prot_H-paniculata_contig12550.1604.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig12550.1604.1
Unique Nameprot_H-paniculata_contig12550.1604.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length219
Homology
BLAST of mRNA_H-paniculata_contig12550.1604.1 vs. uniprot
Match: A0A6H5L663_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L663_9PHAE)

HSP 1 Score: 178 bits (451), Expect = 1.840e-51
Identity = 92/194 (47.42%), Postives = 136/194 (70.10%), Query Frame = 0
Query:   25 GCAFWRDMVRGVVRITQRTFIDTVIKRFGVETESDLPASQQANLGPRREDEELSNKPMRSAVGSLIWLSGMTKPDIANAGLNLSVYVDADYAHRSNWRRSVSVVAEMLGGSVVSDTSTTQHYVTLSTSEAEYVAMAQGAKTALLTRAVLEFLQPQLSGRKVMMFEDNQGAMATSKNPTSTGRSKHINVRYHFIQ 218
            GCA  RD   G +RI+   +ID+++KRF V++ S +PAS   +LGP+R+D +    P++ A+GS++W+S  ++PD++ A + L+VYVDA YA   + +RSVS  A  +G +VVS  S TQ  ++LS++EAEY+A  +G K ALL RAVL F  P+ SG  + + EDNQGA+A  +NP S+GR+KHINVR+H I+
Sbjct:  106 GCAIERDFEAGTLRISHAAYIDSMVKRFDVQSASRIPASPGVDLGPKRDDMKGGEWPVKEAIGSMMWVSTFSRPDVSLA-VRLAVYVDASYADTED-KRSVSGFATTVGKTVVSHGSKTQSNLSLSSTEAEYIAAGEGVKEALLVRAVLSFAAPETSGSSIQVLEDNQGAIALVQNPLSSGRTKHINVRFHLIR 297          
BLAST of mRNA_H-paniculata_contig12550.1604.1 vs. uniprot
Match: A0A6H5L175_9PHAE (Uncharacterized protein n=9 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L175_9PHAE)

HSP 1 Score: 184 bits (468), Expect = 4.400e-50
Identity = 102/237 (43.04%), Postives = 139/237 (58.65%), Query Frame = 0
Query:   23 YLGCAFWRDMVRGVVRITQRTFIDTVIKRFGVETESDLPASQQANLGPRREDEELSNKPMRSAVGSLIWLSGMTKPDIANA----------------------------------------GLNLSVYVDADYAHRSNWRRSVSVVAEMLGGSVVSDTSTTQHYVTLSTSEAEYVAMAQGAKTALLTRAVLEFLQPQLSGRKVMMFEDNQGAMATSKNPTSTGRSKHINVRYHFIQE 219
            Y GCA  RD+  G   ++Q+ +I  ++ RFG+ T +  PA   A+LGP+R+DE   +KP+R A+G L+W +  T+PDIA A                                        GL+L VYVDA YA R   RRSV+ +A  +GG+VVS  S TQ  V+LSTSEAEY+A  +G K AL  RAVL F+ P+ SG K+ + EDNQGA++  +NP S+ RSKHI+VR+HFI+E
Sbjct: 1520 YDGCAIERDLELGTTTLSQKAYIAGLMDRFGITTTASTPADPNADLGPKRDDEPGVDKPVRQAIGCLMWPATFTRPDIATALNAVQRNAHAPTMRDWKALVQILSYLNATMDLGITYVRGSGLDLEVYVDASYADRDTGRRSVTGIAVTVGGTVVSHASKTQRIVSLSTSEAEYIAAGEGVKEALFVRAVLSFIAPETSGAKIKVLEDNQGAISLVQNPFSSARSKHIDVRFHFIRE 1756          
BLAST of mRNA_H-paniculata_contig12550.1604.1 vs. uniprot
Match: A0A6H5JKS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKS3_9PHAE)

