prot_H-paniculata_contig12770.1742.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig12770.1742.1
Unique Nameprot_H-paniculata_contig12770.1742.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length189
Homology
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BLAST of mRNA_H-paniculata_contig12770.1742.1 vs. uniprot
Match: D7G847_ECTSI (NTP_transf_2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G847_ECTSI)

HSP 1 Score: 229 bits (585), Expect = 2.750e-66
Identity = 113/146 (77.40%), Postives = 130/146 (89.04%), Query Frame = 0 
Query:   43 PPAQHSIGISADLFHMKHMEIALSQEEVERADLSGMTPGEVLVRFLEFFGRQFDPSRLGISVGRGALNNPFPLAPAVDPRTGMPVMDAHVVIEDPLKMDQNVSRSCFAFREVQCLFANCLSVLQLRGAEMAESDPDADLLQMLLYY 188
            P AQ+++G++A+LF+MKHMEI LSQEEV+RADLSGMTPGEVLVRFL FFGRQFDP+R+GISVGRGA++NPF L P+VDPRTGMPVM+AHVVIEDPL  DQNV+RSCF F +VQ LF   LSVLQ RGA+MAE D DADLLQMLLYY
Sbjct: 1947 PQAQYNLGMNAELFNMKHMEINLSQEEVDRADLSGMTPGEVLVRFLAFFGRQFDPTRVGISVGRGAISNPFALTPSVDPRTGMPVMEAHVVIEDPLDRDQNVARSCFGFPQVQWLFGQYLSVLQERGADMAEFDRDADLLQMLLYY 2092
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BLAST of mRNA_H-paniculata_contig12770.1742.1 vs. uniprot
Match: A0A835Z4K4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4K4_9STRA)

HSP 1 Score: 119 bits (297), Expect = 1.350e-27
Identity = 71/159 (44.65%), Postives = 92/159 (57.86%), Query Frame = 0 
Query:   38 TQAMGPPAQHSIGISADLFHMKHMEIALSQEEVERADLSGMTPGEVLVRFLEFFGRQFDPSRLGISVGRGALNNPFPLAPAVDPRTGMPVMDAHVVIEDPLKMDQN--------VSRSCFAFREVQCLFANCLSVLQLRGAEMAESDPDADLLQMLLYY 188
            T A    A + +G   D F +   +  +++ E+E  DLS MTPG  L++FL F+ R FDP   GISVGRG L +PFPL   VD  TG+    A + IEDPL M +N        VS SCF F EVQ LF+ CL+ L++RG E    +PD +LLQ L  Y
Sbjct: 1800 TMAAAVAAANHLGPPRDAFPLDPPD--MTEAELEAEDLSDMTPGACLLKFLAFYSRAFDPLSYGISVGRGRLGSPFPLDLPVDAATGLRAAAA-LTIEDPLDMQRNDPSATIRNVSHSCFRFPEVQWLFSQCLAELEVRGPEKLRRNPDTNLLQDLCQY 1955
[Close]
BLAST of mRNA_H-paniculata_contig12770.1742.1 vs. uniprot
Match: A0A1V9Z488_9STRA (PAP-associated domain-containing protein 5-like n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z488_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 2.200e-5
Identity = 33/85 (38.82%), Postives = 49/85 (57.65%), Query Frame = 0 
Query:   81 GEVLVRFLEFFGRQFDPSRLGISVGRGALNNPFPLAPAVDPR--TGMPVMDAHVVIEDPLKMDQNVSRSCFAFREVQCLFANCLS 163
            GE+ + FL  FG  FDP+   +S  R   + PF    A+D R  +G   +   VVIEDPL+ + NV+++CF F +VQ  F + L+
Sbjct:  662 GELFLHFLHLFGCDFDPA---VSFVRSTHDGPFG---ALDDRGFSGCKSLGDVVVIEDPLRPEHNVAKTCFGFAQVQSTFRDALT 740
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12770.1742.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G847_ECTSI2.750e-6677.40NTP_transf_2 domain-containing protein n=2 Tax=Ect... [more]
A0A835Z4K4_9STRA1.350e-2744.65Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A1V9Z488_9STRA2.200e-538.82PAP-associated domain-containing protein 5-like n=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.1410.10coord: 23..187
e-value: 4.4E-15
score: 57.7
NoneNo IPR availablePANTHERPTHR23092POLY(A) RNA POLYMERASEcoord: 37..171
NoneNo IPR availableSUPERFAMILY81631PAP/OAS1 substrate-binding domaincoord: 66..165

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig12770contigH-paniculata_contig12770:2444..4284 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig12770.1742.1mRNA_H-paniculata_contig12770.1742.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig12770 2041..4311 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig12770.1742.1 ID=prot_H-paniculata_contig12770.1742.1|Name=mRNA_H-paniculata_contig12770.1742.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=189bp
MVVSCTAGVQEALRVVGRAGFGPHLQQQQQQQQVLQVTQAMGPPAQHSIG
ISADLFHMKHMEIALSQEEVERADLSGMTPGEVLVRFLEFFGRQFDPSRL
GISVGRGALNNPFPLAPAVDPRTGMPVMDAHVVIEDPLKMDQNVSRSCFA
FREVQCLFANCLSVLQLRGAEMAESDPDADLLQMLLYY*
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