prot_H-paniculata_contig12829.1778.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig12829.1778.1
Unique Name	prot_H-paniculata_contig12829.1778.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	201

Homology

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BLAST of mRNA_H-paniculata_contig12829.1778.1 vs. uniprot
Match: D8LH04_ECTSI (Recombinase A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LH04_ECTSI)

HSP 1 Score: 353 bits (905), Expect = 1.290e-118
Identity = 190/201 (94.53%), Postives = 197/201 (98.01%), Query Frame = 0

Query:    1 MTLDIALGGGYPRGRVVEIFGPESSGKTTLALHALAEIQKTGGVAAFIDAEHALDPAYAERLGVDVDNLLVSQPDSGEMALDVVDQLVRSNAVDMVVVDSVAALVPRAELEGEMADMQMGLQARLMSKARNAMRKVTGSLSKSQCTVVFINQLRSKIGVIYGSPEVTSGGNALKYYSSVRLDVRKKEALRDNSGITVKVKV 201
            MTLDIALGGGYPRGRVVEI+GPESSGKTTLALHALAEIQKTGGVAAFIDAEHALDPAYA+RLGVDV +LLVSQPDSGEMALDVVDQLVRSNAVDMVVVDSVAALVPRAELEGEMADMQMGLQARLMSKA   MRKVTGSLSKSQCTVVF+NQLRSKIGVIYGSPEVTSGGNALKYYSSVRLDVR+KE+LRDN+GITVKVKV
Sbjct:  119 MTLDIALGGGYPRGRVVEIYGPESSGKTTLALHALAEIQKTGGVAAFIDAEHALDPAYADRLGVDVADLLVSQPDSGEMALDVVDQLVRSNAVDMVVVDSVAALVPRAELEGEMADMQMGLQARLMSKA---MRKVTGSLSKSQCTVVFLNQLRSKIGVIYGSPEVTSGGNALKYYSSVRLDVRRKESLRDNAGITVKVKV 316

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BLAST of mRNA_H-paniculata_contig12829.1778.1 vs. uniprot
Match: K0SIK3_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SIK3_THAOC)

HSP 1 Score: 315 bits (808), Expect = 1.240e-104
Identity = 163/201 (81.09%), Postives = 184/201 (91.54%), Query Frame = 0

Query:    1 MTLDIALGGGYPRGRVVEIFGPESSGKTTLALHALAEIQKTGGVAAFIDAEHALDPAYAERLGVDVDNLLVSQPDSGEMALDVVDQLVRSNAVDMVVVDSVAALVPRAELEGEMADMQMGLQARLMSKARNAMRKVTGSLSKSQCTVVFINQLRSKIGVIYGSPEVTSGGNALKYYSSVRLDVRKKEALRDNSGITVKVKV 201
            MTLD ALGGGYP+GRVVEI+GPESSGKTTLALHALAE Q  GG+AAF+DAEHALDP+YA  LGVDVDNLLVSQPDSGEMALD+VDQLVRS+AVD++VVDSVAALVPRAELEGEM+DMQ+GLQARLMSKA   MRK+T SLS SQCTV+F+NQLRSK+GVIYGSPEVTSGGNALK+Y+SVRLD R++E L +N GI  KVK+
Sbjct:  101 MTLDTALGGGYPKGRVVEIYGPESSGKTTLALHALAEAQMNGGIAAFVDAEHALDPSYAAALGVDVDNLLVSQPDSGEMALDIVDQLVRSSAVDVIVVDSVAALVPRAELEGEMSDMQVGLQARLMSKA---MRKITASLSMSQCTVIFLNQLRSKVGVIYGSPEVTSGGNALKFYASVRLDTRRREVLPENMGIRAKVKI 298

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BLAST of mRNA_H-paniculata_contig12829.1778.1 vs. uniprot
Match: B7FQ63_PHATC (Chloroplast-targeted nuclear-encoded recombinase n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FQ63_PHATC)

HSP 1 Score: 316 bits (809), Expect = 2.230e-104
Identity = 164/201 (81.59%), Postives = 186/201 (92.54%), Query Frame = 0

