prot_H-paniculata_contig1391.2396.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig1391.2396.1
Unique Name	prot_H-paniculata_contig1391.2396.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	138

Homology

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BLAST of mRNA_H-paniculata_contig1391.2396.1 vs. uniprot
Match: A0A6H5L313_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L313_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 4.360e-17
Identity = 55/144 (38.19%), Postives = 72/144 (50.00%), Query Frame = 0

Query:   24 KEEHICRTCARAAAGSNGGDGPPWTVS---TLVGGRVNRKRVLRFLEREATEGWPIGVFDFNMCVE--KPAVGADLK-------------------------RRPCSREGCDRESRFDSRFCCDACGVLDAESLLADAVVYSLE 137
            +EE +CR CAR   G+  G  P  T+    +LV  R  R ++L FLER+   G P GVFD  + +     A G +LK                         R PC+   C RESR DS+FCCDACGVL AE+ LA A+ + +E
Sbjct:  559 REETLCRACARITIGAPQGKDPTATLQKQLSLV--REKRTKMLEFLERDVETGTPCGVFDLPLNIRDVNTAGGVELKDGNAKGPAAGGNSNGGNGGVDMRDNRPPCAAASCGRESRQDSKFCCDACGVLHAEAFLAKAIRHHVE 700

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BLAST of mRNA_H-paniculata_contig1391.2396.1 vs. uniprot
Match: D8LQA3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQA3_ECTSI)

HSP 1 Score: 85.1 bits (209), Expect = 1.510e-16
Identity = 54/144 (37.50%), Postives = 72/144 (50.00%), Query Frame = 0

Query:   24 KEEHICRTCARAAAGSNGGDGPPWTVS---TLVGGRVNRKRVLRFLEREATEGWPIGVFDFNMCVEKPAV-------------------------GADLK--RRPCSREGCDRESRFDSRFCCDACGVLDAESLLADAVVYSLE 137
            +EE +CRTCAR A G+  G  P  T+    +LV  R  R ++L FLE +   G P GVFD  + +   +                          G D +  R PC+   C RESR DS+FCCDACGVL AE+ LA A+ + +E
Sbjct:  582 REETLCRTCARIAIGAPQGKDPTATLQKQLSLV--REKRTKMLEFLEEDVETGAPCGVFDLPLNIRDVSTAGGVGPKDGNANGPDAGGNSNGGNGGVDKRDNRPPCAAASCGRESRQDSKFCCDACGVLHAEAFLAKAIRHHVE 723

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig1391.2396.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig1391.2396.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5L313_9PHAE	4.360e-17	38.19	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LQA3_ECTSI	1.510e-16	37.50	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 20..138
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 3..14
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..19
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..2
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 15..19

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig1391	contig	H-paniculata_contig1391:16618..17647 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig1391.2396.1	mRNA_H-paniculata_contig1391.2396.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig1391 16618..17648 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig1391.2396.1 ID=prot_H-paniculata_contig1391.2396.1|Name=mRNA_H-paniculata_contig1391.2396.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=138bp
AVGAAAAAATTAATAISPAVPVVKEEHICRTCARAAAGSNGGDGPPWTVS
TLVGGRVNRKRVLRFLEREATEGWPIGVFDFNMCVEKPAVGADLKRRPCS
REGCDRESRFDSRFCCDACGVLDAESLLADAVVYSLEG