prot_H-paniculata_contig1281.1768.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1281.1768.1
Unique Nameprot_H-paniculata_contig1281.1768.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length393
Homology
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BLAST of mRNA_H-paniculata_contig1281.1768.1 vs. uniprot
Match: A0A6H5K8B2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8B2_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 2.430e-16
Identity = 51/81 (62.96%), Postives = 59/81 (72.84%), Query Frame = 0 
Query:    1 SGGRGLPVVELPSCPGRFVLKGTFGFVPRPHAARARHNVRTALGAFKILGGARGGGAWL-GAEAILEGDFEAMWRLLGQIH 80
            SGGRGLP+ E+PSCPGRFVLKGT G     +AARA+HNVR+AL AF  LGG   GG WL G  AILEGD EA W L+  ++
Sbjct:  487 SGGRGLPLSEIPSCPGRFVLKGTCG--APANAARAKHNVRSALSAFAALGGI--GGTWLRGETAILEGDHEATWGLIYDVY 563
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1281.1768.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K8B2_9PHAE2.430e-1662.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1281contigH-paniculata_contig1281:7502..9420 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1281.1768.1mRNA_H-paniculata_contig1281.1768.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1281 7502..9422 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1281.1768.1 ID=prot_H-paniculata_contig1281.1768.1|Name=mRNA_H-paniculata_contig1281.1768.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=393bp
SGGRGLPVVELPSCPGRFVLKGTFGFVPRPHAARARHNVRTALGAFKILG
GARGGGAWLGAEAILEGDFEAMWRLLGQIHTAFGRPRATRRHREISIDRN
RHPMRSSRSVKPPPPDNSLLAMSTDVLKNADGAAAGAKVVEGKRRQDDTN
KKAMSRDVFNVFAAVASSSKTKGKCIQRQNVPPPIPPPSPSPPPVDAVER
YEDVHHLAVSLGSKKDNINRGANRVNSVALGSFRTETIGSSSTMFSRSIA
DHDTRNIPCRRPGSPRVAPTATDGGNGGGSIHASPRGGSSTHPIAGIVRE
RAASIATAGVGRPTSTTGTDRKRLTRSPSGSSVSRGQQQPPPQPCELSAT
DKPAALSWRRSFCSAAKNVVFSCPAATAQAVDSSSGMVRHVLP
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