mRNA_H-paniculata_contig12262.1442.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig12262.1442.1 vs. uniprot
Match: A0A6H5JT16_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT16_9PHAE) HSP 1 Score: 139 bits (349), Expect = 7.800e-39 Identity = 68/118 (57.63%), Postives = 88/118 (74.58%), Query Frame = 1 Query: 1 FMDNSRLNDGKPHVLVLDGHASHVTIDVLKYAMEHNIHLFQLPSHSSHITQPLDV*AFGLFKREITNILTTFSQKNGIRMPVKSDIAGIVRDAWERVFTPPNISASFAGAGIFPIDKE 354 +D +N G PHVLVLDGHASHVT +V+K A + NI L+Q+PSHSSH+ QPLDV +FG FKREIT +L+ F +NG R+P KSD+ GI+ DAW R F+ +SFAGAG++P+D E Sbjct: 83 LLDRGLIN-GTPHVLVLDGHASHVTYEVVKLARDLNIVLYQIPSHSSHVVQPLDVVSFGSFKREITKVLSAFPARNGGRVPAKSDMLGILGDAWLRSFSEEQNISSFAGAGLWPVDGE 199
BLAST of mRNA_H-paniculata_contig12262.1442.1 vs. uniprot
Match: A0A6H5KP55_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP55_9PHAE) HSP 1 Score: 138 bits (348), Expect = 4.190e-38 Identity = 66/112 (58.93%), Postives = 83/112 (74.11%), Query Frame = 1 Query: 19 LNDGKPHVLVLDGHASHVTIDVLKYAMEHNIHLFQLPSHSSHITQPLDV*AFGLFKREITNILTTFSQKNGIRMPVKSDIAGIVRDAWERVFTPPNISASFAGAGIFPIDKE 354 L DGKPHVLVLDGHASHV++DV+K A+ NIHL QLPSH SHITQPLDV FG FK+E+ ++ F +NG +P K D+AG++ AW FTP SFAGAG++P+D+E Sbjct: 137 LLDGKPHVLVLDGHASHVSLDVIKLAISLNIHLVQLPSHMSHITQPLDVAGFGCFKKELAKVIQAFPARNGGALPRKRDMAGMIGLAWGPSFTPEINKVSFAGAGLWPVDRE 248
BLAST of mRNA_H-paniculata_contig12262.1442.1 vs. uniprot
Match: A0A6H5JYX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYX7_9PHAE) HSP 1 Score: 142 bits (358), Expect = 7.570e-38 Identity = 68/117 (58.12%), Postives = 86/117 (73.50%), Query Frame = 1 Query: 4 MDNSRLNDGKPHVLVLDGHASHVTIDVLKYAMEHNIHLFQLPSHSSHITQPLDV*AFGLFKREITNILTTFSQKNGIRMPVKSDIAGIVRDAWERVFTPPNISASFAGAGIFPIDKE 354 + + L DGKPHVLVLDGHASHVT+DV+K A+ NIHL QLPSH SHITQPLDV FG FK+E+ ++ F +NG +P K D+AG++ AW FTP ASFAGAG++P+D+E Sbjct: 281 LGDRNLLDGKPHVLVLDGHASHVTLDVIKLAISLNIHLVQLPSHMSHITQPLDVAGFGCFKKELAKVIQAFPARNGGALPRKRDMAGMIGLAWGSSFTPEINKASFAGAGLWPVDRE 397
BLAST of mRNA_H-paniculata_contig12262.1442.1 vs. uniprot
Match: A0A6H5K717_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K717_9PHAE) HSP 1 Score: 135 bits (340), Expect = 8.250e-38 Identity = 66/116 (56.90%), Postives = 85/116 (73.28%), Query Frame = 1 Query: 1 FMDNSRLNDGKPHVLVLDGHASHVTIDVLKYAMEHNIHLFQLPSHSSHITQPLDV*AFGLFKREITNILTTFSQKNGIRMPVKSDIAGIVRDAWERVFTPPNISASFAGAGIFPID 348 +D +N G PHVL LDGHASHVT +V+K A E NI L+Q+PSHSSH+ QPLDV +FG FKREIT +L+ F +NG R+P KSD+ GI+ DAW R F+ +SF GAG++P+D Sbjct: 87 LLDRDLIN-GTPHVLALDGHASHVTYEVVKLARELNIVLYQIPSHSSHVVQPLDVGSFGSFKREITKVLSAFPARNGGRVPAKSDMLGILGDAWLRSFSEEQNISSFVGAGLWPVD 201
