prot_H-paniculata_contig1232.1466.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1232.1466.1
Unique Nameprot_H-paniculata_contig1232.1466.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length50
Homology
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BLAST of mRNA_H-paniculata_contig1232.1466.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE)

HSP 1 Score: 55.1 bits (131), Expect = 1.740e-7
Identity = 25/49 (51.02%), Postives = 35/49 (71.43%), Query Frame = 0 
Query:    2 FFLGLVSLAEEKRWFRSAACYVARRAGIPVELKVLAVLQVLGRGHCFDD 50
            FF+ LV+L +++ WF +     + R GIPV+LKVLA LQ+L RG+CF D
Sbjct:  126 FFVELVALVKQRDWFPTGKQDASGRRGIPVQLKVLACLQILARGNCFAD 174
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BLAST of mRNA_H-paniculata_contig1232.1466.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 50.8 bits (120), Expect = 5.450e-6
Identity = 24/49 (48.98%), Postives = 31/49 (63.27%), Query Frame = 0 
Query:    2 FFLGLVSLAEEKRWFRSAACYVARRAGIPVELKVLAVLQVLGRGHCFDD 50
            FF+ LV L  ++ WF +    V  R  +PVELKVLA LQ+L RG+ F D
Sbjct:  142 FFVHLVELVRDRDWFPTGESDVTGRQAVPVELKVLACLQILSRGNVFAD 190
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1232.1466.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JAU4_9PHAE1.740e-751.02Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPH7_9PHAE5.450e-648.98Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1232contigH-paniculata_contig1232:26987..27547 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1232.1466.1mRNA_H-paniculata_contig1232.1466.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1232 26987..27547 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1232.1466.1 ID=prot_H-paniculata_contig1232.1466.1|Name=mRNA_H-paniculata_contig1232.1466.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=50bp
MFFLGLVSLAEEKRWFRSAACYVARRAGIPVELKVLAVLQVLGRGHCFDD
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