prot_H-paniculata_contig14.2443.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig14.2443.1
Unique Nameprot_H-paniculata_contig14.2443.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length211
Homology
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BLAST of mRNA_H-paniculata_contig14.2443.1 vs. uniprot
Match: A0A6H5JK21_9PHAE (MYB protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JK21_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 3.910e-18
Identity = 46/67 (68.66%), Postives = 58/67 (86.57%), Query Frame = 0 
Query:   50 MMSAQALFRGNIPGLTTFGRNEINNFHKEKALLLSAAKASGDSDKCTMIEETTPDVLNAHGLLMFLK 116
            MMSAQALF  +IPGLT+F R E+++F +EKA LLSAA+A+GD++K  M+EETTPDVLNA GLLMFL+
Sbjct:  224 MMSAQALFGKSIPGLTSFDRAEMHSFQQEKAQLLSAARANGDTEKRKMLEETTPDVLNAKGLLMFLR 290
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig14.2443.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JK21_9PHAE3.910e-1868.66MYB protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig14contigH-paniculata_contig14:67140..69382 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig14.2443.1mRNA_H-paniculata_contig14.2443.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig14 67130..69382 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig14.2443.1 ID=prot_H-paniculata_contig14.2443.1|Name=mRNA_H-paniculata_contig14.2443.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=211bp
MRGKSGEVCRGTSDASAAGLSTTKPPPGGRENNAAAAAAIAGGGGSSTAM
MSAQALFRGNIPGLTTFGRNEINNFHKEKALLLSAAKASGDSDKCTMIEE
TTPDVLNAHGLLMFLKKSSSSETDDNDDEEDEKEHDDDDGDDQTPALKTT
SELGSAASPITAVPGATAAAAAGVASDGETPGAAGGNAMHEGLRMFLKKS
LSSDDNSQSGG
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