prot_H-paniculata_contig12654.1660.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig12654.1660.1
Unique Nameprot_H-paniculata_contig12654.1660.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length270
Homology
BLAST of mRNA_H-paniculata_contig12654.1660.1 vs. uniprot
Match: D8LJB4_ECTSI (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJB4_ECTSI)

HSP 1 Score: 462 bits (1188), Expect = 5.630e-157
Identity = 222/263 (84.41%), Postives = 237/263 (90.11%), Query Frame = 0
Query:    8 VERVPGLYWALLNSADAMDANDITGVRGPKQSCFVDIEKDLQRTLGMTDVTAMRNVLRCTSTFVPDVGYVQGMNFVCRCLLQVYHDEEEAFWVFVGMLQRFGLRRLYCPGMPLLRLRFFQLNRLLMWHLPGLYDHFEACGVTADLFATSWFVTLLSDGGMLPDREVKVMWDRIFLHASSPASQWSSIFLVLLELLRRAEGTLKKESRFSELIQRLVNMPFRDLCEGRGACGMMEEAGRRFETSSPMPVQLLLLRDQWMEGGDE 270
            +ERVPGLY ALL SADAMDAND+TGVRGPKQSCFVDIEKDLQRTLGMTDV+ +RNVLRCTSTFVPDVGYVQGMNFVCR +LQV+ DEEEAFWVFVGMLQRF LR LYCPGMPLLRLRFFQLNRLLMWHLP LYDHFEACGV  +L+ATSWFVTLLSDGGMLPD EVKV+WD IFLH+SSPASQW+ +FL LLELLRRA   LK+ESRFSELIQRLVNMPFR+LC G GAC  +EE  RRFETSSPMPVQLLLL DQW EGG E
Sbjct:  418 IERVPGLYSALLMSADAMDANDMTGVRGPKQSCFVDIEKDLQRTLGMTDVSPLRNVLRCTSTFVPDVGYVQGMNFVCRSVLQVFQDEEEAFWVFVGMLQRFRLRELYCPGMPLLRLRFFQLNRLLMWHLPELYDHFEACGVQTNLYATSWFVTLLSDGGMLPDSEVKVVWDHIFLHSSSPASQWAPMFLFLLELLRRASPALKEESRFSELIQRLVNMPFRELCRGSGACSTIEEGRRRFETSSPMPVQLLLLNDQWTEGGGE 680          
BLAST of mRNA_H-paniculata_contig12654.1660.1 vs. uniprot
Match: A0A6H5JIN0_9PHAE (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIN0_9PHAE)

HSP 1 Score: 463 bits (1191), Expect = 1.260e-154
Identity = 223/263 (84.79%), Postives = 237/263 (90.11%), Query Frame = 0
Query:    8 VERVPGLYWALLNSADAMDANDITGVRGPKQSCFVDIEKDLQRTLGMTDVTAMRNVLRCTSTFVPDVGYVQGMNFVCRCLLQVYHDEEEAFWVFVGMLQRFGLRRLYCPGMPLLRLRFFQLNRLLMWHLPGLYDHFEACGVTADLFATSWFVTLLSDGGMLPDREVKVMWDRIFLHASSPASQWSSIFLVLLELLRRAEGTLKKESRFSELIQRLVNMPFRDLCEGRGACGMMEEAGRRFETSSPMPVQLLLLRDQWMEGGDE 270
            +ERVPGLY ALL SADAMDANDITGVRGPKQSCFVDIEKDLQRTLGMTDV+ +RNVLRCTSTFVPDVGYVQGMNFVCR +LQV+ DEEEAFWVFVGMLQRF LR LYCPGMPLLRLRFFQLNRLLMWHLP LYDHFEACGV  +L+ATSWFVTLLSDGGMLPD EVKV+WD IFLH+SSPASQW+ +FL LLELLRRA   LK+ESRFSELIQRLVNMPFR+LC G GAC  +EE  RRFETSSPMPVQLLLL DQW EGG E
Sbjct:  648 IERVPGLYSALLMSADAMDANDITGVRGPKQSCFVDIEKDLQRTLGMTDVSPLRNVLRCTSTFVPDVGYVQGMNFVCRSVLQVFQDEEEAFWVFVGMLQRFRLRELYCPGMPLLRLRFFQLNRLLMWHLPELYDHFEACGVQTNLYATSWFVTLLSDGGMLPDSEVKVVWDHIFLHSSSPASQWAPMFLFLLELLRRASPALKEESRFSELIQRLVNMPFRELCRGSGACSTIEEGRRRFETSSPMPVQLLLLHDQWTEGGGE 910          
BLAST of mRNA_H-paniculata_contig12654.1660.1 vs. uniprot
Match: A0A835ZLD6_9STRA (Rab-GTPase-TBC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLD6_9STRA)