Query:    1 MTLDIALGGGYPRGRVVEIFGPESSGKTTLALHALAEIQKTGGVAAFIDAEHALDPAYAERLGVDVDNLLVSQPDSGEMALDVVDQLVRSNAVDMVVVDSVAALVPRAELEGEMADMQMGLQARLMSKARNAMRKVTGSLSKSQCTVVFINQLRSKIGVIYGSPEVTSGGNALKYYSSVRLDVRKKEALRDNSGITVKVKV 201
            +TLD ALGGG+P+GRVVEI+GPESSGKTTLALHA+AE QK GG AAF+DAEHALDPAYA +LGVD+DNLLVSQPDSGEMALDVVDQLVRS AVD++VVDSVAALVPRAELEG+M+D Q+GLQARLMSKA   MRK+TGSL+ SQCTV+F+NQLRSK+GVIYGSPEVTSGGNALK+Y+SVRLD R+KE L +NSGI VKVKV
Sbjct:  118 LTLDAALGGGFPKGRVVEIYGPESSGKTTLALHAIAESQKVGGTAAFVDAEHALDPAYAAKLGVDIDNLLVSQPDSGEMALDVVDQLVRSAAVDVIVVDSVAALVPRAELEGDMSDAQIGLQARLMSKA---MRKITGSLALSQCTVIFLNQLRSKVGVIYGSPEVTSGGNALKFYASVRLDTRRKEILPENSGIRVKVKV 315

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BLAST of mRNA_H-paniculata_contig12829.1778.1 vs. uniprot
Match: A0A7R9UET2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UET2_9STRA)

HSP 1 Score: 314 bits (804), Expect = 9.950e-104
Identity = 159/201 (79.10%), Postives = 185/201 (92.04%), Query Frame = 0

Query:    1 MTLDIALGGGYPRGRVVEIFGPESSGKTTLALHALAEIQKTGGVAAFIDAEHALDPAYAERLGVDVDNLLVSQPDSGEMALDVVDQLVRSNAVDMVVVDSVAALVPRAELEGEMADMQMGLQARLMSKARNAMRKVTGSLSKSQCTVVFINQLRSKIGVIYGSPEVTSGGNALKYYSSVRLDVRKKEALRDNSGITVKVKV 201
            MTLD+ALGGGYP+GRV+EI+GPESSGKTTLALHA+AE+QK GG+AAFIDAEHALDP+YA  LGV VDNLLVSQPDSGEMALD+VDQL+RS AV+++VVDSVAALVPR EL+G+M D Q+G QARLMSKA   +RK+TGSL+KS C+V+F+NQLRSK+GVIYGSPEVTSGGNALKYYSS+RLDVR+KE  R+N GITVKVKV
Sbjct:   95 MTLDLALGGGYPKGRVIEIYGPESSGKTTLALHAIAEVQKAGGMAAFIDAEHALDPSYAGNLGVHVDNLLVSQPDSGEMALDIVDQLIRSRAVEVIVVDSVAALVPRVELDGDMTDQQIGAQARLMSKA---LRKITGSLAKSNCSVIFLNQLRSKVGVIYGSPEVTSGGNALKYYSSLRLDVRRKEITRENKGITVKVKV 292

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BLAST of mRNA_H-paniculata_contig12829.1778.1 vs. uniprot
Match: B5YLR6_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YLR6_THAPS)

HSP 1 Score: 313 bits (803), Expect = 1.640e-103
Identity = 160/201 (79.60%), Postives = 186/201 (92.54%), Query Frame = 0

Query:    1 MTLDIALGGGYPRGRVVEIFGPESSGKTTLALHALAEIQKTGGVAAFIDAEHALDPAYAERLGVDVDNLLVSQPDSGEMALDVVDQLVRSNAVDMVVVDSVAALVPRAELEGEMADMQMGLQARLMSKARNAMRKVTGSLSKSQCTVVFINQLRSKIGVIYGSPEVTSGGNALKYYSSVRLDVRKKEALRDNSGITVKVKV 201
            +TLD+ALGGGYP+GRV+EI+GPESSGKTTLALHALAE Q++GG+AAF+DAEHALDPAYA  LGVD+D+LLVSQPDSGEMALD+VDQLVRS AVD++VVDSVAALVPRAELEG+M+DMQ+GLQARLMSKA   +RK+T SLS SQCTV+F+NQLRSK+GVIYGSPEVTSGGNALK+Y+SVRLD R++E L DN GI  KVKV
Sbjct:  108 LTLDVALGGGYPKGRVIEIYGPESSGKTTLALHALAEAQQSGGIAAFVDAEHALDPAYAAALGVDIDSLLVSQPDSGEMALDIVDQLVRSAAVDVIVVDSVAALVPRAELEGDMSDMQVGLQARLMSKA---LRKITSSLSLSQCTVIFLNQLRSKVGVIYGSPEVTSGGNALKFYASVRLDTRRREVLPDNMGIRAKVKV 305

