prot_H-paniculata_contig125.1566.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig125.1566.1
Unique Nameprot_H-paniculata_contig125.1566.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length73
Homology
BLAST of mRNA_H-paniculata_contig125.1566.1 vs. uniprot
Match: D8LQH0_ECTSI (Chloride channel protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQH0_ECTSI)

HSP 1 Score: 127 bits (319), Expect = 4.580e-33
Identity = 60/66 (90.91%), Postives = 61/66 (92.42%), Query Frame = 0
Query:    3 CLMDLAAYVQIGPHVINEHASAQRAYIMFRTLGLRHLVVVNHYNEVMGMITRENLLPEHFEKGGAY 68
            CLMD+A YVQIGPH INEHASA RAYIMFRTLGLRHLVVVNHYNEVMGMITRENLLPEHF  GGAY
Sbjct:  410 CLMDIAPYVQIGPHCINEHASAHRAYIMFRTLGLRHLVVVNHYNEVMGMITRENLLPEHFGAGGAY 475          
BLAST of mRNA_H-paniculata_contig125.1566.1 vs. uniprot
Match: A0A836CM41_9STRA (Chloride channel protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM41_9STRA)

HSP 1 Score: 101 bits (252), Expect = 1.860e-23
Identity = 46/57 (80.70%), Postives = 53/57 (92.98%), Query Frame = 0
Query:    3 CLMDLAAYVQIGPHVINEHASAQRAYIMFRTLGLRHLVVVNHYNEVMGMITRENLLP 59
            CL+DLAAYVQ+GPH +NEHASA RAY MFRTLGLRHL VVNH+NEV+G+I+RENLLP
Sbjct:  565 CLIDLAAYVQVGPHSMNEHASAHRAYEMFRTLGLRHLTVVNHFNEVVGIISRENLLP 621          
BLAST of mRNA_H-paniculata_contig125.1566.1 vs. uniprot
Match: A0A7R9VRQ8_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VRQ8_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 1.770e-15
Identity = 34/58 (58.62%), Postives = 43/58 (74.14%), Query Frame = 0
Query:    3 CLMDLAAYVQIGPHVINEHASAQRAYIMFRTLGLRHLVVVNHYNEVMGMITRENLLPE 60
            C +DL  Y    P+ +NE AS QR Y +FRTLGLR L VVNH N+V+G+ITR++LLPE
Sbjct:   42 CWLDLRPYANTAPYTVNETASIQRTYRLFRTLGLRFLCVVNHNNQVVGIITRKDLLPE 99          
BLAST of mRNA_H-paniculata_contig125.1566.1 vs. uniprot
Match: A0A7S2XUS9_9STRA (Chloride channel protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUS9_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 1.160e-14
Identity = 31/63 (49.21%), Postives = 48/63 (76.19%), Query Frame = 0
Query:    2 ECLMDLAAYVQIGPHVINEHASAQRAYIMFRTLGLRHLVVVNHYNEVMGMITRENLLPEHFEK 64
            EC +DL  Y    P++I E  S +R Y +FRTLGLRH++V+N++N+V+GMITR++LL +H ++
Sbjct:  538 ECWIDLRPYTNAAPYIIQESTSVERTYRLFRTLGLRHIIVINNHNQVVGMITRKDLLADHLKE 600          
BLAST of mRNA_H-paniculata_contig125.1566.1 vs. uniprot
Match: A0A7S4S7C7_9STRA (Chloride channel protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4S7C7_9STRA)

HSP 1 Score: 76.6 bits (187), Expect = 1.170e-14
Identity = 35/58 (60.34%), Postives = 43/58 (74.14%), Query Frame = 0
Query:    3 CLMDLAAYVQIGPHVINEHASAQRAYIMFRTLGLRHLVVVNHYNEVMGMITRENLLPE 60
            C +DL  Y    PH +NE AS QR Y +FRTLGLR L VVNH N+V+G+ITR++LLPE
Sbjct:  798 CWLDLRPYANTAPHTVNETASIQRTYRLFRTLGLRFLCVVNHNNQVVGIITRKDLLPE 855          
BLAST of mRNA_H-paniculata_contig125.1566.1 vs. uniprot
Match: A0A7S1D5H2_CYCTE (Chloride channel protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D5H2_CYCTE)

