prot_H-paniculata_contig12826.1776.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig12826.1776.1
Unique Nameprot_H-paniculata_contig12826.1776.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length265
Homology
BLAST of mRNA_H-paniculata_contig12826.1776.1 vs. uniprot
Match: A0A6H5LL14_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL14_9PHAE)

HSP 1 Score: 227 bits (579), Expect = 1.960e-66
Identity = 120/265 (45.28%), Postives = 168/265 (63.40%), Query Frame = 0
Query:    4 PDAFPPEIWELFLQSNLTALGEKCRSICLGSTMRRTLAAVVVRQYKPKLEEVNLSERQYGVAVSGGAELMSLRAKAHQQVGHWLISVDYINAFNSVKRAAILEEVAIHTPGLTPFVAKCYGEKLVDIIFQMDTGERRIMSSETGIHQGDGLGPALFCMPIRPFLCKCQEQLEALGVGLLAYLDDL-GLAMGELTEENLRAIHFLVQELARIEVQINNAKTKALSSMNH--TPTEREIATLTAMGISVAEGGGAVVVGTPFGTDAF 265
            P+AFPPE W L+ QS+L ALGEKCR +C+G T RR +AA  VR++KPKLEE+     Q+GVAV+GG E +++ A+   Q GHW++  D  NAFN+ KR AI+ + A   P L  ++A+CY E     I+ MD+GERR +  ++G+ QGDG+GP LFC  + P + K + + + LGV L AY+DD+  L    +T EN++ I  LV EL  + + +N  K+ AL    H  TP ER +  L   G+ +AE G   VVG P GTDA+
Sbjct:   55 PNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFTLVPIVLKLRAKYDNLGVRLKAYMDDIISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRL--LGDAGLPIAEEG-ITVVGVPIGTDAY 316          
BLAST of mRNA_H-paniculata_contig12826.1776.1 vs. uniprot
Match: A0A6H5KKQ2_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKQ2_9PHAE)

HSP 1 Score: 228 bits (581), Expect = 5.680e-66
Identity = 119/267 (44.57%), Postives = 168/267 (62.92%), Query Frame = 0
Query:    1 MEKPDAFPPEIWELFLQSNLTALGEKCRSICLGSTMRRTLAAVVVRQYKPKLEEVNLSERQYGVAVSGGAELMSLRAKAHQQVGHWLISVDYINAFNSVKRAAILEEVAIHTPGLTPFVAKCYGEKLVDIIFQMDTGERRIMSSETGIHQGDGLGPALFCMPIRPFLCKCQEQLEALGVGLLAYLDDLGLAMGELTEENLRAIHFLVQELARIEVQINNAKTKALSSMNH--TPTEREIATLTAMGISVAEGGGAVVVGTPFGTDAF 265
            ++ P AFPPE W L  QS+L ALGEKCR +C+G T RR +AA  VR++KPKLEE+     Q+GVAV+GG E +++ A+   Q GHW++  D  NAFN+ KR AI+ + +   P L  ++A+CY E     I+ MD+GERR +  ++G+ QGDG+GP LFC  + P + K + + + LGV L AY+DD+ L   ++T EN++    LV EL  + + +N  K+ AL    H  TPTER    L   G+ +AE G   VVG P GTDA+
Sbjct:  420 IKDPHAFPPEFWTLLKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAIDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQASKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKDITAENIQVTPDLVDELEAVGIIVNRGKSSALPPPGHDVTPTERR--PLGDAGLPIAEEG-ITVVGVPIGTDAY 683          
BLAST of mRNA_H-paniculata_contig12826.1776.1 vs. uniprot
Match: A0A6H5K0V7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0V7_9PHAE)