BLAST of mRNA_H-paniculata_contig12262.1442.1 vs. uniprot
Match: A0A6H5L5E2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5E2_9PHAE) HSP 1 Score: 140 bits (352), Expect = 2.270e-37 Identity = 68/118 (57.63%), Postives = 89/118 (75.42%), Query Frame = 1 Query: 1 FMDNSRLNDGKPHVLVLDGHASHVTIDVLKYAMEHNIHLFQLPSHSSHITQPLDV*AFGLFKREITNILTTFSQKNGIRMPVKSDIAGIVRDAWERVFTPPNISASFAGAGIFPIDKE 354 +D +N G PHVLVLDGHASHVT +V+K A + NI L+Q+PSHSSH+ QPLDV +FG FKREIT +L+ F +NG R+P KSD+ GI+ DAW R F+ ++SFAGAG++P+D E Sbjct: 267 LLDRGLIN-GTPHVLVLDGHASHVTYEVVKLARDLNIVLYQIPSHSSHVVQPLDVGSFGSFKREITKVLSAFPARNGGRVPAKSDMLGILGDAWLRSFSEERNTSSFAGAGLWPVDGE 383
BLAST of mRNA_H-paniculata_contig12262.1442.1 vs. uniprot
Match: A0A6H5JRA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRA3_9PHAE) HSP 1 Score: 140 bits (352), Expect = 2.460e-37 Identity = 64/112 (57.14%), Postives = 88/112 (78.57%), Query Frame = 1 Query: 19 LNDGKPHVLVLDGHASHVTIDVLKYAMEHNIHLFQLPSHSSHITQPLDV*AFGLFKREITNILTTFSQKNGIRMPVKSDIAGIVRDAWERVFTPPNISASFAGAGIFPIDKE 354 L DGKPH+L+LDGHASHV+++V+K AM I LFQLPSH+SHITQPLDV AFG FK+ +T +L +F + +G +P+K D+ G++ DAW+ FTP +SFAGAG++P++KE Sbjct: 285 LLDGKPHILLLDGHASHVSVEVIKLAMNLKIILFQLPSHTSHITQPLDVVAFGSFKKSVTRVLASFYRNSGGLLPLKRDMPGVIADAWKLSFTPEINKSSFAGAGLWPVNKE 396
BLAST of mRNA_H-paniculata_contig12262.1442.1 vs. uniprot
Match: A0A6H5J9B8_9PHAE (DDE-1 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9B8_9PHAE) HSP 1 Score: 138 bits (347), Expect = 2.820e-37 Identity = 64/117 (54.70%), Postives = 86/117 (73.50%), Query Frame = 1 Query: 4 MDNSRLNDGKPHVLVLDGHASHVTIDVLKYAMEHNIHLFQLPSHSSHITQPLDV*AFGLFKREITNILTTFSQKNGIRMPVKSDIAGIVRDAWERVFTPPNISASFAGAGIFPIDKE 354 +D+ + DGKPH LVLD HAS+V+ +V+K AME NI LFQLPSH+SHITQPLDV AFG FK+E+T +L + NG +P+K D+ G++ AW+R FTP ASF G G++P+D + Sbjct: 87 LDDRGVLDGKPHTLVLDEHASYVSYEVIKLAMELNIILFQLPSHTSHITQPLDVVAFGTFKKEVTTVLQDYYHANGGLLPLKRDVPGVIAAAWQRSFTPERNKASFGGVGLWPVDMD 203
BLAST of mRNA_H-paniculata_contig12262.1442.1 vs. uniprot
Match: A0A6H5KGL1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGL1_9PHAE) HSP 1 Score: 137 bits (345), Expect = 9.110e-37 Identity = 62/117 (52.99%), Postives = 86/117 (73.50%), Query Frame = 1 Query: 4 MDNSRLNDGKPHVLVLDGHASHVTIDVLKYAMEHNIHLFQLPSHSSHITQPLDV*AFGLFKREITNILTTFSQKNGIRMPVKSDIAGIVRDAWERVFTPPNISASFAGAGIFPIDKE 354 +D+ + DGKPH+LVLDGHASHV+ + +K AM+ NI LF+LPSH+SHITQPLDV AFG FK+E+T +L + NG +P+K D+ G++ AW+ TP ASF GAG++P+D + Sbjct: 87 LDDRGVLDGKPHILVLDGHASHVSYEFIKLAMDLNIILFKLPSHTSHITQPLDVVAFGTFKKEVTKVLQDYYHANGGLLPLKRDVPGVIAAAWQNSLTPERNKASFGGAGLWPVDMD 203