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BLAST of mRNA_H-paniculata_contig12829.1778.1 vs. uniprot
Match: A0A7S2XS40_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XS40_9STRA)

HSP 1 Score: 313 bits (801), Expect = 5.890e-103
Identity = 160/201 (79.60%), Postives = 185/201 (92.04%), Query Frame = 0

Query:    1 MTLDIALGGGYPRGRVVEIFGPESSGKTTLALHALAEIQKTGGVAAFIDAEHALDPAYAERLGVDVDNLLVSQPDSGEMALDVVDQLVRSNAVDMVVVDSVAALVPRAELEGEMADMQMGLQARLMSKARNAMRKVTGSLSKSQCTVVFINQLRSKIGVIYGSPEVTSGGNALKYYSSVRLDVRKKEALRDNSGITVKVKV 201
            +TLD ALG G+P+GR+VEI+GPESSGKTTLALHA+AE QK GG AAF+DAEHALDP YA+ LGVD+D LLVSQPDSGEMALD+VDQLVRS+AVD+VVVDSVAALVPRAELEG+M+DMQ+GLQARLMSKA   MRK+TGSL+ SQCTV+FINQLRSK+GVIYGSPEVT+GGNALK+Y+S+RLD R+KE L DN+GI VKVKV
Sbjct:  132 LTLDAALGNGFPKGRIVEIYGPESSGKTTLALHAIAESQKIGGTAAFVDAEHALDPVYAKNLGVDIDKLLVSQPDSGEMALDIVDQLVRSSAVDVVVVDSVAALVPRAELEGDMSDMQIGLQARLMSKA---MRKITGSLAMSQCTVIFINQLRSKVGVIYGSPEVTAGGNALKFYASIRLDTRRKEVLPDNAGIRVKVKV 329

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BLAST of mRNA_H-paniculata_contig12829.1778.1 vs. uniprot
Match: A0A7S3Q144_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q144_9STRA)

HSP 1 Score: 312 bits (799), Expect = 1.110e-102
Identity = 160/201 (79.60%), Postives = 186/201 (92.54%), Query Frame = 0

Query:    1 MTLDIALGGGYPRGRVVEIFGPESSGKTTLALHALAEIQKTGGVAAFIDAEHALDPAYAERLGVDVDNLLVSQPDSGEMALDVVDQLVRSNAVDMVVVDSVAALVPRAELEGEMADMQMGLQARLMSKARNAMRKVTGSLSKSQCTVVFINQLRSKIGVIYGSPEVTSGGNALKYYSSVRLDVRKKEALRDNSGITVKVKV 201
            +TLD ALGGGYP+GRV+EI+GPESSGKTTLA+HA+AE QK GGVAAF+DAEHALDPAYA +LG+ VD+LLVSQPDSGEMALD+VDQLVRS+AVD++VVDSVAALVPRAELEG+M+D Q+GLQARLMSKA   MRK+TGSL+ S+CTV+FINQLRSK+GVIYGSPEVTSGG ALK+YSSVRLD+R+KE L DN+GI  KVKV
Sbjct:  115 LTLDAALGGGYPKGRVIEIYGPESSGKTTLAMHAIAESQKAGGVAAFVDAEHALDPAYASKLGIVVDDLLVSQPDSGEMALDIVDQLVRSSAVDVIVVDSVAALVPRAELEGDMSDQQIGLQARLMSKA---MRKITGSLAMSKCTVIFINQLRSKVGVIYGSPEVTSGGMALKFYSSVRLDIRRKEVLPDNAGIRAKVKV 312

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BLAST of mRNA_H-paniculata_contig12829.1778.1 vs. uniprot
Match: A0A7S0GDS0_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GDS0_9STRA)

HSP 1 Score: 308 bits (790), Expect = 1.830e-101
Identity = 161/201 (80.10%), Postives = 183/201 (91.04%), Query Frame = 0

Query:    1 MTLDIALGGGYPRGRVVEIFGPESSGKTTLALHALAEIQKTGGVAAFIDAEHALDPAYAERLGVDVDNLLVSQPDSGEMALDVVDQLVRSNAVDMVVVDSVAALVPRAELEGEMADMQMGLQARLMSKARNAMRKVTGSLSKSQCTVVFINQLRSKIGVIYGSPEVTSGGNALKYYSSVRLDVRKKEALRDNSGITVKVKV 201
            +TLD ALGGGYPRGRVVEI+GPESSGKTTLALHA+A  QK GG AAFIDAEHALDP+Y +RLGVDVD LLVSQPDSGEMALD+VDQLVRS+A+D++VVDSVAALVPRAELEG+M+D Q+GLQARLMSKA   +RK+TGSL+ SQ TV+FINQLRSK+GVIYGSPEVTSGGNALK+Y+SVRLD R+KE L +NSGI  KVKV
Sbjct:  125 LTLDAALGGGYPRGRVVEIYGPESSGKTTLALHAIASAQKDGGTAAFIDAEHALDPSYCDRLGVDVDALLVSQPDSGEMALDIVDQLVRSSALDVIVVDSVAALVPRAELEGDMSDQQIGLQARLMSKA---LRKITGSLAMSQTTVIFINQLRSKVGVIYGSPEVTSGGNALKFYASVRLDTRRKEVLPENSGIRCKVKV 322

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BLAST of mRNA_H-paniculata_contig12829.1778.1 vs. uniprot
Match: A0A6U9ZCX2_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A6U9ZCX2_9STRA)

HSP 1 Score: 308 bits (789), Expect = 3.110e-101
Identity = 161/202 (79.70%), Postives = 184/202 (91.09%), Query Frame = 0

Query:    1 MTLDIALGGG-YPRGRVVEIFGPESSGKTTLALHALAEIQKTGGVAAFIDAEHALDPAYAERLGVDVDNLLVSQPDSGEMALDVVDQLVRSNAVDMVVVDSVAALVPRAELEGEMADMQMGLQARLMSKARNAMRKVTGSLSKSQCTVVFINQLRSKIGVIYGSPEVTSGGNALKYYSSVRLDVRKKEALRDNSGITVKVKV 201
            +TLD ALGGG +P+GRVVEI+GPESSGKTTLALH +AE QK GG AAF+DAEHALDP YAE LG+DVD+LLVSQPD GEMALD+VD+LVRS+AVDM+VVDSVAALVPRAELEG+M+D Q+GLQARLMSKA   MRK+TGSL+ SQCTV+F+NQLRSK+GVIYGSPEVTSGGNALK+YSSVRLD R+KE L DN+GI VKVKV
Sbjct:  124 LTLDAALGGGGFPKGRVVEIYGPESSGKTTLALHGIAECQKNGGTAAFVDAEHALDPVYAEALGIDVDDLLVSQPDCGEMALDIVDKLVRSSAVDMIVVDSVAALVPRAELEGDMSDTQIGLQARLMSKA---MRKITGSLALSQCTVIFLNQLRSKVGVIYGSPEVTSGGNALKFYSSVRLDTRRKEILPDNAGIRVKVKV 322

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BLAST of mRNA_H-paniculata_contig12829.1778.1 vs. uniprot
Match: M2VY23_GALSU (Recombination protein RecA n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VY23_GALSU)

HSP 1 Score: 305 bits (781), Expect = 1.310e-100
Identity = 154/201 (76.62%), Postives = 183/201 (91.04%), Query Frame = 0

Query:    1 MTLDIALGGGYPRGRVVEIFGPESSGKTTLALHALAEIQKTGGVAAFIDAEHALDPAYAERLGVDVDNLLVSQPDSGEMALDVVDQLVRSNAVDMVVVDSVAALVPRAELEGEMADMQMGLQARLMSKARNAMRKVTGSLSKSQCTVVFINQLRSKIGVIYGSPEVTSGGNALKYYSSVRLDVRKKEALRDNSGITVKVKV 201
            +TLD ALGGGYPRGR+VEIFGPESSGKTTLALHA+AE+QK+GGVAAF+DAEHALDPAY   LGVD+ +LLVSQPD+GEMAL++VDQLVRS AVD+VV+DSVAALVPR+E+EG+M D QMG QARLMSKA   +RK+TGS+S+SQCTV+F+NQLR KIGV++GSPEVTSGG ALKYYSSVRLD+R+K+ L+DN GI  KVK+
Sbjct:  100 VTLDAALGGGYPRGRLVEIFGPESSGKTTLALHAIAEVQKSGGVAAFVDAEHALDPAYGSALGVDIQSLLVSQPDTGEMALEIVDQLVRSAAVDIVVIDSVAALVPRSEIEGDMNDQQMGAQARLMSKA---LRKITGSMSRSQCTVIFLNQLRQKIGVLFGSPEVTSGGMALKYYSSVRLDIRRKDTLKDNVGIRCKVKI 297