HSP 1 Score: 221 bits (564), Expect = 9.970e-66
Identity = 115/264 (43.56%), Postives = 164/264 (62.12%), Query Frame = 0
Query:    4 PDAFPPEIWELFLQSNLTALGEKCRSICLGSTMRRTLAAVVVRQYKPKLEEVNLSERQYGVAVSGGAELMSLRAKAHQQVGHWLISVDYINAFNSVKRAAILEEVAIHTPGLTPFVAKCYGEKLVDIIFQMDTGERRIMSSETGIHQGDGLGPALFCMPIRPFLCKCQEQLEALGVGLLAYLDDLGLAMGELTEENLRAIHFLVQELARIEVQINNAKTKALSSMNH--TPTEREIATLTAMGISVAEGGGAVVVGTPFGTDAF 265
            P+  PPE W L+ QS+L ALGEKCR +C+G T RR +AA  VR++KPKLEE+     Q+GVAV+GG E +++ A+   Q GHW++  D  +AFN+ KR  I+ + A   P +  ++A+CY E     I+ MD+GERR +  ++G+ QGDG+GP LFC  + P + K +   + LGV L AY+DD+ L    +T EN++ I  LV EL  + + +N  K+ AL    H  TP ER +  L   G+ +AE G   VVG P GTDA+
Sbjct:   48 PNTVPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSDAFNTGKRTVIMAQAAKSVPDVLGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAMYDHLGVCLKAYMDDISLHFNNITAENIQLIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRL--LGDAGLPIAEEG-ITVVGVPIGTDAY 308          
BLAST of mRNA_H-paniculata_contig12826.1776.1 vs. uniprot
Match: A0A6H5KMQ2_9PHAE (Reverse transcriptase domain-containing protein n=16 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ2_9PHAE)

HSP 1 Score: 231 bits (588), Expect = 1.500e-65
Identity = 120/264 (45.45%), Postives = 168/264 (63.64%), Query Frame = 0
Query:    4 PDAFPPEIWELFLQSNLTALGEKCRSICLGSTMRRTLAAVVVRQYKPKLEEVNLSERQYGVAVSGGAELMSLRAKAHQQVGHWLISVDYINAFNSVKRAAILEEVAIHTPGLTPFVAKCYGEKLVDIIFQMDTGERRIMSSETGIHQGDGLGPALFCMPIRPFLCKCQEQLEALGVGLLAYLDDLGLAMGELTEENLRAIHFLVQELARIEVQINNAKTKALSSMNH--TPTEREIATLTAMGISVAEGGGAVVVGTPFGTDAF 265
            P+AFPPE W L+ QS+L ALGEKCR +C+G T RR +AA  VR++KPKLEE+     Q+GVAV+GG E +++ A+   Q GHW++  D  NAFN+ KR AI+ + A   P L  ++A+CY E     I+ MD+GERR +  ++G+ QGDG+GP LFC  + P + K + + + LGV L AY+DD+ L    +T EN++ I  LV EL  + + +N  K+ AL    H  TP ER +  L   G+ +AE G   VVG P GTDA+
Sbjct:  424 PNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYAMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRL--LGDAGLPIAEEG-ITVVGVPIGTDAY 684          
BLAST of mRNA_H-paniculata_contig12826.1776.1 vs. uniprot
Match: A0A6H5JI32_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI32_9PHAE)

HSP 1 Score: 226 bits (575), Expect = 1.440e-64
Identity = 118/264 (44.70%), Postives = 166/264 (62.88%), Query Frame = 0
Query:    4 PDAFPPEIWELFLQSNLTALGEKCRSICLGSTMRRTLAAVVVRQYKPKLEEVNLSERQYGVAVSGGAELMSLRAKAHQQVGHWLISVDYINAFNSVKRAAILEEVAIHTPGLTPFVAKCYGEKLVDIIFQMDTGERRIMSSETGIHQGDGLGPALFCMPIRPFLCKCQEQLEALGVGLLAYLDDLGLAMGELTEENLRAIHFLVQELARIEVQINNAKTKALSSMNH--TPTEREIATLTAMGISVAEGGGAVVVGTPFGTDAF 265
            P+AFPPE W L+ QS+L ALGEKCR +C+G T RR +AA  VR++KPKLEE+     Q+GVAV+GG E +++ A+   Q GHW++  D  NAFN+ KR AI+ + A   P L  ++A+CY E     I+ MD+GERR +  ++G+ QGDG+GP LFC  + P + K + + + LGV L AY+DD+ L    +T EN++ I  LV EL  + + +N  K+ AL        P ER +  L   G+ +AE G   VVG P GTDA+
Sbjct:  445 PNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALHPPGRDVAPAERRL--LGDAGLPIAEEG-ITVVGVPIGTDAY 705          
BLAST of mRNA_H-paniculata_contig12826.1776.1 vs. uniprot
Match: A0A6H5KT19_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT19_9PHAE)