HSP 1 Score: 75.1 bits (183), Expect = 3.910e-14
Identity = 34/56 (60.71%), Postives = 44/56 (78.57%), Query Frame = 0
Query:    5 MDLAAYVQIGPHVINEHASAQRAYIMFRTLGLRHLVVVNHYNEVMGMITRENLLPE 60
            +DL  Y    P+ +NE AS QR Y +FRTLGLR LVVVNH+N+V+G+ITR++LLPE
Sbjct:  359 LDLRPYANTAPYTVNETASIQRTYRLFRTLGLRFLVVVNHHNQVVGIITRKDLLPE 414          
BLAST of mRNA_H-paniculata_contig125.1566.1 vs. uniprot
Match: A0A7R9ZRT7_9STRA (Chloride channel protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZRT7_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 4.510e-14
Identity = 34/58 (58.62%), Postives = 43/58 (74.14%), Query Frame = 0
Query:    3 CLMDLAAYVQIGPHVINEHASAQRAYIMFRTLGLRHLVVVNHYNEVMGMITRENLLPE 60
            C +DL  Y    P+ +NE AS QR Y +FRTLGLR L VVNH N+V+G+ITR++LLPE
Sbjct:  240 CWLDLRPYANTAPYTVNETASIQRTYRLFRTLGLRFLCVVNHNNQVVGIITRKDLLPE 297          
BLAST of mRNA_H-paniculata_contig125.1566.1 vs. uniprot
Match: A0A1E7FXI3_9STRA (Chloride channel protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FXI3_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 5.570e-14
Identity = 35/58 (60.34%), Postives = 43/58 (74.14%), Query Frame = 0
Query:    3 CLMDLAAYVQIGPHVINEHASAQRAYIMFRTLGLRHLVVVNHYNEVMGMITRENLLPE 60
            C +DL  Y    P+ INE AS QR Y +FRTLGLR L VVNH N+V+G+ITR++LLPE
Sbjct:  717 CWLDLRPYANTAPYTINETASIQRTYRLFRTLGLRFLCVVNHNNQVVGIITRKDLLPE 774          
BLAST of mRNA_H-paniculata_contig125.1566.1 vs. uniprot
Match: A0A1Z5JAK4_FISSO (Chloride channel protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JAK4_FISSO)

HSP 1 Score: 73.9 bits (180), Expect = 1.040e-13
Identity = 39/74 (52.70%), Postives = 48/74 (64.86%), Query Frame = 0
Query:    3 CLMDLAAYVQIGPHVINEHASAQRAYIMFRTLGLRHLVVVNHYNEVMGMITRENLLP----EHFEKGGAYHSNE 72
            C +DL  Y    P+ INE AS QR Y +FRTLGLR L VVNH N+V+G+ITR++LLP    E   +G   H NE
Sbjct:  784 CWLDLRPYANTAPYTINETASIQRTYRLFRTLGLRFLCVVNHNNQVVGIITRKDLLPRALSESLLRGRNAHVNE 857          
BLAST of mRNA_H-paniculata_contig125.1566.1 vs. uniprot
Match: A0A7S0UJS8_9STRA (Chloride channel protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UJS8_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 2.640e-13
Identity = 34/57 (59.65%), Postives = 42/57 (73.68%), Query Frame = 0
Query:    3 CLMDLAAYVQIGPHVINEHASAQRAYIMFRTLGLRHLVVVNHYNEVMGMITRENLLP 59
            C +DL  Y    P+ INE AS QR Y +FRTLGLR L VVNH N+V+G+ITR++LLP
Sbjct:  661 CWLDLRPYANTAPYTINETASIQRTYRLFRTLGLRFLCVVNHNNQVVGIITRKDLLP 717          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig125.1566.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQH0_ECTSI4.580e-3390.91Chloride channel protein n=1 Tax=Ectocarpus silicu... [more]
A0A836CM41_9STRA1.860e-2380.70Chloride channel protein n=1 Tax=Tribonema minus T... [more]
A0A7R9VRQ8_9STRA1.770e-1558.62Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S2XUS9_9STRA1.160e-1449.21Chloride channel protein n=1 Tax=Fibrocapsa japoni... [more]
A0A7S4S7C7_9STRA1.170e-1460.34Chloride channel protein n=3 Tax=Ditylum brightwel... [more]
A0A7S1D5H2_CYCTE3.910e-1460.71Chloride channel protein n=1 Tax=Cyclophora tenuis... [more]
A0A7R9ZRT7_9STRA4.510e-1458.62Chloride channel protein n=1 Tax=Craspedostauros a... [more]
A0A1E7FXI3_9STRA5.570e-1460.34Chloride channel protein n=1 Tax=Fragilariopsis cy... [more]
A0A1Z5JAK4_FISSO1.040e-1352.70Chloride channel protein n=2 Tax=Fistulifera solar... [more]
A0A7S0UJS8_9STRA2.640e-1359.65Chloride channel protein n=1 Tax=Pseudo-nitzschia ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.580.10coord: 3..63
e-value: 5.3E-8
score: 35.0
NoneNo IPR availablePANTHERPTHR11689CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBERcoord: 3..59
NoneNo IPR availablePANTHERPTHR11689:SF136CHLORIDE CHANNEL PROTEIN Bcoord: 3..59
NoneNo IPR availableSUPERFAMILY54631CBS-domain paircoord: 6..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig125contigH-paniculata_contig125:49872..50799 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig125.1566.1mRNA_H-paniculata_contig125.1566.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig125 49872..50829 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig125.1566.1 ID=prot_H-paniculata_contig125.1566.1|Name=mRNA_H-paniculata_contig125.1566.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=73bp
MECLMDLAAYVQIGPHVINEHASAQRAYIMFRTLGLRHLVVVNHYNEVMG
MITRENLLPEHFEKGGAYHSNEG
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