HSP 1 Score: 281 bits (720), Expect = 1.030e-88
Identity = 141/260 (54.23%), Postives = 177/260 (68.08%), Query Frame = 0
Query:    8 VERVPGLYWALLNSADAMDANDITGVRGPKQSCFVDIEKDLQRTLGMTDVTAMRNVLRCTSTFVPD-VGYVQGMNFVCRCLLQVYH-DEEEAFWVFVGMLQRFGLRRLYCPGMPLLRLRFFQLNRLLMWHLPGLYDHFEACGVTADLFATSWFVTLLSDGGMLPDREVKVMWDRIFLHASSPASQWSSIFLVLLELLRRAEGTLKKESRFSELIQRLVNMPFRDLC-EGRGACGMMEEAGRRFETSSPMPVQLLLLRDQW 264
            VERVPGLY AL  SA A  A D+ G RG    C  DIEKD+ RT    +  A+R VL   S F+P  +GYVQG N V R LL V   D+E+ FW +VGM+ +F L  LY PGMP LRLRFFQLNRL++WHLP L+ HF  C V ADL+AT WF+TLL+DG MLP+++ +V+WDRIF+   +PA QWS I+ VLLELLRRAE  L   +RF +LIQ L ++P +DL   G GA  ++E A   FE S P+P QLL++ D+W
Sbjct:  232 VERVPGLYEALFASAQATSAADMAGGRGAMSQCVTDIEKDISRTANFENRMALRGVLYSLSAFLPGGIGYVQGQNLVARFLLIVMREDQEDTFWAWVGMMHQFDLLGLYTPGMPRLRLRFFQLNRLVLWHLPRLHAHFATCDVAADLYATPWFITLLADGSMLPEQQTRVIWDRIFMQCGAPAEQWSCIYGVLLELLRRAEPMLLGLARFDDLIQMLTHLPIKDLLFPGEGAVALLERAASAFEASVPLPCQLLMIEDEW 491          
BLAST of mRNA_H-paniculata_contig12654.1660.1 vs. uniprot
Match: A0A7S1UJ21_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJ21_9STRA)

HSP 1 Score: 164 bits (415), Expect = 2.310e-42
Identity = 95/267 (35.58%), Postives = 147/267 (55.06%), Query Frame = 0
Query:   10 RVPGLYWALLNSADA---------MDANDITGVRGPKQSCFVDIEKDLQRTL--GMTDVTAMRNVLRCTSTFVPDVGYVQGMNFVCRCLLQVYH-DEEEAFWVFVGMLQRFGLRRLYCPGMPLLRLRFFQLNRLLMWHLPGLYDHFEACGVTADLFATSWFVTLLSDGGMLPDREVKVMWDRIFLHASSPASQWSSIFLVLLELLRRAEGTLKKESRFSELIQRLVNMPFRDLCEGRGACGMMEEAGRRFETSSPMPVQLLLLRDQW 264
            RVPGLY ALL++ +A          +   + GV     + + +I+ D+ RT+  G      +R++LR T+ F P +GY QG+N+V + +L     D+E AFW+    L RF + +LY PGM  + L +FQL +L+  HLPGL  H +   VT DL++TSWFVTLL+D  +LP   V  +WD +F++  +P+ QW  IF V+L  L  +EG L K S F   +  L ++PF  + +       + +   ++E       QL LL  ++
Sbjct:  374 RVPGLYEALLSTIEAEVMGAIKSDFEETKMGGVYA--STVWTEIDTDVCRTVETGTAMARRLRDILRATAAFFPSLGYCQGLNYVGKFILTCCGGDDEGAFWLMAAALTRFEITKLYEPGMTRVHLCYFQLEKLVQLHLPGLAKHLKMFDVTPDLYSTSWFVTLLTDNALLPGAGVGQVWDALFVYDGAPSEQWGLIFRVILWALSLSEGELLKLSTFEHCLSFLHHLPFDGMWDSIDDFSTLMDPHPQWEAHRSFAEQLTLLHAEF 638          
BLAST of mRNA_H-paniculata_contig12654.1660.1 vs. uniprot
Match: A0A7S4DB79_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DB79_HETAK)