HSP 1 Score: 204 bits (520), Expect = 4.930e-61
Identity = 101/230 (43.91%), Postives = 145/230 (63.04%), Query Frame = 0
Query:    4 PDAFPPEIWELFLQSNLTALGEKCRSICLGSTMRRTLAAVVVRQYKPKLEEVNLSERQYGVAVSGGAELMSLRAKAHQQVGHWLISVDYINAFNSVKRAAILEEVAIHTPGLTPFVAKCYGEKLVDIIFQMDTGERRIMSSETGIHQGDGLGPALFCMPIRPFLCKCQEQLEALGVGLLAYLDDLGLAMGELTEENLRAIHFLVQELARIEVQINNAKTKALSSMNHTPT 233
            P+AFPPE W L+ QS+L ALGEKCR +C+G T RR +AA  VR++KPKLEE+     Q+GVAV+GG E +++ A+   Q GHW++  D  N  N+ KR AI+ + A   P L   +A+CY E     I+ MD+GERR +  ++G+ QGDG+GP LFC  + P + K + + + LGV L AY+DD+ L    +T E+++ I  LV EL  + + +N  K+ AL    H  T
Sbjct:  101 PNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVTGGVEQVAMDAQLVDQTGHWVVQTDCSNGLNTGKRTAIMAQAAKSVPDLVGCIARCY-ELPAKAIYAMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAESIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVT 329          
BLAST of mRNA_H-paniculata_contig12826.1776.1 vs. uniprot
Match: A0A6H5L4Y4_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Y4_9PHAE)

HSP 1 Score: 198 bits (504), Expect = 1.400e-59
Identity = 92/198 (46.46%), Postives = 133/198 (67.17%), Query Frame = 0
Query:    4 PDAFPPEIWELFLQSNLTALGEKCRSICLGSTMRRTLAAVVVRQYKPKLEEVNLSERQYGVAVSGGAELMSLRAKAHQQVGHWLISVDYINAFNSVKRAAILEEVAIHTPGLTPFVAKCYGEKLVDIIFQMDTGERRIMSSETGIHQGDGLGPALFCMPIRPFLCKCQEQLEALGVGLLAYLDDLGLAMGELTEENLR 201
            P+AFPPE W L+ +S+L ALGEKCR +C+G T RR +AA  VR++KPKLEE+     Q+GVAV+GG E +++ A+   Q GHW++  D  NAFN+ KR AI+ + A   P L  ++A+CY E     I+ MD+GERR +  ++G+ QGDG+GP LFC  + P + K + + + LGV L AY+DD+ L    +T EN++
Sbjct:   56 PNAFPPEFWTLWKRSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAENIQ 253          
BLAST of mRNA_H-paniculata_contig12826.1776.1 vs. uniprot
Match: A0A6H5KYJ9_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYJ9_9PHAE)

HSP 1 Score: 181 bits (458), Expect = 8.710e-49
Identity = 98/233 (42.06%), Postives = 141/233 (60.52%), Query Frame = 0
Query:   35 TMRRTLAAVVVRQYKPKLEEVNLSERQYGVAVSGGAELMSLRAKAHQQVGHWLISVDYINAFNSVKRAAILEEVAIHTPGLTPFVAKCYGEKLVDIIFQMDTGERRIMSSETGIHQGDGLGPALFCMPIRPFLCKCQEQLEALGVGLLAYLDDLGLAMGELTEENLRAIHFLVQELARIEVQINNAKTKALSSMNH--TPTEREIATLTAMGISVAEGGGAVVVGTPFGTDAF 265
            T RR +AA  VR++KPKLEE+     Q+G AV GG E +++ A+   Q GHW++  D  NAFN+ KR AI+ + A   P L  ++A+CY E     I+ MD+GERR +  ++G+ QGDG+GP LFC  + P + K + + + LGV L AY+DD+ L    +T EN++ I  +V EL  + + +N  K+ AL    H  TP ER +  L   G+ +AE G   VVG P GTDA+
Sbjct:    2 TWRRLIAAGTVREWKPKLEEIFREADQFGAAVVGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDVVDELEAVGIIVNRGKSSALPPPGHDVTPAERRL--LGDAGLPIAEEG-ITVVGVPIGTDAY 231          
BLAST of mRNA_H-paniculata_contig12826.1776.1 vs. uniprot
Match: A0A6H5KAK8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAK8_9PHAE)