BLAST of mRNA_H-paniculata_contig12262.1442.1 vs. uniprot
Match: A0A6H5L0Y6_9PHAE (DDE-1 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Y6_9PHAE) HSP 1 Score: 138 bits (347), Expect = 1.610e-36 Identity = 65/112 (58.04%), Postives = 82/112 (73.21%), Query Frame = 1 Query: 19 LNDGKPHVLVLDGHASHVTIDVLKYAMEHNIHLFQLPSHSSHITQPLDV*AFGLFKREITNILTTFSQKNGIRMPVKSDIAGIVRDAWERVFTPPNISASFAGAGIFPIDKE 354 L DGKPHVLVLDGHASHV+ +V++ A NIHL QLPSH SH+TQPLDV FG FK+E+ + +F KNG +P K D+AG++ AW FTP ASFAGAG++P+DK+ Sbjct: 194 LLDGKPHVLVLDGHASHVSFEVIQLAKSLNIHLVQLPSHISHVTQPLDVAGFGCFKKELNTSIASFPSKNGGALPRKRDMAGLIGSAWSTSFTPEINKASFAGAGLWPVDKD 305
BLAST of mRNA_H-paniculata_contig12262.1442.1 vs. uniprot
Match: A0A6H5JBS6_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBS6_9PHAE) HSP 1 Score: 137 bits (346), Expect = 2.050e-36 Identity = 65/117 (55.56%), Postives = 86/117 (73.50%), Query Frame = 1 Query: 4 MDNSRLNDGKPHVLVLDGHASHVTIDVLKYAMEHNIHLFQLPSHSSHITQPLDV*AFGLFKREITNILTTFSQKNGIRMPVKSDIAGIVRDAWERVFTPPNISASFAGAGIFPIDKE 354 +D+ + DGKPH LVLDGHASHV+ +V+K AME NI LFQLPSH+SHITQPLDV AFG FK+E+T +L + NG +P+K D+ G++ AW+R T +ASF GAG+ P+D + Sbjct: 261 LDDRGVLDGKPHTLVLDGHASHVSYEVIKLAMELNIILFQLPSHTSHITQPLDVVAFGTFKKEVTKVLQDYYHANGGLLPLKRDVPGVIAAAWQRSLTLERNNASFGGAGLRPVDMD 377 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12262.1442.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig12262.1442.1 >prot_H-paniculata_contig12262.1442.1 ID=prot_H-paniculata_contig12262.1442.1|Name=mRNA_H-paniculata_contig12262.1442.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=55bp MDNSRLNDGKPHVLVLDGHASHVTIDVLKYAMEHNIHLFQLPSHSSHITQback to top mRNA from alignment at H-paniculata_contig12262:4111..4464- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig12262.1442.1 ID=mRNA_H-paniculata_contig12262.1442.1|Name=mRNA_H-paniculata_contig12262.1442.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=354bp|location=Sequence derived from alignment at H-paniculata_contig12262:4111..4464- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig12262:4111..4464- >mRNA_H-paniculata_contig12262.1442.1 ID=mRNA_H-paniculata_contig12262.1442.1|Name=mRNA_H-paniculata_contig12262.1442.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=330bp|location=Sequence derived from alignment at H-paniculata_contig12262:4111..4464- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |