prot_H-paniculata_contig128.1761.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig128.1761.1
Unique Nameprot_H-paniculata_contig128.1761.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length680
Homology
BLAST of mRNA_H-paniculata_contig128.1761.1 vs. uniprot
Match: D7FTS4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTS4_ECTSI)

HSP 1 Score: 323 bits (827), Expect = 3.610e-98
Identity = 260/646 (40.25%), Postives = 343/646 (53.10%), Query Frame = 0
Query:   71 SRPFRIITESAVTSSEKDPLIQDLFTSSSPVDGEKDSGNSNFIGKAEPV--LTLIGFEVVSRLRHFLVVARESWAIRSTVTSGGSIAQVLTSSRGAAKRYIAGIHEATSGQLRNQN-------NAQIEIMVDLANELLLDRAVKQTFFSTGNIFFEITRWLEQEGEE------------DIVSENSG-DALRLLVKDMRWFSAAAAVLNSAFFHSIEVPERIDLVARPIPVSIPRVSELLVDVYFSLRRRLAQFGHDNRGCAEEEKCNNISSHGLTPAGFGGRNGGXXXXXXXXXMAAKTANTDDLEKLSTSMGDWLVGALNGMGEAVRLFNLENERKGLVRNLVSVTIGQYYRSRSQPAASDASGLLMTLTERTAGLIEHLNRVEQTR--LQELEILRRQREKDSPPATPKPPFRKVDRKRGKRSSFFGLRPLSPAT--SVTPPGSPS----EPPAAQSTVGHNGPPKQRLAFHADRGLRSASSMGHTLTKEGSLQKVDLPQPKNCVNSLSGNDTGGFGTNSHHGELDNSNEDETQRQKGL--RRDGTASLLSAP-----------TSMPRALLLNTPVLLYSYSKLLHALVCGSYDLRAAFVVKCEAELRNIGRDGGYLDLLAMLDGGAPRMVFRESARFLHEI 673
            SRPFRI      T+++K      L    S V    D G       A+    + L+GFE + RLRHFLVVA ESWAIR+ V  G    ++L+ +  AA+RY+AG+ E  +G LR+Q        +AQ+E+M DLA+E++LD  VK+ FFSTG+IFFEI+R LE                 +I   + G D  R +V D R  SA AAVL++AFFHSI++P+RIDLV RP P+S+P V+E LV VY +L RR+     D    ++ +        G +PAG                  A+ A +  L+ LST + D +V ALNG+ + V LFN+E+E  G+VRNLV V +G   R   QPAASDA   ++ + +R   LIE L+R EQ R  L+E  +L         P +  P   K   K  KRS F  L  LSP    SVTPP SP     EPP     +  N     R  +  + G  SAS      T    + K    Q K+ V++ SG   GG                      GL  RR G  S+ S P            S PR  L + PVLL+SY+KLL+ALVCGSY+LR AF   CE ++RNIGR+GGYLD+L+ LDGGAPR+VFR++A FLHEI
Sbjct:    3 SRPFRI------TAAKK------LAHCESAVGSAADKGPETSASGADEHRHILLVGFEDICRLRHFLVVACESWAIRNGV--GTRAKELLSCAPVAAQRYLAGVLEVMTGPLRDQVLQTEGTVDAQVELMQDLADEMILDAVVKEAFFSTGDIFFEISRRLEAAAATVAAGSAVNTAAGEIAFRHDGFDGRRAVVSDARLISATAAVLDAAFFHSIQIPQRIDLVGRPKPMSLPAVAEHLVFVYCALCRRIVTNCEDGADNSDIDTGGRNDLKGFSPAGV--------------ERLAEDAMSP-LDALSTGVLDRVVRALNGISDVVSLFNIEHEHLGIVRNLVGVGLGVKVRVGIQPAASDALAFVVRVNDRAVDLIEDLDRREQERRQLEEARLLA------LGPVSVSPTSEKNKGK--KRSVFARLGSLSPRPRRSVTPPLSPPSPAVEPPVGLPPINDNS--DVRTNYILEGGSGSASKT----TARAGVPK----QEKSDVDNASGGLLGGL--------------------VGLEGRRGGGNSVGSPPPPSATQCFESQVSSPRGFLSSAPVLLHSYAKLLNALVCGSYNLREAFFSSCEVDIRNIGREGGYLDVLSRLDGGAPRLVFRQTALFLHEI 581          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig128.1761.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FTS4_ECTSI3.610e-9840.25Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..679
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..12

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig128contigH-paniculata_contig128:39696..42813 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig128.1761.1mRNA_H-paniculata_contig128.1761.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig128 39696..42813 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig128.1761.1 ID=prot_H-paniculata_contig128.1761.1|Name=mRNA_H-paniculata_contig128.1761.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=680bp
PCIAALSSWSLFMVPLRAPWSVGGFIADFRSKQHSAAKIIEVPLSSMLEV
GVVSARENLNTFASDEANNWSRPFRIITESAVTSSEKDPLIQDLFTSSSP
VDGEKDSGNSNFIGKAEPVLTLIGFEVVSRLRHFLVVARESWAIRSTVTS
GGSIAQVLTSSRGAAKRYIAGIHEATSGQLRNQNNAQIEIMVDLANELLL
DRAVKQTFFSTGNIFFEITRWLEQEGEEDIVSENSGDALRLLVKDMRWFS
AAAAVLNSAFFHSIEVPERIDLVARPIPVSIPRVSELLVDVYFSLRRRLA
QFGHDNRGCAEEEKCNNISSHGLTPAGFGGRNGGSGGDEGRVGMAAKTAN
TDDLEKLSTSMGDWLVGALNGMGEAVRLFNLENERKGLVRNLVSVTIGQY
YRSRSQPAASDASGLLMTLTERTAGLIEHLNRVEQTRLQELEILRRQREK
DSPPATPKPPFRKVDRKRGKRSSFFGLRPLSPATSVTPPGSPSEPPAAQS
TVGHNGPPKQRLAFHADRGLRSASSMGHTLTKEGSLQKVDLPQPKNCVNS
LSGNDTGGFGTNSHHGELDNSNEDETQRQKGLRRDGTASLLSAPTSMPRA
LLLNTPVLLYSYSKLLHALVCGSYDLRAAFVVKCEAELRNIGRDGGYLDL
LAMLDGGAPRMVFRESARFLHEICIECEM*
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