prot_H-paniculata_contig1389.2381.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1389.2381.1
Unique Nameprot_H-paniculata_contig1389.2381.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length158
Homology
BLAST of mRNA_H-paniculata_contig1389.2381.1 vs. uniprot
Match: D8LQ75_ECTSI (H15 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ75_ECTSI)

HSP 1 Score: 104 bits (260), Expect = 1.750e-25
Identity = 56/72 (77.78%), Postives = 59/72 (81.94%), Query Frame = 0
Query:    1 MVFQAIKELKERNGSSLPAIKKYIVTTYPEVATKFAPHQLRAALKKGTETGKFIKVKSSYKLSAEAKKPPPK 72
            MVF AIK LKERNGSS+ AIKK I  TYP  A  F PHQ+R+ALKKG ETGKFIKVKSSYKLSAEAKKP PK
Sbjct:    1 MVFDAIKSLKERNGSSIQAIKKSITATYP--ALNFTPHQMRSALKKGVETGKFIKVKSSYKLSAEAKKPVPK 70          
BLAST of mRNA_H-paniculata_contig1389.2381.1 vs. uniprot
Match: A0A6H5JHR9_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHR9_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 1.460e-24
Identity = 52/69 (75.36%), Postives = 58/69 (84.06%), Query Frame = 0
Query:    1 MVFQAIKELKERNGSSLPAIKKYIVTTYPEVATKFAPHQLRAALKKGTETGKFIKVKSSYKLSAEAKKP 69
            MVF AIK LKER GSSLPA+KK I+ TYP +   F PHQ+R+ALKKGTE+GKFIKVKSSYKLS EAKKP
Sbjct:    1 MVFDAIKALKERGGSSLPALKKQIMATYPSL--NFTPHQMRSALKKGTESGKFIKVKSSYKLSPEAKKP 67          
BLAST of mRNA_H-paniculata_contig1389.2381.1 vs. uniprot
Match: D7G4I5_ECTSI (H15 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4I5_ECTSI)

HSP 1 Score: 100 bits (250), Expect = 3.630e-24
Identity = 52/69 (75.36%), Postives = 58/69 (84.06%), Query Frame = 0
Query:    1 MVFQAIKELKERNGSSLPAIKKYIVTTYPEVATKFAPHQLRAALKKGTETGKFIKVKSSYKLSAEAKKP 69
            MVF AIK LKER GSSLPA+KK I+ TYP +   F PHQ+R+ALKKGTE+GKFIKVKSSYKLS EAKKP
Sbjct:   12 MVFDAIKALKERGGSSLPALKKQIMATYPSL--NFTPHQMRSALKKGTESGKFIKVKSSYKLSPEAKKP 78          
BLAST of mRNA_H-paniculata_contig1389.2381.1 vs. uniprot
Match: D8LQ80_ECTSI (Histone H1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ80_ECTSI)

HSP 1 Score: 99.8 bits (247), Expect = 5.800e-24
Identity = 52/72 (72.22%), Postives = 59/72 (81.94%), Query Frame = 0
Query:    1 MVFQAIKELKERNGSSLPAIKKYIVTTYPEVATKFAPHQLRAALKKGTETGKFIKVKSSYKLSAEAKKPPPK 72
            MVF AIK LKERNGSS+ AIKK I  TYP +   F PHQ+R+ALKKG E+GKFIK+K+SYKLSAEAKKP PK
Sbjct:   11 MVFDAIKTLKERNGSSIQAIKKSITATYPTL--NFTPHQMRSALKKGVESGKFIKMKASYKLSAEAKKPAPK 80          
BLAST of mRNA_H-paniculata_contig1389.2381.1 vs. uniprot
Match: A0A6H5KST0_9PHAE (H15 domain-containing protein n=6 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KST0_9PHAE)

HSP 1 Score: 99.4 bits (246), Expect = 1.300e-23
Identity = 51/72 (70.83%), Postives = 59/72 (81.94%), Query Frame = 0
Query:    1 MVFQAIKELKERNGSSLPAIKKYIVTTYPEVATKFAPHQLRAALKKGTETGKFIKVKSSYKLSAEAKKPPPK 72
            MVF AIK LKERNGSS+ AIKK I  TYP +   F PHQ+R+ALKKG E+GKF+K+K+SYKLSAEAKKP PK
Sbjct:    1 MVFDAIKTLKERNGSSIQAIKKSITATYPTL--NFTPHQMRSALKKGVESGKFVKMKASYKLSAEAKKPAPK 70          
BLAST of mRNA_H-paniculata_contig1389.2381.1 vs. uniprot
Match: A0A6H5KCU1_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCU1_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 3.140e-21
Identity = 50/71 (70.42%), Postives = 56/71 (78.87%), Query Frame = 0
Query:    1 MVFQAIKELKERNGSSLPAIKKYIVTTYPEVATKFAPHQLRAALKKGTETGKFIKVKSSYKLSAEAKKPPP 71
            MVF AIK LKERNGSS+ AIKK I  TYP +   F PHQ+R ALKKG E+GKFIK+K+SYKLS EAKKP P
Sbjct:  104 MVFDAIKTLKERNGSSIQAIKKSITATYPTL--NFTPHQMRGALKKGVESGKFIKMKASYKLSPEAKKPAP 172          
BLAST of mRNA_H-paniculata_contig1389.2381.1 vs. uniprot
Match: D8LMF1_ECTSI (H15 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMF1_ECTSI)

