prot_H-paniculata_contig12334.1475.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig12334.1475.1
Unique Nameprot_H-paniculata_contig12334.1475.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length336
Homology
BLAST of mRNA_H-paniculata_contig12334.1475.1 vs. uniprot
Match: A0A6H5LBJ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBJ9_9PHAE)

HSP 1 Score: 202 bits (514), Expect = 5.480e-55
Identity = 128/292 (43.84%), Postives = 176/292 (60.27%), Query Frame = 0
Query:   42 VRPLALAGAS-NSSALVNACRIENIVIHDGVPLAAGSAAMTDGSLSTKCAAKLVVVSIAGDKTLLNPSTSTDARLNKLFQSVKDSLHPRGTVAIMVPHPWHLHAGRIHSALTHASVGLHVEDHP-PLQYKGMRSGRTSQNAVNHLRYNAYMVMLAHNDPGDGAGFTCNKRVLVDDVNGNSSGTVRAPLPLMNDIPVESAKTDIPLRCCLFLVNRFFNMGDAVISLGAESHQIMETTLDRARKVKVFVASSDGAQEEVARRAETAFLAAYKEGKFQASSSPANEVLIRHGILP 331
            VRP  L G S N + L++ CR EN  +HD VPL    + +    LS + A KLV+VSI  ++ LL  S +T+  L ++  +V+  +HP GT+A++VPHPW  H  R+  A+  A VGL VEDHP  L Y     GR    A NHL+ +  MV+L HN+   GA FTCNKRV VDD  G  S    + + LM D+  E A TDI +R   FL+NR+ + GD V SL AE H ++E  L+R+R+V+VFVA+ +  +EEV +    +F  AYK GK++AS+S A E +I    LP
Sbjct:  305 VRPSLLGGPSGNEAVLMDKCRDENTTLHDIVPLDPTGSDVD--KLSFRNAPKLVIVSIGAEQRLLRTSEATNTHLRRVIDNVRGRMHPDGTIALVVPHPWSAHFHRLQEAVRDACVGLVVEDHPLMLNYSKRVGGRPPIRAENHLKNHLDMVLLIHNE---GATFTCNKRVTVDDPFGFGSDASPS-MQLMTDVEYEGAATDIVMRPLHFLINRYTHAGDTVASLSAERHNVVEAALERSRRVEVFVANPNS-KEEVRKNLLASFSRAYKAGKWKASTSLAQERVISPSCLP 589          
BLAST of mRNA_H-paniculata_contig12334.1475.1 vs. uniprot
Match: A0A6H5KC60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC60_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 1.960e-12
Identity = 46/115 (40.00%), Postives = 67/115 (58.26%), Query Frame = 0
Query:   42 VRPLALAGAS-NSSALVNACRIENIVIHDGVPLAAGSAAMTDGSLSTKCAAKLVVVSIAGDKTLLNPSTSTDARLNKLFQSVKDSLHPRGTVAIMVPHPWHLHAGRIHSALTHAS 155
            VRP  L G S N + L++ CR EN  +HD VPL    + +    LS + A KLV+VSI  ++ LL  S +T+  L ++  +V+  +HP GT+A++VPHPW  H  R+    T  S
Sbjct:  363 VRPSLLGGPSGNEAVLMDKCRDENATLHDTVPLDPTGSDVD--KLSFRNAPKLVIVSIGAEQRLLKTSEATNTHLRRVIDNVRGRMHPDGTIALVVPHPWSAHFHRLQGDSTFLS 475          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12334.1475.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LBJ9_9PHAE5.480e-5543.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KC60_9PHAE1.960e-1240.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig12334contigH-paniculata_contig12334:602..3006 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig12334.1475.1mRNA_H-paniculata_contig12334.1475.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig12334 602..3063 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig12334.1475.1 ID=prot_H-paniculata_contig12334.1475.1|Name=mRNA_H-paniculata_contig12334.1475.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=336bp
MCSPASATETKKKGKKMKACDSADSSEQPVKKKARKTTSATVRPLALAGA
SNSSALVNACRIENIVIHDGVPLAAGSAAMTDGSLSTKCAAKLVVVSIAG
DKTLLNPSTSTDARLNKLFQSVKDSLHPRGTVAIMVPHPWHLHAGRIHSA
LTHASVGLHVEDHPPLQYKGMRSGRTSQNAVNHLRYNAYMVMLAHNDPGD
GAGFTCNKRVLVDDVNGNSSGTVRAPLPLMNDIPVESAKTDIPLRCCLFL
VNRFFNMGDAVISLGAESHQIMETTLDRARKVKVFVASSDGAQEEVARRA
ETAFLAAYKEGKFQASSSPANEVLIRHGILPDRVQV
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