prot_H-paniculata_contig12262.1442.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig12262.1442.1
Unique Nameprot_H-paniculata_contig12262.1442.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length55
Homology
BLAST of mRNA_H-paniculata_contig12262.1442.1 vs. uniprot
Match: A0A6H5JYX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYX7_9PHAE)

HSP 1 Score: 84.0 bits (206), Expect = 1.380e-17
Identity = 40/54 (74.07%), Postives = 45/54 (83.33%), Query Frame = 0
Query:    1 MDNSRLNDGKPHVLVLDGHASHVTIDVLKYAMEHNIHLFQLPSHSSHITQPLDV 54
            + +  L DGKPHVLVLDGHASHVT+DV+K A+  NIHL QLPSH SHITQPLDV
Sbjct:  281 LGDRNLLDGKPHVLVLDGHASHVTLDVIKLAISLNIHLVQLPSHMSHITQPLDV 334          
BLAST of mRNA_H-paniculata_contig12262.1442.1 vs. uniprot
Match: A0A6H5KMD7_9PHAE (DDE-1 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMD7_9PHAE)

HSP 1 Score: 77.8 bits (190), Expect = 1.590e-17
Identity = 37/54 (68.52%), Postives = 43/54 (79.63%), Query Frame = 0
Query:    1 MDNSRLNDGKPHVLVLDGHASHVTIDVLKYAMEHNIHLFQLPSHSSHITQPLDV 54
            + +  L DGKPHVLVLDGH SHV++DV+K A+  NIHL QL SH SHITQPLDV
Sbjct:   17 LGDRNLLDGKPHVLVLDGHTSHVSLDVIKLAISLNIHLVQLASHMSHITQPLDV 70          
BLAST of mRNA_H-paniculata_contig12262.1442.1 vs. uniprot
Match: A0A6H5KP55_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP55_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 1.990e-17
Identity = 39/49 (79.59%), Postives = 43/49 (87.76%), Query Frame = 0
Query:    6 LNDGKPHVLVLDGHASHVTIDVLKYAMEHNIHLFQLPSHSSHITQPLDV 54
            L DGKPHVLVLDGHASHV++DV+K A+  NIHL QLPSH SHITQPLDV
Sbjct:  137 LLDGKPHVLVLDGHASHVSLDVIKLAISLNIHLVQLPSHMSHITQPLDV 185          
BLAST of mRNA_H-paniculata_contig12262.1442.1 vs. uniprot
Match: A0A6H5JR26_9PHAE (DDE-1 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR26_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 2.530e-17
Identity = 39/49 (79.59%), Postives = 43/49 (87.76%), Query Frame = 0
Query:    6 LNDGKPHVLVLDGHASHVTIDVLKYAMEHNIHLFQLPSHSSHITQPLDV 54
            L DGKPHVLVLDGHASHV++DV+K A+  NIHL QLPSH SHITQPLDV
Sbjct:  210 LLDGKPHVLVLDGHASHVSLDVIKLAISLNIHLVQLPSHMSHITQPLDV 258          
BLAST of mRNA_H-paniculata_contig12262.1442.1 vs. uniprot
Match: A0A6H5JBS6_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBS6_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 8.460e-17
Identity = 39/54 (72.22%), Postives = 46/54 (85.19%), Query Frame = 0
Query:    1 MDNSRLNDGKPHVLVLDGHASHVTIDVLKYAMEHNIHLFQLPSHSSHITQPLDV 54
            +D+  + DGKPH LVLDGHASHV+ +V+K AME NI LFQLPSH+SHITQPLDV
Sbjct:  261 LDDRGVLDGKPHTLVLDGHASHVSYEVIKLAMELNIILFQLPSHTSHITQPLDV 314          
BLAST of mRNA_H-paniculata_contig12262.1442.1 vs. uniprot
Match: A0A6H5K306_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K306_9PHAE)

