prot_H-paniculata_contig12119.1342.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig12119.1342.1
Unique Name	prot_H-paniculata_contig12119.1342.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	377

Homology

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BLAST of mRNA_H-paniculata_contig12119.1342.1 vs. uniprot
Match: D8LFT6_ECTSI (Similar to A-kinase anchoring protein 18 gamma n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFT6_ECTSI)

HSP 1 Score: 183 bits (465), Expect = 1.750e-51
Identity = 122/291 (41.92%), Postives = 167/291 (57.39%), Query Frame = 0

Query:   86 IMPQVAAVQHDIIADHAHLQDAAIPLQDLHLTLFVATLGEEDGSLKLAKETLEGCRDILQDHGLLVCSALDGNEDEQPAEPVDNSAIEETTSNVRQSEKTGGHATRPSKTDSARSNASVTSPPPTPTPLLLAFQGLGNFYSKVLYARLVEDDQASRFYSLASALHSRFSQARLLEEASLPPTAASMSVTSNAGIGEKVGDVVEKK--------NKFVFEPHLTIMKTSKLENRKTLMPPSSYIGHADSDF-GSHVPTAVELSSMQDREETPDVPEGFESRQYYKCEHRLAL 367
            I  +++ +Q DI+A + HL DAAIP+Q  HLTLFV TL E+DGSL+ A++TLE C D+L +HGL     +D       AE V +  +      +  S +T       S                   PL+L+F+ LG+F +K+L+A+LVED+QA+R   LAS+LH RFS+A L+EEA+  P+            GEK GD             + F F PHLTIMKTSKL +R TL+P  SY  + +    G H P++VELSSM ++E+ P + EG+E R YYKCEHRL L
Sbjct:   55 IWAKISTIQGDILAGNQHLTDAAIPVQASHLTLFVLTLSEKDGSLQQARDTLEHCGDLLLEHGL--SPEVDLQASASRAESVPDDHMHPAALAIGDSNETAPGVAAAS-------------------PLMLSFRDLGHFRNKILFAKLVEDEQATRLRGLASSLHRRFSEAGLVEEAAGFPSRK----------GEKRGDXXXXXXXXXXXXXDSFEFTPHLTIMKTSKLRDRGTLIPADSYDRYQNGFVVGHHAPSSVELSSMLEKEDVPPL-EGWEPRPYYKCEHRLGL 313

[Close]

BLAST of mRNA_H-paniculata_contig12119.1342.1 vs. uniprot
Match: A0A6H5K2C7_9PHAE (AKAP7_NLS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2C7_9PHAE)

HSP 1 Score: 166 bits (419), Expect = 3.340e-45
Identity = 114/267 (42.70%), Postives = 151/267 (56.55%), Query Frame = 0

Query:  106 DAAIPLQDLHLTLFVATLGEEDGSLKLAKETLEGCRDILQDHGLLVCSALDGNEDEQPAEPVDNSAIEETTSNVRQSEKTGGHATRPSKTDSARSNASVTSPPPTPTPLLLAFQGLGNFYSKVLYARLVEDDQASRFYSLASALHSRFSQARLLEEASLPPTAASMSVTSNAGIGEKVGDVVE----KKNKFVFEPHLTIMKTSKLENRKTLMPPSSYIGHADSDF-GSHVPTAVELSSMQDREETPDVPEGFESRQYYKCEHRLAL 367
            DAAIP+Q  HLTLFV  L EEDGSL+ A++TLE C D+L +HGL     +D        E V +  +      +  S +T   AT  S                   PL L+F+ LG+F +KVL+A+LVED+QA+R   LAS+LH RFS+A L+E A+  P+            G K GD  +      + F F PHLTIMKTSKL +R TL+P  SY  +      G H P++VELSSM ++E+ P + EG+E + YYKCEHRL L
Sbjct:   35 DAAIPVQASHLTLFVLRLSEEDGSLQQARDTLEHCGDLLLEHGL--SPEVDLPASASSTESVPDDGMHPAALGIGDSNETAPGATAAS-------------------PLTLSFRDLGHFRNKVLFAKLVEDEQATRLRGLASSLHQRFSEAGLVEGAAGFPSRK----------GGKRGDGGDGSGTSSDSFEFTPHLTIMKTSKLRDRGTLIPADSYDRYQSGFLVGHHAPSSVELSSMLEKEDVPPL-EGWEPKPYYKCEHRLDL 269

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig12119.1342.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig12119.1342.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LFT6_ECTSI	1.750e-51	41.92	Similar to A-kinase anchoring protein 18 gamma n=1...	[more]
A0A6H5K2C7_9PHAE	3.340e-45	42.70	AKAP7_NLS domain-containing protein n=1 Tax=Ectoca...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019510	Protein kinase A anchor protein, nuclear localisation signal domain	PFAM	PF10469	AKAP7_NLS	coord: 87..345 e-value: 1.0E-16 score: 61.5
None	No IPR available	PANTHER	PTHR15934	FAMILY NOT NAMED	coord: 89..346
None	No IPR available	PANTHER	PTHR15934:SF2		coord: 89..346
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..36
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..21
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 29..36
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 37..376
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 22..28
None	No IPR available	TMHMM	TMhelix		coord: 25..47

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig12119	contig	H-paniculata_contig12119:360..3378 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig12119.1342.1	mRNA_H-paniculata_contig12119.1342.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig12119 2..3810 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig12119.1342.1 ID=prot_H-paniculata_contig12119.1342.1|Name=mRNA_H-paniculata_contig12119.1342.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=377bp
MHRQLMNNPRCISHMCMILRRCVAVVLFREICVALCSTIVTGTYSTFNTP
DIALTETGRVLFTVPTAAACVHVVMKQAHHTLRLLIMPQVAAVQHDIIAD
HAHLQDAAIPLQDLHLTLFVATLGEEDGSLKLAKETLEGCRDILQDHGLL
VCSALDGNEDEQPAEPVDNSAIEETTSNVRQSEKTGGHATRPSKTDSARS
NASVTSPPPTPTPLLLAFQGLGNFYSKVLYARLVEDDQASRFYSLASALH
SRFSQARLLEEASLPPTAASMSVTSNAGIGEKVGDVVEKKNKFVFEPHLT
IMKTSKLENRKTLMPPSSYIGHADSDFGSHVPTAVELSSMQDREETPDVP
EGFESRQYYKCEHRLALLPARHAIDR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR019510	Kinase-A_anchor_nucl_local_sig