prot_H-paniculata_contig12818.1773.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig12818.1773.1
Unique Nameprot_H-paniculata_contig12818.1773.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length73
Homology
BLAST of mRNA_H-paniculata_contig12818.1773.1 vs. uniprot
Match: D7FHD7_ECTSI (Indole-3-glycerol-phosphate synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHD7_ECTSI)

HSP 1 Score: 112 bits (280), Expect = 1.790e-28
Identity = 55/71 (77.46%), Postives = 62/71 (87.32%), Query Frame = 0
Query:    1 MRQAEAGEAAAPDTPEYPLSSVLRKRAGTLSIVAEYRRILKSGFIDGILAPELLCPLFRNGGASCVAIATE 71
            + QAEAG+ A  D PEYPLS VLRK  GTLS+VAEYR+ILKSGFIDGILAPELLCPL RNGGA+C+A+ATE
Sbjct:   36 LEQAEAGKGAG-DGPEYPLSDVLRKNKGTLSVVAEYRKILKSGFIDGILAPELLCPLLRNGGAACIAVATE 105          
BLAST of mRNA_H-paniculata_contig12818.1773.1 vs. uniprot
Match: A0A835YV94_9STRA (Indole-3-glycerol-phosphate synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV94_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 5.700e-14
Identity = 36/54 (66.67%), Postives = 44/54 (81.48%), Query Frame = 0
Query:   19 LSSVLRKRAGTLSIVAEYRRILKSGFIDGILAPELLCPLFRNGGASCVAIATEK 72
            ++ VLRK  GTLS+VAEYRR L+SGFI  IL PELL P+FR+GGAS VAIA ++
Sbjct:   99 VTPVLRKMPGTLSVVAEYRRNLRSGFIASILEPELLSPMFRDGGASAVAIALDR 152          
BLAST of mRNA_H-paniculata_contig12818.1773.1 vs. uniprot
Match: K0S3T1_THAOC (Indole-3-glycerol-phosphate synthase (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S3T1_THAOC)

HSP 1 Score: 60.8 bits (146), Expect = 3.970e-9
Identity = 29/55 (52.73%), Postives = 41/55 (74.55%), Query Frame = 0
Query:   19 LSSVLRKRAGTLSIVAEYRRILK-SGFIDGILAPELLCPLFRNGGASCVAIATEK 72
            L S+L KR GT+S+VAEY+R L+ SGF+  IL PE+L P+FR  GA+ VA+  ++
Sbjct:  104 LQSILTKRKGTISVVAEYKRKLEGSGFVTDILQPEILSPVFREFGAAAVAVLADE 158          
BLAST of mRNA_H-paniculata_contig12818.1773.1 vs. uniprot
Match: B8CAE6_THAPS (Indole-3-glycerol-phosphate synthase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CAE6_THAPS)

HSP 1 Score: 57.0 bits (136), Expect = 9.190e-8
Identity = 27/55 (49.09%), Postives = 40/55 (72.73%), Query Frame = 0
Query:   19 LSSVLRKRAGTLSIVAEYRRILK-SGFIDGILAPELLCPLFRNGGASCVAIATEK 72
            +  +L KR GT+SI+AEY+R L+ SGF+  IL PE+L P+FR  GA+ VA+  ++
Sbjct:  103 VQGLLTKRKGTISIIAEYKRKLEGSGFLSEILPPEILSPVFREFGATAVAVLADE 157          
BLAST of mRNA_H-paniculata_contig12818.1773.1 vs. uniprot
Match: A0A7S2JSA3_9STRA (Indole-3-glycerol-phosphate synthase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JSA3_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 3.930e-6
Identity = 23/57 (40.35%), Postives = 38/57 (66.67%), Query Frame = 0
Query:   18 PLSSVLRKRAGTLSIVAEYRRIL--KSGFIDGILAPELLCPLFRNGGASCVAIATEK 72
            P+ + L KR GT++I+AEY+R     + FI  IL  ++L P+FR GGA+ +A+  ++
Sbjct:   85 PVQAALTKRKGTITIIAEYKRKFDENAAFISEILPADILSPVFREGGATAIAVMADE 141          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12818.1773.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FHD7_ECTSI1.790e-2877.46Indole-3-glycerol-phosphate synthase n=2 Tax=Ectoc... [more]
A0A835YV94_9STRA5.700e-1466.67Indole-3-glycerol-phosphate synthase n=1 Tax=Tribo... [more]
K0S3T1_THAOC3.970e-952.73Indole-3-glycerol-phosphate synthase (Fragment) n=... [more]
B8CAE6_THAPS9.190e-849.09Indole-3-glycerol-phosphate synthase n=1 Tax=Thala... [more]
A0A7S2JSA3_9STRA3.930e-640.35Indole-3-glycerol-phosphate synthase n=1 Tax=Lepto... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig12818contigH-paniculata_contig12818:5581..7266 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig12818.1773.1mRNA_H-paniculata_contig12818.1773.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig12818 5566..7266 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig12818.1773.1 ID=prot_H-paniculata_contig12818.1773.1|Name=mRNA_H-paniculata_contig12818.1773.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=73bp
MRQAEAGEAAAPDTPEYPLSSVLRKRAGTLSIVAEYRRILKSGFIDGILA
PELLCPLFRNGGASCVAIATEK*
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