HSP 1 Score: 179 bits (454), Expect = 5.400e-48
Identity = 92/210 (43.81%), Postives = 132/210 (62.86%), Query Frame = 0
Query:    4 PDAFPPEIWELFLQSNLTALGEKCRSICLGSTMRRTLAAVVVRQYKPKLEEVNLSERQYGVAVSGGAELMSLRAKAHQQVGHWLISVDYINAFNSVKRAAILEEVAIHTPGLTPFVAKCYGEKLVDIIFQMDTGERRIMSSETGIHQGDGLGPALFCMPIRPFLCK--------------CQEQLEALGV--GLLAYLDDLGLAMGELTE 197
            P+AFPPE W L+ QS+L ALGEKCR +C+G T RR +AA  VR++KPKLEE+     Q+GVAV+GG E +++ A+   Q GHW++  D  NAFN+ KR AI+ + A + P L  ++A+CY E     I+ MD+GERR +  ++G+ QGDG+GP LFC  + P + K               +E +  +GV  G  AY++D+  AM  +TE
Sbjct:  374 PNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKNVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKRLLGDAGLPIAEEGITIVGVPIGTDAYVEDI--AMKVITE 581          
BLAST of mRNA_H-paniculata_contig12826.1776.1 vs. uniprot
Match: A0A6H5KA96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA96_9PHAE)

HSP 1 Score: 176 bits (445), Expect = 1.380e-46
Identity = 81/175 (46.29%), Postives = 116/175 (66.29%), Query Frame = 0
Query:    4 PDAFPPEIWELFLQSNLTALGEKCRSICLGSTMRRTLAAVVVRQYKPKLEEVNLSERQYGVAVSGGAELMSLRAKAHQQVGHWLISVDYINAFNSVKRAAILEEVAIHTPGLTPFVAKCYGEKLVDIIFQMDTGERRIMSSETGIHQGDGLGPALFCMPIRPFLCKCQEQLEALG 178
            P+AFPPE W L+  S+L ALGEKCR +C+G T RR +AA  VR++KPKLEE+     Q+GVAV+GG E +++ A+   Q GHW++  D  NAFN+ KR AI+ + A   P L  ++A+CY E     I+ MD+GE R +  ++G+ QGDG+GP LFC  + P + K + + + LG
Sbjct:  431 PNAFPPEFWTLWKLSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYAMDSGEHRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLG 605          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12826.1776.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LL14_9PHAE1.960e-6645.28Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KKQ2_9PHAE5.680e-6644.57Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K0V7_9PHAE9.970e-6643.56Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KMQ2_9PHAE1.500e-6545.45Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JI32_9PHAE1.440e-6444.70Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KT19_9PHAE4.930e-6143.91Reverse transcriptase domain-containing protein (F... [more]
A0A6H5L4Y4_9PHAE1.400e-5946.46Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KYJ9_9PHAE8.710e-4942.06Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KAK8_9PHAE5.400e-4843.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KA96_9PHAE1.380e-4646.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 203..223
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 26..226
e-value: 2.0E-16
score: 60.2
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 1..247
score: 11.254

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig12826contigH-paniculata_contig12826:4993..5787 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig12826.1776.1mRNA_H-paniculata_contig12826.1776.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig12826 4993..5787 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig12826.1776.1 ID=prot_H-paniculata_contig12826.1776.1|Name=mRNA_H-paniculata_contig12826.1776.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=265bp
MEKPDAFPPEIWELFLQSNLTALGEKCRSICLGSTMRRTLAAVVVRQYKP
KLEEVNLSERQYGVAVSGGAELMSLRAKAHQQVGHWLISVDYINAFNSVK
RAAILEEVAIHTPGLTPFVAKCYGEKLVDIIFQMDTGERRIMSSETGIHQ
GDGLGPALFCMPIRPFLCKCQEQLEALGVGLLAYLDDLGLAMGELTEENL
RAIHFLVQELARIEVQINNAKTKALSSMNHTPTEREIATLTAMGISVAEG
GGAVVVGTPFGTDAF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom