prot_H-paniculata_contig13200.2009.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig13200.2009.1
Unique Nameprot_H-paniculata_contig13200.2009.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length316
Homology
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BLAST of mRNA_H-paniculata_contig13200.2009.1 vs. uniprot
Match: A0A6H5KX93_9PHAE (C2H2-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KX93_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 3.870e-12
Identity = 38/51 (74.51%), Postives = 42/51 (82.35%), Query Frame = 0 
Query:  266 ARSLRPNSAALSAIIRGDRRANMRMDRAQFDGAQTRLRNLAPEGNEVKDKF 316
            AR+ RPNSAAL  I+R DRR N+RMDR QFDGAQTRLR LAPEGN+V D F
Sbjct:  289 ARAARPNSAALVNILRSDRRTNIRMDREQFDGAQTRLRKLAPEGNDVCDNF 339
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig13200.2009.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KX93_9PHAE3.870e-1274.51C2H2-type domain-containing protein n=2 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig13200contigH-paniculata_contig13200:939..1985 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig13200.2009.1mRNA_H-paniculata_contig13200.2009.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig13200 939..1985 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig13200.2009.1 ID=prot_H-paniculata_contig13200.2009.1|Name=mRNA_H-paniculata_contig13200.2009.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=316bp
MKKQYRRRQDSSSGEESQEEGEVGQAPPPSKLARDSDGASRPASGPLDED
RDKRRERARDDEQRRRGSGDERGSRSSRRHDDNKGSGAGRDRSTRDVDGR
WASMPDYGRDRDHSRDRDMDRDRDRERDRHRDREKDRSGRDSKRSAGGTY
SSLADRRDIDPRRQQQQYHEAPGRDRDGESYRGRSGDRPREAPREDPAPR
ESSGNSGSKQSRGIFSYIAGSKDGGGGGGGGGGGGGGGVGGSTPTQPAGN
AENATDSTTPRDSEEARSLRPNSAALSAIIRGDRRANMRMDRAQFDGAQT
RLRNLAPEGNEVKDKF
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