HSP 1 Score: 126 bits (316), Expect = 4.620e-32
Identity = 69/181 (38.12%), Postives = 97/181 (53.59%), Query Frame = 0
Query:   95 EEAFWVFVGMLQRFGLRRLYCPGMPLLRLRFFQLNRLLMWHLPGLYDHFEACGVTADLFATSWFVTLLSDGGMLPDREVKVMWDRIFLH--ASSPASQWSSIFLVLLELLRRAEGTLKK--ESRFSELIQRLVNMPFRDLC-EGRGACGMMEEAGRRFETSSPMPVQLLLLRDQWMEGGDE 270
            E++FW    +L    +  LY  GMP L LRFFQL RL  WHLP L D   +  + A+L+AT WFVTLL+D  + P+ EV  +WD  F+   A  P ++W+  F  LL  LR     L +     F   +  L  +PFRD+C + RG  G+  +A   +E  + M  QL LL  +W+   D+
Sbjct:   18 EDSFWALSALLSPTDMTGLYREGMPGLHLRFFQLERLQQWHLPELADRLRSLQIPANLYATGWFVTLLTDASLFPEPEVTKLWDAFFIRWAAGGPRARWALHFRALLGALRALWPRLARLPAGDFDAALALLHRVPFRDICKDSRGVLGLAADAFELYERETKMEDQLALLELEWVRQQDD 198          
BLAST of mRNA_H-paniculata_contig12654.1660.1 vs. uniprot
Match: A0A7S2PZU8_9DINO (Hypothetical protein n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2PZU8_9DINO)

HSP 1 Score: 111 bits (277), Expect = 7.530e-26
Identity = 75/204 (36.76%), Postives = 105/204 (51.47%), Query Frame = 0
Query:   34 RGPKQSCFVDIEKDLQRTLGM----TDVTAMR-----NVLRCTSTFVPDVGYVQGMNFVCRCLLQVYHDEEEAFWVFVGMLQRFGLRRLYCPGMPLLRLRFFQLNRLLMWHLPGLYDHFEACGVTADLFATSWFVTLLSDGGMLPDREVKVMWDRIFLHASSPASQWSSIFLVLLELLRRAEGTLKKESRFSELIQRLVNMPFR 228
            R  +  C  +I KD+ RT        D T +      NVLR  S F P+VGY QGM F+C  LL +Y  EE+AF + + +L  + + +L+ PG+PLL   FFQL RLL  H+P L +H    GV   ++A+ WF+T+       P   V  +WD IFL     A     IF + L LL   +  L  ES F ++++ L   P R
Sbjct:   13 RTEEAPCEAEIVKDINRTFPKHVLYRDKTGLGQQQLLNVLRAYSVFNPEVGYCQGMGFICGVLL-MYMCEEDAFLMLISLLDNYRMSKLFMPGLPLLNKYFFQLQRLLAMHMPSLCNHLAQQGVEPTMYASKWFMTVCIYN--FPFSTVVRIWD-IFL-----AEGVKIIFRIALALLMMNQEALLNES-FEQILETLKQAPSR 206          
BLAST of mRNA_H-paniculata_contig12654.1660.1 vs. uniprot
Match: A0A813HJZ4_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813HJZ4_POLGL)

HSP 1 Score: 108 bits (270), Expect = 4.210e-24
Identity = 73/199 (36.68%), Postives = 103/199 (51.76%), Query Frame = 0
Query:   40 CFVDIEKDLQRT------------LGMTDVTAMRNVLRCTSTFVPDVGYVQGMNFVCRCLLQVYHDEEEAFWVFVGMLQRFGLRRLYCPGMPLLRLRFFQLNRLLMWHLPGLYDHFEACGVTADLFATSWFVTLLSDGGMLPDREVKVMWDRIFLHASSPASQWSSIFLVLLELLRRAEGTLKKESRFSELIQRLVNMP 226
            C  DI +D+ RT            LG   +    NVLR  S F P+VGY QGM F+C  LL +Y  E++AF + + +L+ + +  L+ P +PLL   FFQL RLL  H+P LY+H    GV   ++A+ WF+T+       P   V  +WD IFL     A     IF + L LL+  +  L  ES F +++Q L   P
Sbjct:  104 CEGDIVRDINRTFPKHVLFRDKQGLGQQQLL---NVLRAYSVFNPEVGYCQGMGFICGVLL-MYMCEDDAFLMLISLLENYRMAGLFMPNLPLLNKYFFQLQRLLEMHMPQLYNHLAEQGVEPTMYASQWFMTVCIYN--FPFATVVRVWD-IFL-----AEGVKIIFRIALALLKLNQEALLNES-FEQILQTLKQAP 289          
BLAST of mRNA_H-paniculata_contig12654.1660.1 vs. uniprot
Match: A0A7S2JBH9_9DINO (Hypothetical protein n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2JBH9_9DINO)

HSP 1 Score: 103 bits (257), Expect = 2.240e-23
Identity = 64/167 (38.32%), Postives = 91/167 (54.49%), Query Frame = 0
Query:   62 NVLRCTSTFVPDVGYVQGMNFVCRCLLQVYHDEEEAFWVFVGMLQRFGLRRLYCPGMPLLRLRFFQLNRLLMWHLPGLYDHFEACGVTADLFATSWFVTLLSDGGMLPDREVKVMWDRIFLHASSPASQWSSIFLVLLELLRRAEGTLKKESRFSELIQRLVNMPFR 228
            NVLR  S F  +VGY QGM F+C  LL +Y  E++AF + + +L+ + +  L+ P +PLL   FFQL RLL  H+P LY H    GV   ++A+ WF+T+       P   V  +WD IFL     A     IF + L LL+  +  L  +S F +++Q L   P R
Sbjct:    6 NVLRAYSVFNAEVGYCQGMGFICGVLL-MYMGEDDAFLMLISLLENYRMAGLFMPNLPLLNKYFFQLQRLLEMHMPLLYSHLAQQGVEPTMYASEWFMTVCIYN--FPFSTVVRVWD-IFL-----AEGVKIIFRIALALLKLNQEALLSQS-FEQILQTLKQAPSR 162          
BLAST of mRNA_H-paniculata_contig12654.1660.1 vs. uniprot
Match: A0A812TBV2_9DINO (EVI5 protein n=6 Tax=Symbiodinium TaxID=2949 RepID=A0A812TBV2_9DINO)

HSP 1 Score: 103 bits (258), Expect = 2.210e-22
Identity = 72/205 (35.12%), Postives = 103/205 (50.24%), Query Frame = 0
Query:   34 RGPKQSCFVDIEKDLQRT------------LGMTDVTAMRNVLRCTSTFVPDVGYVQGMNFVCRCLLQVYHDEEEAFWVFVGMLQRFGLRRLYCPGMPLLRLRFFQLNRLLMWHLPGLYDHFEACGVTADLFATSWFVTLLSDGGMLPDREVKVMWDRIFLHASSPASQWSSIFLVLLELLRRAEGTLKKESRFSELIQRLVNMP 226
            R     C  DI +D+ RT            LG   +    NVLR  S F  +VGY QGM F+C  LL +Y  E++AF + + +L+ + +  L+ P +PLL   FFQL RLL  +LP LY+H    GV   ++A+ WF+T+       P   V  +WD IFL     A     IF + L LL+  +  L  +S F +++Q L   P
Sbjct:   99 RAEAAPCEGDIVRDINRTFPKHVLYRDKQGLGQQQLL---NVLRAYSVFNAEVGYCQGMGFICGVLL-MYMGEDDAFLMLISLLENYRMAGLFMPNLPLLNKYFFQLQRLLEMNLPQLYEHLAEQGVEPTMYASQWFMTVCIYN--FPFSTVVRVWD-IFL-----AEGVKIIFRIALALLKLNQDALLHQS-FEQILQTLKQAP 290          
BLAST of mRNA_H-paniculata_contig12654.1660.1 vs. uniprot
Match: A0A7S1ALD3_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1ALD3_NOCSC)

