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Homology
BLAST of mRNA_H-paniculata_contig12119.1342.1 vs. uniprot
Match: D8LFT6_ECTSI (Similar to A-kinase anchoring protein 18 gamma n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFT6_ECTSI) HSP 1 Score: 184 bits (466), Expect = 3.100e-49 Identity = 122/291 (41.92%), Postives = 167/291 (57.39%), Query Frame = 1
Query: 688 IMPQVAAVQHDIIADHAHLQDAAIPLQDLHLTLFVATLGEEDGSLKLAKETLEGCRDILQDHGLLVCSALDGNEDEQPAEPVDNSAIEETTSNVRQSEKTGGHATRPSKTDSARSNASVTSPPPTPTPLLLAFQGLGNFYSKVLYARLVEDDQASRFYSLASALHSRFSQARLLEEASLPPTAASMSVTSNAGIGEKVGDVVEKK--------NKFVFEPHLTIMKTSKLENRKTLMPPSSYIGHADSDF-GSHVPTAVELSSMQDREETPDVPEGFESRQYYKCEHRLAL 1533
I +++ +Q DI+A + HL DAAIP+Q HLTLFV TL E+DGSL+ A++TLE C D+L +HGL +D AE V + + + S +T S PL+L+F+ LG+F +K+L+A+LVED+QA+R LAS+LH RFS+A L+EEA+ P+ GEK GD + F F PHLTIMKTSKL +R TL+P SY + + G H P++VELSSM ++E+ P + EG+E R YYKCEHRL L
Sbjct: 55 IWAKISTIQGDILAGNQHLTDAAIPVQASHLTLFVLTLSEKDGSLQQARDTLEHCGDLLLEHGL--SPEVDLQASASRAESVPDDHMHPAALAIGDSNETAPGVAAAS-------------------PLMLSFRDLGHFRNKILFAKLVEDEQATRLRGLASSLHRRFSEAGLVEEAAGFPSRK----------GEKRGDXXXXXXXXXXXXXDSFEFTPHLTIMKTSKLRDRGTLIPADSYDRYQNGFVVGHHAPSSVELSSMLEKEDVPPL-EGWEPRPYYKCEHRLGL 313
BLAST of mRNA_H-paniculata_contig12119.1342.1 vs. uniprot
Match: A0A6H5K2C7_9PHAE (AKAP7_NLS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2C7_9PHAE) HSP 1 Score: 166 bits (420), Expect = 3.160e-43 Identity = 114/267 (42.70%), Postives = 151/267 (56.55%), Query Frame = 1
Query: 748 DAAIPLQDLHLTLFVATLGEEDGSLKLAKETLEGCRDILQDHGLLVCSALDGNEDEQPAEPVDNSAIEETTSNVRQSEKTGGHATRPSKTDSARSNASVTSPPPTPTPLLLAFQGLGNFYSKVLYARLVEDDQASRFYSLASALHSRFSQARLLEEASLPPTAASMSVTSNAGIGEKVGDVVE----KKNKFVFEPHLTIMKTSKLENRKTLMPPSSYIGHADSDF-GSHVPTAVELSSMQDREETPDVPEGFESRQYYKCEHRLAL 1533
DAAIP+Q HLTLFV L EEDGSL+ A++TLE C D+L +HGL +D E V + + + S +T AT S PL L+F+ LG+F +KVL+A+LVED+QA+R LAS+LH RFS+A L+E A+ P+ G K GD + + F F PHLTIMKTSKL +R TL+P SY + G H P++VELSSM ++E+ P + EG+E + YYKCEHRL L
Sbjct: 35 DAAIPVQASHLTLFVLRLSEEDGSLQQARDTLEHCGDLLLEHGL--SPEVDLPASASSTESVPDDGMHPAALGIGDSNETAPGATAAS-------------------PLTLSFRDLGHFRNKVLFAKLVEDEQATRLRGLASSLHQRFSEAGLVEGAAGFPSRK----------GGKRGDGGDGSGTSSDSFEFTPHLTIMKTSKLRDRGTLIPADSYDRYQSGFLVGHHAPSSVELSSMLEKEDVPPL-EGWEPKPYYKCEHRLDL 269
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 186.4 |
| Seed ortholog evalue | 2.4e-44 |
| Seed eggNOG ortholog | 2880.D8LFT6 |
| Preferred name | AKAP7 |
| KEGG ko | ko:K16524,ko:K18666 |
| Hectar predicted targeting category | signal anchor |