HSP 1 Score: 184 bits (467), Expect = 5.740e-50
Identity = 102/237 (43.04%), Postives = 138/237 (58.23%), Query Frame = 0
Query:   23 YLGCAFWRDMVRGVVRITQRTFIDTVIKRFGVETESDLPASQQANLGPRREDEELSNKPMRSAVGSLIWLSGMTKPDIANA----------------------------------------GLNLSVYVDADYAHRSNWRRSVSVVAEMLGGSVVSDTSTTQHYVTLSTSEAEYVAMAQGAKTALLTRAVLEFLQPQLSGRKVMMFEDNQGAMATSKNPTSTGRSKHINVRYHFIQE 219
            Y GCA  RD+  G   ++Q+ +I  ++ RFG+ T +  PA   A LGP+R+DE   +KP+R A+G L+W +  T+PDIA A                                        GL+L VYVDA YA R   RRSV+ +A  +GG+VVS  S TQ  V+LSTSEAEY+A  +G K AL  RAVL F+ P+ SG K+ + EDNQGA++  +NP S+ RSKHI+VR+HFI+E
Sbjct:  967 YDGCAIERDLELGTTTLSQKAYIAGLMDRFGITTTASTPADPNAELGPKRDDEPGVDKPVRQAIGCLMWPATFTRPDIATALNAVQRNAHAPTMRDWKALVQILSYLNATMDLGITYVRGSGLDLEVYVDASYADRDTGRRSVTGIAVTVGGTVVSHASKTQRIVSLSTSEAEYIAAGEGVKEALFVRAVLSFIAPETSGAKIKVLEDNQGAISLVQNPFSSARSKHIDVRFHFIRE 1203          
BLAST of mRNA_H-paniculata_contig12550.1604.1 vs. uniprot
Match: A0A6H5JCG0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG0_9PHAE)

HSP 1 Score: 179 bits (454), Expect = 8.820e-50
Identity = 99/234 (42.31%), Postives = 140/234 (59.83%), Query Frame = 0
Query:   25 GCAFWRDMVRGVVRITQRTFIDTVIKRFGVETESDLPASQQANLGPRREDEELSNKPMRSAVGSLIWLSGMTKPDIANA----------------------------------------GLNLSVYVDADYAHRSNWRRSVSVVAEMLGGSVVSDTSTTQHYVTLSTSEAEYVAMAQGAKTALLTRAVLEFLQPQLSGRKVMMFEDNQGAMATSKNPTSTGRSKHINVRYHFIQ 218
            GCA  RD+  G +RI+Q  +ID+++ RF V++ S +PAS   ++GP+R+DE     P+R A+GS++W+S  ++PDI+ A                                        GL L+VYVDA YA   + RRSVS +A  +GG+V+S  S TQ  V+LS++EAEY+A  +G K AL  RAVL F+ P+ SG  + + EDNQGAMA  +NP S+ RSKHI+VRYHFI+
Sbjct:  233 GCAVERDLEAGTLRISQTAYIDSIVNRFDVQSTSSIPASPGVDIGPKRDDESGGEWPVREAIGSMMWVSTFSRPDISFAVRAVARHAHAPAERHWKAIVKILAYLKETRDLGITYERGSGLGLAVYVDASYADAED-RRSVSGLATTVGGTVISHGSKTQAIVSLSSTEAEYIAAGEGVKEALFVRAVLSFIAPETSGSSIQVLEDNQGAMALVQNPLSSARSKHIDVRYHFIR 465          
BLAST of mRNA_H-paniculata_contig12550.1604.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE)

HSP 1 Score: 181 bits (459), Expect = 6.800e-49
Identity = 101/234 (43.16%), Postives = 144/234 (61.54%), Query Frame = 0
Query:   25 GCAFWRDMVRGVVRITQRTFIDTVIKRFGVETESDLPASQQANLGPRREDEELSNKPMRSAVGSLIWLSGMTKPDIANA----------------------------------------GLNLSVYVDADYAHRSNWRRSVSVVAEMLGGSVVSDTSTTQHYVTLSTSEAEYVAMAQGAKTALLTRAVLEFLQPQLSGRKVMMFEDNQGAMATSKNPTSTGRSKHINVRYHFIQ 218
            GCA  RD+  G +RI+Q  +ID++++RF V++ S +PA+  A+LGP+REDEE    P+R A+GS++W+S  ++PD++ A                                        GL L+VYVDA YA   + RRSVS +A  +GG+VVS  S TQ  V+LS++EAEY+A  +G K AL  RAVL F+ P+ SG  + + EDNQGA+A  +NP S+GR+KHI+VRYHFI+
Sbjct:  970 GCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIR 1202          
BLAST of mRNA_H-paniculata_contig12550.1604.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)