HSP 1 Score: 104 bits (259), Expect = 2.240e-22
Identity = 73/201 (36.32%), Postives = 103/201 (51.24%), Query Frame = 0
Query:   40 CFVDIEKDLQRT------------LGMTDVTAMRNVLRCTSTFVPDVGYVQGMNFVCRCLLQVYHDEEEAFWVFVGMLQRFGLRRLYCPGMPLLRLRFFQLNRLLMWHLPGLYDHFEACGVTADLFATSWFVTLLSDGGMLPDREVKVMWDRIFLHASSPASQWSSIFLVLLELLRRAEGTLKKESRFSELIQRLVNMPFR 228
            C  DI +D+ RT            LG   + +   VLR  S F P+VGY QGM FVC  LL +Y  E++AF + + +L+ + +  L+ P +PLL   FFQL RLL  H+P L+ H    GV   ++A+ WF+T+       P   V  +WD IFL     A     IF + L LL+  +  L  ES F +++Q L   P R
Sbjct:  128 CEGDIVRDINRTFPKHVLYRDKAGLGQQQLLS---VLRAYSVFNPEVGYCQGMGFVCGVLL-MYMREDDAFLMLISLLENYRMAGLFMPNLPLLNKYFFQLQRLLEIHMPLLFSHLGQQGVEPTMYASQWFMTVCIYN--FPFSTVVRVWD-IFL-----AEGVKIIFRIALALLKLNQDALINES-FEQILQTLKQAPSR 315          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12654.1660.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJB4_ECTSI5.630e-15784.41Rab-GAP TBC domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5JIN0_9PHAE1.260e-15484.79Rab-GAP TBC domain-containing protein n=1 Tax=Ecto... [more]
A0A835ZLD6_9STRA1.030e-8854.23Rab-GTPase-TBC domain-containing protein n=1 Tax=T... [more]
A0A7S1UJ21_9STRA2.310e-4235.58Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S4DB79_HETAK4.620e-3238.12Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2PZU8_9DINO7.530e-2636.76Hypothetical protein n=1 Tax=Brandtodinium nutricu... [more]
A0A813HJZ4_POLGL4.210e-2436.68Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
A0A7S2JBH9_9DINO2.240e-2338.32Hypothetical protein n=1 Tax=Alexandrium andersoni... [more]
A0A812TBV2_9DINO2.210e-2235.12EVI5 protein n=6 Tax=Symbiodinium TaxID=2949 RepID... [more]
A0A7S1ALD3_NOCSC2.240e-2236.32Hypothetical protein n=1 Tax=Noctiluca scintillans... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000195Rab-GTPase-TBC domainSMARTSM00164tbc_4coord: 3..207
e-value: 4.4E-12
score: 56.1
IPR000195Rab-GTPase-TBC domainPFAMPF00566RabGAP-TBCcoord: 39..202
e-value: 2.0E-36
score: 125.7
IPR000195Rab-GTPase-TBC domainPROSITEPS50086TBC_RABGAPcoord: 6..184
score: 20.805
NoneNo IPR availableGENE3D1.10.472.80coord: 112..244
e-value: 2.6E-20
score: 74.6
NoneNo IPR availableGENE3D1.10.8.270coord: 23..111
e-value: 3.5E-15
score: 57.7
NoneNo IPR availablePANTHERPTHR22957TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEINcoord: 40..205
IPR035969Rab-GTPase-TBC domain superfamilySUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 37..142
IPR035969Rab-GTPase-TBC domain superfamilySUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 117..228

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig12654contigH-paniculata_contig12654:697..6959 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig12654.1660.1mRNA_H-paniculata_contig12654.1660.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig12654 697..6959 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig12654.1660.1 ID=prot_H-paniculata_contig12654.1660.1|Name=mRNA_H-paniculata_contig12654.1660.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=270bp
MHFRFPAVERVPGLYWALLNSADAMDANDITGVRGPKQSCFVDIEKDLQR
TLGMTDVTAMRNVLRCTSTFVPDVGYVQGMNFVCRCLLQVYHDEEEAFWV
FVGMLQRFGLRRLYCPGMPLLRLRFFQLNRLLMWHLPGLYDHFEACGVTA
DLFATSWFVTLLSDGGMLPDREVKVMWDRIFLHASSPASQWSSIFLVLLE
LLRRAEGTLKKESRFSELIQRLVNMPFRDLCEGRGACGMMEEAGRRFETS
SPMPVQLLLLRDQWMEGGDE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000195Rab-GTPase-TBC_dom
IPR035969Rab-GTPase_TBC_sf