| GOs | GO:0000166,GO:0001508,GO:0003674,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005829,GO:0005886,GO:0006810,GO:0006811,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007178,GO:0008022,GO:0008104,GO:0008144,GO:0008150,GO:0009719,GO:0009966,GO:0009987,GO:0010033,GO:0010243,GO:0010646,GO:0010738,GO:0010959,GO:0012505,GO:0014070,GO:0014074,GO:0016020,GO:0016208,GO:0016324,GO:0016328,GO:0016528,GO:0016529,GO:0017076,GO:0019899,GO:0019900,GO:0019901,GO:0019904,GO:0022898,GO:0023051,GO:0023052,GO:0030133,GO:0030315,GO:0030554,GO:0031410,GO:0031982,GO:0032409,GO:0032411,GO:0032412,GO:0032414,GO:0032553,GO:0032555,GO:0032559,GO:0032879,GO:0032947,GO:0032991,GO:0033036,GO:0034237,GO:0034762,GO:0034764,GO:0034765,GO:0034767,GO:0035556,GO:0036094,GO:0042221,GO:0042383,GO:0042391,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043266,GO:0043268,GO:0043269,GO:0043270,GO:0044093,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045177,GO:0046683,GO:0048518,GO:0048522,GO:0048583,GO:0050789,GO:0050794,GO:0050896,GO:0051018,GO:0051049,GO:0051050,GO:0051179,GO:0051234,GO:0051591,GO:0051716,GO:0060306,GO:0065007,GO:0065008,GO:0065009,GO:0070382,GO:0070887,GO:0071310,GO:0071320,GO:0071407,GO:0071417,GO:0071495,GO:0071944,GO:0097159,GO:0097367,GO:0097708,GO:0098590,GO:0099053,GO:0099503,GO:1901016,GO:1901018,GO:1901265,GO:1901363,GO:1901379,GO:1901381,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902259,GO:1902261,GO:1902531,GO:1903818,GO:1904062,GO:1904064,GO:2001257,GO:2001259 |
| EggNOG free text desc. | positive regulation of delayed rectifier potassium channel activity |
| EggNOG OGs | KOG2814@1,KOG2814@2759 |
| COG Functional cat. | L |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000 |
| Exons | 2 |
| Model size | 1921 |
| Cds size | 1131 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig12119.1342.1 >prot_H-paniculata_contig12119.1342.1 ID=prot_H-paniculata_contig12119.1342.1|Name=mRNA_H-paniculata_contig12119.1342.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=377bp
MHRQLMNNPRCISHMCMILRRCVAVVLFREICVALCSTIVTGTYSTFNTP
DIALTETGRVLFTVPTAAACVHVVMKQAHHTLRLLIMPQVAAVQHDIIAD
HAHLQDAAIPLQDLHLTLFVATLGEEDGSLKLAKETLEGCRDILQDHGLL
VCSALDGNEDEQPAEPVDNSAIEETTSNVRQSEKTGGHATRPSKTDSARS
NASVTSPPPTPTPLLLAFQGLGNFYSKVLYARLVEDDQASRFYSLASALH
SRFSQARLLEEASLPPTAASMSVTSNAGIGEKVGDVVEKKNKFVFEPHLT
IMKTSKLENRKTLMPPSSYIGHADSDFGSHVPTAVELSSMQDREETPDVP
EGFESRQYYKCEHRLALLPARHAIDR* back to topmRNA from alignment at H-paniculata_contig12119:2..3810- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig12119.1342.1 ID=mRNA_H-paniculata_contig12119.1342.1|Name=mRNA_H-paniculata_contig12119.1342.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3809bp|location=Sequence derived from alignment at H-paniculata_contig12119:2..3810- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGGAAACATCGCGAGACAAGTGCTGGATATTTTAGCCTCGTACGGACCA