HSP 1 Score: 181 bits (459), Expect = 7.020e-49
Identity = 101/234 (43.16%), Postives = 144/234 (61.54%), Query Frame = 0
Query:   25 GCAFWRDMVRGVVRITQRTFIDTVIKRFGVETESDLPASQQANLGPRREDEELSNKPMRSAVGSLIWLSGMTKPDIANA----------------------------------------GLNLSVYVDADYAHRSNWRRSVSVVAEMLGGSVVSDTSTTQHYVTLSTSEAEYVAMAQGAKTALLTRAVLEFLQPQLSGRKVMMFEDNQGAMATSKNPTSTGRSKHINVRYHFIQ 218
            GCA  RD+  G +RI+Q  +ID++++RF V++ S +PA+  A+LGP+REDEE    P+R A+GS++W+S  ++PD++ A                                        GL L+VYVDA YA   + RRSVS +A  +GG+VVS  S TQ  V+LS++EAEY+A  +G K AL  RAVL F+ P+ SG  + + EDNQGA+A  +NP S+GR+KHI+VRYHFI+
Sbjct: 1349 GCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIR 1581          
BLAST of mRNA_H-paniculata_contig12550.1604.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE)

HSP 1 Score: 181 bits (459), Expect = 7.050e-49
Identity = 101/234 (43.16%), Postives = 144/234 (61.54%), Query Frame = 0
Query:   25 GCAFWRDMVRGVVRITQRTFIDTVIKRFGVETESDLPASQQANLGPRREDEELSNKPMRSAVGSLIWLSGMTKPDIANA----------------------------------------GLNLSVYVDADYAHRSNWRRSVSVVAEMLGGSVVSDTSTTQHYVTLSTSEAEYVAMAQGAKTALLTRAVLEFLQPQLSGRKVMMFEDNQGAMATSKNPTSTGRSKHINVRYHFIQ 218
            GCA  RD+  G +RI+Q  +ID++++RF V++ S +PA+  A+LGP+REDEE    P+R A+GS++W+S  ++PD++ A                                        GL L+VYVDA YA   + RRSVS +A  +GG+VVS  S TQ  V+LS++EAEY+A  +G K AL  RAVL F+ P+ SG  + + EDNQGA+A  +NP S+GR+KHI+VRYHFI+
Sbjct: 1369 GCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIR 1601          
BLAST of mRNA_H-paniculata_contig12550.1604.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE)

HSP 1 Score: 181 bits (459), Expect = 7.090e-49
Identity = 101/234 (43.16%), Postives = 144/234 (61.54%), Query Frame = 0
Query:   25 GCAFWRDMVRGVVRITQRTFIDTVIKRFGVETESDLPASQQANLGPRREDEELSNKPMRSAVGSLIWLSGMTKPDIANA----------------------------------------GLNLSVYVDADYAHRSNWRRSVSVVAEMLGGSVVSDTSTTQHYVTLSTSEAEYVAMAQGAKTALLTRAVLEFLQPQLSGRKVMMFEDNQGAMATSKNPTSTGRSKHINVRYHFIQ 218
            GCA  RD+  G +RI+Q  +ID++++RF V++ S +PA+  A+LGP+REDEE    P+R A+GS++W+S  ++PD++ A                                        GL L+VYVDA YA   + RRSVS +A  +GG+VVS  S TQ  V+LS++EAEY+A  +G K AL  RAVL F+ P+ SG  + + EDNQGA+A  +NP S+GR+KHI+VRYHFI+
Sbjct: 1512 GCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIR 1744          
BLAST of mRNA_H-paniculata_contig12550.1604.1 vs. uniprot
Match: A0A6H5K274_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K274_9PHAE)