HSP 1 Score: 93.2 bits (230), Expect = 3.550e-21
Identity = 49/66 (74.24%), Postives = 54/66 (81.82%), Query Frame = 0
Query:    5 AIKELKERNGSSLPAIKKYIVTTYPEVATKFAPHQLRAALKKGTETGKFIKVKSSYKLSAEAKKPP 70
            AI  LKERNGSS+PAIKK+I  TYP +   F PHQLR ALKKGTETG FIKVK+SYK+S EAKKPP
Sbjct:   11 AILALKERNGSSVPAIKKHIQATYPTL--NFLPHQLRGALKKGTETGTFIKVKASYKVSPEAKKPP 74          
BLAST of mRNA_H-paniculata_contig1389.2381.1 vs. uniprot
Match: A0A7S2Y1F8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1F8_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 3.360e-18
Identity = 50/76 (65.79%), Postives = 53/76 (69.74%), Query Frame = 0
Query:    1 MVFQAIKELKERNGSSLPAIKKYIVTTYPEVATKFAPHQLRAALKKGTETGKFIKVKSSYKLSAEAKKPPPKKVVK 76
            M   AI  LK+R GSSLPAIK YI   YP V  KF PH LRAALKK  E GK IKVK+SYKLSA+ KKP  KKV K
Sbjct:    7 MAKAAILALKDRTGSSLPAIKAYITANYPSV--KFLPHALRAALKKAVEAGKLIKVKASYKLSADEKKP--KKVAK 78          
BLAST of mRNA_H-paniculata_contig1389.2381.1 vs. uniprot
Match: A0A6H5K9S6_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9S6_9PHAE)

HSP 1 Score: 79.0 bits (193), Expect = 1.400e-16
Identity = 41/63 (65.08%), Postives = 48/63 (76.19%), Query Frame = 0
Query:    1 MVFQAIKELKERNGSSLPAIKKYIVTTYPEVATKFAPHQLRAALKKGTETGKFIKVKSSYKLS 63
            MVF AIK LKERNGSS+ A+KK I  TYP  A  F PHQ+R+ALKKG ETGKFIKV+ +  L+
Sbjct:    1 MVFDAIKTLKERNGSSIQAMKKSITATYP--ALHFTPHQMRSALKKGVETGKFIKVRHALPLA 61          
BLAST of mRNA_H-paniculata_contig1389.2381.1 vs. uniprot
Match: D8LJB8_ECTSI (H15 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJB8_ECTSI)

HSP 1 Score: 80.5 bits (197), Expect = 3.320e-15
Identity = 42/69 (60.87%), Postives = 53/69 (76.81%), Query Frame = 0
Query:    1 MVFQAIKELKERNGSSLPAIKKYIVTTYPEVATKFAPHQLRAALKKGTETGKFIKVKSSYKLSAEAKKP 69
            M  +A+K LKERNGSSL AIKK+I  +YP +   F  H +R+ALKKG E+GKFIKVK+SYKLSA  ++P
Sbjct:    7 MTIEAVKALKERNGSSLFAIKKHITASYPSLT--FTAHFMRSALKKGVESGKFIKVKNSYKLSAYRQEP 73          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1389.2381.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQ75_ECTSI1.750e-2577.78H15 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JHR9_9PHAE1.460e-2475.36H15 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G4I5_ECTSI3.630e-2475.36H15 domain-containing protein n=2 Tax=Ectocarpus T... [more]
D8LQ80_ECTSI5.800e-2472.22Histone H1 n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
A0A6H5KST0_9PHAE1.300e-2370.83H15 domain-containing protein n=6 Tax=Ectocarpus T... [more]
A0A6H5KCU1_9PHAE3.140e-2170.42H15 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LMF1_ECTSI3.550e-2174.24H15 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S2Y1F8_9STRA3.360e-1865.79Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6H5K9S6_9PHAE1.400e-1665.08H15 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LJB8_ECTSI3.320e-1560.87H15 domain-containing protein n=1 Tax=Ectocarpus s... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005818Linker histone H1/H5, domain H15SMARTSM00526h15plus2coord: 1..59
e-value: 2.0E-14
score: 64.0
IPR005818Linker histone H1/H5, domain H15PFAMPF00538Linker_histonecoord: 1..62
e-value: 4.2E-18
score: 65.5
IPR005818Linker histone H1/H5, domain H15PROSITEPS51504H15coord: 1..64
score: 26.829
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 1..69
e-value: 3.3E-16
score: 60.9
NoneNo IPR availablePANTHERPTHR11467HISTONE H1coord: 1..155
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 1..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1389contigH-paniculata_contig1389:7969..9650 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1389.2381.1mRNA_H-paniculata_contig1389.2381.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1389 7969..9650 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1389.2381.1 ID=prot_H-paniculata_contig1389.2381.1|Name=mRNA_H-paniculata_contig1389.2381.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=158bp
MVFQAIKELKERNGSSLPAIKKYIVTTYPEVATKFAPHQLRAALKKGTET
GKFIKVKSSYKLSAEAKKPPPKKVVKKVVKKPAPKKVVKKTPKKVMKTPK
KKAVKKKVVKKVVKKTATKKAAVSTPKKKVVKKPAAKKATLKKPAPKKVA
KKPAAPK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005818Histone_H1/H5_H15
IPR036388WH-like_DNA-bd_sf
IPR036390WH_DNA-bd_sf