GTCTTTGTCAGGAACCATCGAATTGGGTTCTGCTTCGACCGGCATGGCGG
CAAACAATCAAAGTGTCCAACCCGTACATCCTGGTCATCGTGATACGTCG
GCTGAGGGACGGTGGAGCCGGAAACAATCTGGGAAGAAAATAACAGGCCG
GGCCAGCACTAGAAAAAGACCTCGGCCCACTCACTTCTTGTCCGTCCGTA
TCAATAACCCGCTTATATGGGAAAAGGTATATGAACTACAAGGCGTGATT
GCTACGGTGTTTAGTAATATTTCCTCAAAAACTGTGCAGCTCGCGTTTGA
ATCAGTCTCGTGTAAAATTGCGTCTCAACACCTTTTCCGTCACGAACATG
TACGCAAGAGGTAAACATGCGTTCGCGCCTTGATGCACCGTCAGTTGATG
AACAACCCACGCTGCATCAGTCACATGTGCATGATCTTGAGACGATGTGT
TGCCGTCGTTCTGTTTAGAGAAATATGTGTGGCCCTGTGCTCAACGATCG
TGACGGGAACATATTCCACGTTCAACACACCAGACATTGCACTTACAGAA
ACCGGCCGGGTTCTCTTCACCGTGCCTACCGCGGCAGCTTGCGTTCATGT
AGTGATGAAACAAGCTCATCACACTTTACGTCTGTTGATAATGCCACAGG
TGGCGGCCGTACAGCATGATATCATCGCGGACCATGCGCACCTACAGGAT
GCAGCAATACCCCTTCAGGACCTGCACCTCACTCTATTTGTCGCCACGTT
GGGTGAAGAAGATGGCAGCCTAAAGGTGCAGCAATTCGATGCGTACTAGT
ACGCTAAGGACCACATATACCAACTAGGGCTGTACAACACCAGTCCTTGA
AACCTGTCGACACACTGAATTCATGTCAAGAAATCAGGCCTCTCCACCAT
AATAAACGCGGTGGCAACTCACGCAAAACGTCATCTAAAGAGCCCAATAG
AATAGATGAAAACACAAATAATTGAACCACACTAACATGTTCCCAAGGCC
GTCGCACACACCCCCGATCAGGGCTGCACTTGGAGGCGAGCGAATAGCTG
GGGGTCGAAACCTCACAAAAAGCGAAGGCTCAATGGGGAAATTGGGGAAA
AGTGGGAAGGATAATAACGGTAACAGGTCAGTCTCGATTCACCAAAAAAT
TTCATGCTACCTCATTCGACATATCGTTGCGTATTCCACAGATATATATA
TATGTTCAGCACTCTACAAAAATCCTTCACGTTAGAAAGGTTAGGTGAAC
CATTTCAATGCTCATCATGCTATTTTCCAAACCAGCGCACACACAAGACT
TTATCCCTTTATAAATCACCAATAAAACTAGAAGTGAGACAGAACACATT
GAACAAACACAGATTTAGTTACCCATGCCATTTCAGAATATAAACCGGGA
GAATATATTCATCACAGAAACAGTTCTGTTGTGTCCTTTTTATGTTCGAC
ATTGACCGGTACAGTCAGACATGGTGTCGGGCAGTGGCAGCATAAACCCT
ACATCAATTGCACGGGCAGAAGATATAGTAGTGCCATTGCAGAAGCAAGC
CTACCGATTAACGCAACCCAAAACGTCCTACGAATTAGCCAGTTCATCGT
GACAAAACACGAAGTAATCATAACACGAATGCCATCTGTAAATTCAGGCA
ATCCGAAACATCAAACATAGCGTTACCACGGGTACAGACAGTACAGGAAA
ACAAAACACTGACACACAACTCGACATGCCAGGCATTACTTGCCCCTATC
CACGGTAGCAATTCTTGTCACAAGCAAAACGGAGATGGGCATAGACTCGT
CTATTTCCACCGCAGTGGTGCTCATAGCATCGACCGCCGCAGGCGCTTGT
CTCCCTTCAACAGGCGCGATTTCGTAAGCAGGCATGAACCTCCCCGTCCT
GTTCAGACGGTCTTCTCACCTGGCTGAACCTACAGTCAGTAGGAGGATGC
AAGCTCATACCGGAGTCCATTCTTCCACCATCGTCCAACCCTTGACTCGA
GAAGCAATCTAACGTTGCCCCTGTCCATTCTCATGAATGTGTCTCCATCG
TAGGTTGGAGAGTCTTGACCTCCGGTATGGCTACCATTGCCGTCCTCTGA
CATCTGGATGGAGCTCCCAGTAGGTAACACTAGTGTACTCGATACTTCAT
AGGCCTCTGACGCCTATCGATCTCTGGACCAACAAAGAGGATTTTCCATT
ACTTCTTTGTTACAAGTCCCATTCAGGGAAGCAAGTTTAAATGACAGCGT
AGGCCTCACCCAGCAAAACTAAGGCTGGGGCTGTAGCCAACAACTCCTAC
AGTCATAGTCCAGAATCCGAACCAGATAATGACCAACGCAAGACCAGATC