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig12829.1778.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig12829.1778.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LH04_ECTSI	1.290e-118	94.53	Recombinase A n=2 Tax=Ectocarpus TaxID=2879 RepID=...	[more]
K0SIK3_THAOC	1.240e-104	81.09	Uncharacterized protein n=1 Tax=Thalassiosira ocea...	[more]
B7FQ63_PHATC	2.230e-104	81.59	Chloroplast-targeted nuclear-encoded recombinase n...	[more]
A0A7R9UET2_9STRA	9.950e-104	79.10	Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi...	[more]
B5YLR6_THAPS	1.640e-103	79.60	Predicted protein n=1 Tax=Thalassiosira pseudonana...	[more]
A0A7S2XS40_9STRA	5.890e-103	79.60	Hypothetical protein n=1 Tax=Attheya septentrional...	[more]
A0A7S3Q144_9STRA	1.110e-102	79.60	Hypothetical protein n=1 Tax=Chaetoceros debilis T...	[more]
A0A7S0GDS0_9STRA	1.830e-101	80.10	Hypothetical protein n=1 Tax=Proboscia inermis Tax...	[more]
A0A6U9ZCX2_9STRA	3.110e-101	79.70	Hypothetical protein n=1 Tax=Pseudo-nitzschia aust...	[more]
M2VY23_GALSU	1.310e-100	76.62	Recombination protein RecA n=1 Tax=Galdieria sulph...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013765	DNA recombination and repair protein RecA	PRINTS	PR00142	RECA	coord: 121..150 score: 27.82 coord: 169..197 score: 49.19 coord: 49..78 score: 75.28 coord: 83..112 score: 67.66
IPR013765	DNA recombination and repair protein RecA	TIGRFAM	TIGR02012	TIGR02012	coord: 1..201 e-value: 2.4E-100 score: 334.0
IPR013765	DNA recombination and repair protein RecA	PFAM	PF00154	RecA	coord: 1..200 e-value: 3.7E-101 score: 338.0
IPR013765	DNA recombination and repair protein RecA	PANTHER	PTHR45900:SF1	MITOCHONDRIAL DNA REPAIR PROTEIN RECA HOMOLOG	coord: 1..201
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 13..187 e-value: 1.0E-10 score: 51.6
None	No IPR available	GENE3D	3.40.50.300		coord: 1..201 e-value: 1.1E-69 score: 237.1
None	No IPR available	PANTHER	PTHR45900	FAMILY NOT NAMED	coord: 1..201
IPR020587	DNA recombination and repair protein RecA, monomer-monomer interface	PROSITE	PS50163	RECA_3	coord: 158..201 score: 19.014
IPR020588	DNA recombination and repair protein RecA-like, ATP-binding domain	PROSITE	PS50162	RECA_2	coord: 1..153 score: 29.806
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 2..191

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig12829	contig	H-paniculata_contig12829:80..6894 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig12829.1778.1	mRNA_H-paniculata_contig12829.1778.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig12829 80..6900 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig12829.1778.1 ID=prot_H-paniculata_contig12829.1778.1|Name=mRNA_H-paniculata_contig12829.1778.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=201bp
MTLDIALGGGYPRGRVVEIFGPESSGKTTLALHALAEIQKTGGVAAFIDA
EHALDPAYAERLGVDVDNLLVSQPDSGEMALDVVDQLVRSNAVDMVVVDS
VAALVPRAELEGEMADMQMGLQARLMSKARNAMRKVTGSLSKSQCTVVFI
NQLRSKIGVIYGSPEVTSGGNALKYYSSVRLDVRKKEALRDNSGITVKVK
V

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013765	DNA_recomb/repair_RecA
IPR003593	AAA+_ATPase
IPR020587	RecA_monomer-monomer_interface
IPR020588	RecA_ATP-bd
IPR027417	P-loop_NTPase