HSP 1 Score: 175 bits (443), Expect = 3.590e-47
Identity = 99/234 (42.31%), Postives = 140/234 (59.83%), Query Frame = 0
Query:   25 GCAFWRDMVRGVVRITQRTFIDTVIKRFGVETESDLPASQQANLGPRREDEELSNKPMRSAVGSLIWLSGMTKPDIANA----------------------------------------GLNLSVYVDADYAHRSNWRRSVSVVAEMLGGSVVSDTSTTQHYVTLSTSEAEYVAMAQGAKTALLTRAVLEFLQPQLSGRKVMMFEDNQGAMATSKNPTSTGRSKHINVRYHFIQ 218
            GCA  RD+  G +RI+Q  +ID+++ RF V++ S +PA+  A+LGP+REDEE    P+R A+GS++W+S  ++PD++ A                                        GL L+VYVDA YA   + RRSVS +A  +GG+VVS  S TQ  V+LS+ EAEY+A  +G K AL  RAVL F+ P+  G  + + EDNQGAMA  +NP S+GR+ HI+VR+HFI+
Sbjct:  481 GCAIERDVEAGTLRISQTAYIDSMVARFDVQSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSMEAEYIAAGEGVKEALFVRAVLLFVAPETRGSSIQVLEDNQGAMALVQNPLSSGRTTHIDVRFHFIR 713          
BLAST of mRNA_H-paniculata_contig12550.1604.1 vs. uniprot
Match: A0A6H5JWY8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWY8_9PHAE)

HSP 1 Score: 166 bits (421), Expect = 1.850e-46
Identity = 93/237 (39.24%), Postives = 137/237 (57.81%), Query Frame = 0
Query:   23 YLGCAFWRDMVRGVVRITQRTFIDTVIKRFGVETESDLPASQQANLGPRREDEELSNKPMRSAVGSLIWLSGMTKPDIA----------------------------------------NAGLNLSVYVDADYAHRSNWRRSVSVVAEMLGGSVVSDTSTTQHYVTLSTSEAEYVAMAQGAKTALLTRAVLEFLQPQLSGRKVMMFEDNQGAMATSKNPTSTGRSKHINVRYHFIQE 219
            Y GCA   D+  G+ +++Q  ++++++KRF V T +  PA+  A+LGP+R+DE   +KP+R A+G L+W   +T+PDIA                                         +GL+LSV+VDA YA     RRS + +A  +GG+VV  ++ TQ     STSEAEY+A  +G K AL  R VL F+ P+ SG K+ + EDN+GA+A  +NP S+ RSKHI+VR+HFI+E
Sbjct:   95 YDGCAIVMDVENGITKLSQTAYVESMLKRFDVTTTAFTPAATDADLGPKRDDEPAVDKPVREAIGCLMWTK-LTRPDIALPLNKLQKIAQSPTGRIWNALVRIMSYLNFTKDFGITYVRGSGLDLSVFVDASYADNEVDRRSTTGLAVTVGGTVVCASTKTQPVTAQSTSEAEYMAAGEGVKEALFVRGVLSFIAPETSGAKIKVLEDNKGALAMFENPFSSARSKHIDVRFHFIRE 330          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12550.1604.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L663_9PHAE1.840e-5147.42Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L175_9PHAE4.400e-5043.04Uncharacterized protein n=9 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JKS3_9PHAE5.740e-5043.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCG0_9PHAE8.820e-5042.31Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KSG8_9PHAE6.800e-4943.16Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JZQ8_9PHAE7.020e-4943.16Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN00_9PHAE7.050e-4943.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KF60_9PHAE7.090e-4943.16Uncharacterized protein n=12 Tax=Ectocarpus sp. CC... [more]
A0A6H5K274_9PHAE3.590e-4742.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWY8_9PHAE1.850e-4639.24Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 105..219
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 105..219

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig12550contigH-paniculata_contig12550:3071..4029 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig12550.1604.1mRNA_H-paniculata_contig12550.1604.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig12550 3071..4436 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig12550.1604.1 ID=prot_H-paniculata_contig12550.1604.1|Name=mRNA_H-paniculata_contig12550.1604.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=219bp
MYGLKQAGWMWSKRLVEVLLNKYLGCAFWRDMVRGVVRITQRTFIDTVIK
RFGVETESDLPASQQANLGPRREDEELSNKPMRSAVGSLIWLSGMTKPDI
ANAGLNLSVYVDADYAHRSNWRRSVSVVAEMLGGSVVSDTSTTQHYVTLS
TSEAEYVAMAQGAKTALLTRAVLEFLQPQLSGRKVMMFEDNQGAMATSKN
PTSTGRSKHINVRYHFIQE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like