQRRRWYAGSLVAVSSHLTGKESYFQAEWHRWIISSYAFVANVFLHSGLALMPVLLAKGIHRLVLYDESRGESDDEWNNEWSAWQEESADDDIDRHTNLDWIVFALVWGFLLLNVGVYLTRS 460          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1409.2496.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KP28_9PHAE5.080e-17848.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LBH7_ECTSI9.540e-13551.35Chitin synthase 1, chs-1 n=1 Tax=Ectocarpus silicu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004835Chitin synthasePANTHERPTHR22914CHITIN SYNTHASEcoord: 175..559
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 546..576
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 437..457
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 458..477
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 602..623
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 624..1590
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 367..385
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 418..436
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 386..396
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 478..505
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 577..596
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..366
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 597..601
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 397..417
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 517..545
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 506..516
NoneNo IPR availableTMHMMTMhelixcoord: 367..386
NoneNo IPR availableTMHMMTMhelixcoord: 525..547
NoneNo IPR availableTMHMMTMhelixcoord: 464..486
NoneNo IPR availableTMHMMTMhelixcoord: 393..415
NoneNo IPR availableTMHMMTMhelixcoord: 603..625
NoneNo IPR availableTMHMMTMhelixcoord: 490..512
NoneNo IPR availableTMHMMTMhelixcoord: 577..596
NoneNo IPR availableTMHMMTMhelixcoord: 435..457

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1409contigH-paniculata_contig1409:2442..21718 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1409.2496.1mRNA_H-paniculata_contig1409.2496.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1409 2107..23333 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1409.2496.1 ID=prot_H-paniculata_contig1409.2496.1|Name=mRNA_H-paniculata_contig1409.2496.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1591bp
MTIVTEYMWEWHGPQAEMARPRRPGGGADAGDDAPVDDPEDPVHSRNQRW
REHGKSMAGGGGIHVVVCCCNENAAELKVMLSTFQSDHQAPCRVRVTFIV
DSHSSGFYKEHTDTYMELRQLLPISELSSKGEEKQEVGQESFEEFGCSAN
SGVLPKCEIPFDLYVKGRSLPQGKRNSLVLFFDEILPSKIARGEAAEPEA
VYILDADTGHPDGLDDLLRMWQLLMSEGEETAAYTCPVRPVHQLESFLAA
SQALEYAQVWDCVGESYFAAQTAARGTSMMLKYSCLIEDGRGAMPPIGEG
AQCPVLEVLSKTAASLVTLILLDVSPNDGILVLLRQRGYDVRSCAVADAV
TCVPNSLLDFYAQRRRWYAASATAVLSSLTGRECYFQQRRGRGIMALYTL
LFNVYLHSGVLFLPVLLTKGVSLIYSSRNSSDSELVLEWLVFGAIWAFLI
CNAIFYATTSYRHLWIWINVSSMMWMAFSALVLIGVSVFVTPWVGAVVLL
APFLLGALNVCGDTPTYWAWMALSAIPFVLVASVNSVLVLIFAVATLDST
EWGTRDVGSFDSGITKKRTTENFWKKVFYLFWGFAISIAAGAILLVSSKF
TMLPIAIGIPILANVGKLLVSIIPSKLERSRQKLCLGDTMMDRPVSLGRR
NMSEHVPSNGRSLQARPDRQRNTARKSSVISSCPTENDSYVTADDGTPSP
GSAAGFGFSGESSSALMDTQSQIFDDEPLDQARRARSHVKEARGPRHNMS
GGQSRSRSRSRSRSPSPSSRRSSSLMSAASRMSTSGMTNSGSGTSEGMGI
DAEEDFSALVRPPLGEAVFNDLYDVDDDDVHAVEELNRRGSGRMESAPDI
GGSKGEGSADNAKPVPVERKARSQADGPVGGTKLSGAGSEEPLDVGLGTQ
SKSATVREVEGSSKGLAEDNLADEAESSPPVAWRPPSIPRTSNGKLVSVS
PAKPNGPSSATDISSNNNGRQGVKPAQPKTNAGFIRRDSSADDSENERIL
AANTARNAASSVGLSGINKRTVVKPSPFTGSRRAWGLGHGSDSEEDGPPP
EKQHVPEPSGNRGLYGRWGVGRESFDSDENDDTRFTGGRARDTGSSAPVG
RRGSLGLNIQGKEDVQDVVRAPATQDDTGRTGAARFGTGMLSGWGRRQSS
MDDSEDENMSSAPKKSSRNTRHTMGRGGGRSGSDAAANSSRPTWYRNDSF
DSEEGEEPVRRPQPYVRGRGGRTTRGGARGGGRSAPPGNKPSVFPAWGKS
PMDSEDENYVPSPNIFARAHSAREGVSSNQTSANRARTWGSSLLGSGRQP
SSSGQVGTGGQADIGGQVGTGGQAGTGGQADDTGGQSTNRTSSGWGSSIL
SSMGGNQVARSSIGWGNSVTGSGSQSAPVGPSISSGLTPRASSSSSSTSG
PVRPRASVMSAAPAPAQPARDDPHTRGPDPLVGAASGAVVADQAVPERNP
QLAAAVDFNEQVATISVGPQSQAALTAKQRPTAAKQQAIAPEGADRATWG
AGQSSVFDSSGSSSEDDKKPRGLRGVQILSNVQGPVEEGPSIDGRAAGGR
PKTAEANAAAGVAAATRSQGIAAKAEQGHSTVNEISGAGE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004835Chitin_synth