HSP 1 Score: 77.4 bits (189), Expect = 1.030e-16
Identity = 37/54 (68.52%), Postives = 44/54 (81.48%), Query Frame = 0
Query:    1 MDNSRLNDGKPHVLVLDGHASHVTIDVLKYAMEHNIHLFQLPSHSSHITQPLDV 54
            + +  L DGKPHVLVLDGHASHV++DV+K A+  +IHL QLPSH SHITQPL V
Sbjct:   73 LSDRNLLDGKPHVLVLDGHASHVSLDVIKLAISLDIHLVQLPSHMSHITQPLVV 126          
BLAST of mRNA_H-paniculata_contig12262.1442.1 vs. uniprot
Match: A0A6H5KHG9_9PHAE (DDE-1 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHG9_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 1.350e-16
Identity = 36/54 (66.67%), Postives = 46/54 (85.19%), Query Frame = 0
Query:    1 MDNSRLNDGKPHVLVLDGHASHVTIDVLKYAMEHNIHLFQLPSHSSHITQPLDV 54
            +D+  + DGKPH+LVLDGHA HV+ +V++ AME NI LFQ+PSH+SHITQPLDV
Sbjct:   87 LDDRGVFDGKPHILVLDGHALHVSYEVIELAMELNIILFQMPSHTSHITQPLDV 140          
BLAST of mRNA_H-paniculata_contig12262.1442.1 vs. uniprot
Match: A0A6H5L108_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L108_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 1.460e-16
Identity = 38/54 (70.37%), Postives = 45/54 (83.33%), Query Frame = 0
Query:    1 MDNSRLNDGKPHVLVLDGHASHVTIDVLKYAMEHNIHLFQLPSHSSHITQPLDV 54
            +D   + +GKPHVLV DGHASHV+ +V+K AME NI LFQLPSH+SHITQPLDV
Sbjct:  148 LDGRGVLEGKPHVLVHDGHASHVSYEVIKLAMELNIILFQLPSHTSHITQPLDV 201          
BLAST of mRNA_H-paniculata_contig12262.1442.1 vs. uniprot
Match: A0A6H5JV04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV04_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 2.410e-16
Identity = 37/49 (75.51%), Postives = 45/49 (91.84%), Query Frame = 0
Query:    6 LNDGKPHVLVLDGHASHVTIDVLKYAMEHNIHLFQLPSHSSHITQPLDV 54
            L DGKPH+L+LDGHASHV+++V++ AME NI LFQLPSH+SHITQPLDV
Sbjct:  270 LIDGKPHILLLDGHASHVSVEVIQLAMELNIVLFQLPSHTSHITQPLDV 318          
BLAST of mRNA_H-paniculata_contig12262.1442.1 vs. uniprot
Match: A0A6H5JJ12_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ12_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 2.410e-16
Identity = 37/49 (75.51%), Postives = 45/49 (91.84%), Query Frame = 0
Query:    6 LNDGKPHVLVLDGHASHVTIDVLKYAMEHNIHLFQLPSHSSHITQPLDV 54
            L DGKPH+L+LDGHASHV+++V++ AME NI LFQLPSH+SHITQPLDV
Sbjct:  511 LIDGKPHILLLDGHASHVSVEVIQLAMELNIVLFQLPSHTSHITQPLDV 559          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12262.1442.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JYX7_9PHAE1.380e-1774.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KMD7_9PHAE1.590e-1768.52DDE-1 domain-containing protein (Fragment) n=1 Tax... [more]
A0A6H5KP55_9PHAE1.990e-1779.59DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JR26_9PHAE2.530e-1779.59DDE-1 domain-containing protein (Fragment) n=1 Tax... [more]
A0A6H5JBS6_9PHAE8.460e-1772.22DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K306_9PHAE1.030e-1668.52DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KHG9_9PHAE1.350e-1666.67DDE-1 domain-containing protein (Fragment) n=1 Tax... [more]
A0A6H5L108_9PHAE1.460e-1670.37DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JV04_9PHAE2.410e-1675.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJ12_9PHAE2.410e-1675.51Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004875DDE superfamily endonuclease domainPFAMPF03184DDE_1coord: 8..54
e-value: 2.9E-8
score: 33.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig12262contigH-paniculata_contig12262:4297..4461 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig12262.1442.1mRNA_H-paniculata_contig12262.1442.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig12262 4111..4464 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig12262.1442.1 ID=prot_H-paniculata_contig12262.1442.1|Name=mRNA_H-paniculata_contig12262.1442.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=55bp
MDNSRLNDGKPHVLVLDGHASHVTIDVLKYAMEHNIHLFQLPSHSSHITQ
PLDV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004875DDE_SF_endonuclease_dom