ATCTTCAGTCAACGGCAGATTAAGTACAATAAAACATTGCCAATATCGGT
ACAGCAGTCTTTCGCGGTCCAGTAAAAACCTACGCTTGTTGGGCTATTCT
TCGTACCCGAATCTAGGGATCCAGGTGGGAAAACTACCCCATAATATCGG
ACAAAAACAGCCAGCTATTTTACCTGCATAAGCGGTCGGCTTCGCGTAAG
TACGCATTGTTGCATGCTTTTGACCTGTGTTGACGTCTACTACGGATTGC
CTTGCGTGTCTGCGACACATCCGCTGCCGCCGCTGCCACCACCGCCTCCG
CCTTTCCTCGCAGCTAGCAAAAGAGACGCTGGAAGGCTGTCGTGATATTC
TACAGGATCACGGATTGCTCGTGTGTTCTGCCCTCGACGGTAATGAAGAC
GAACAACCGGCCGAACCCGTTGACAACAGTGCGATCGAAGAGACGACCTC
CAACGTCAGGCAAAGCGAAAAAACTGGCGGTCACGCCACGCGGCCGAGTA
AAACCGATTCAGCAAGATCGAATGCATCGGTGACGTCACCACCACCGACA
CCGACACCCCTGCTGTTGGCGTTTCAAGGGCTGGGAAATTTCTACAGCAA
GGTTTTGTACGCCCGCCTCGTGGAGGATGACCAAGCTTCTAGATTTTACA
GTCTCGCCTCTGCGCTTCACAGCCGTTTTTCACAAGCGCGGCTGTTAGAG
GAAGCATCACTACCACCAACAGCCGCTAGCATGAGTGTTACAAGCAATGC
GGGCATTGGTGAAAAGGTCGGCGATGTTGTCGAAAAGAAGAACAAGTTTG
TGTTCGAGCCGCACCTGACAATAATGAAGACCTCCAAATTGGAGAATCGG
AAAACTTTAATGCCTCCCAGCTCTTACATAGGGCATGCCGACTCCGATTT
TGGTAGCCACGTTCCAACGGCAGTGGAGTTGTCGAGCATGCAAGACAGGG
AAGAAACGCCCGACGTGCCCGAGGGTTTCGAGTCTCGGCAGTATTACAAA
TGTGAGCACAGATTAGCTTTGCTGCCTGCCCGGCACGCGATTGATCGTTA
AAGTCTCGCGTAGGGGAATCGAGCGGATCTGAGATATACCTTGGACTCCA
ACTGACGAGAAGAGCCCTCGATGGCACCTATCGACAGCGCTTGTTCGAGT
TCTTTGCTGTTGAAAGCTGGCACGGCTTCTCCCTTTGACTCTTCTCCCTG
GAGTCTAGGCGTGCGTTGAAACAAGATGATGTTTTTTTATTTTATTATAA
TATTAATCTCGTCTTGCCCTCTGTGGCCGCAGCTGGGTGTACAGTATTAG
GTCCACGGACCTACGCCCGAACGGGTAGGGTAGCTCGTATACTGAGCATA
ACTGGAAGTCTAGTCAGAGGTTTCTAGTGGGTGCAACACCCACACTGCCT
ACCTGGTTC back to topCoding sequence (CDS) from alignment at H-paniculata_contig12119:2..3810- >mRNA_H-paniculata_contig12119.1342.1 ID=mRNA_H-paniculata_contig12119.1342.1|Name=mRNA_H-paniculata_contig12119.1342.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2262bp|location=Sequence derived from alignment at H-paniculata_contig12119:2..3810- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCACCGTCAGTTGATGAACAACCCACGCTGCATCAGTCACATGTGCAT
GATCTTGAGACGATGTGTTGCCGTCGTTCTGTTTAGAGAAATATGTGTGG
CCCTGTGCTCAACGATCGTGACGGGAACATATTCCACGTTCAACACACCA
GACATTGCACTTACAGAAACCGGCCGGGTTCTCTTCACCGTGCCTACCGC
GGCAGCTTGCGTTCATGTAGTGATGAAACAAGCTCATCACACTTTACGTC
TGTTGATAATGCCACAGGTGGCGGCCGTACAGCATGATATCATCGCGGAC
CATGCGCACCTACAGGATGCAGCAATACCCCTTCAGGACCTGCACCTCAC
TCTATTTGTCGCCACGTTGGGTGAAGAAGATGGCAGCCTAAAGATGCACC
GTCAGTTGATGAACAACCCACGCTGCATCAGTCACATGTGCATGATCTTG
AGACGATGTGTTGCCGTCGTTCTGTTTAGAGAAATATGTGTGGCCCTGTG
CTCAACGATCGTGACGGGAACATATTCCACGTTCAACACACCAGACATTG
CACTTACAGAAACCGGCCGGGTTCTCTTCACCGTGCCTACCGCGGCAGCT
TGCGTTCATGTAGTGATGAAACAAGCTCATCACACTTTACGTCTGTTGAT
AATGCCACAGGTGGCGGCCGTACAGCATGATATCATCGCGGACCATGCGC
ACCTACAGGATGCAGCAATACCCCTTCAGGACCTGCACCTCACTCTATTT
GTCGCCACGTTGGGTGAAGAAGATGGCAGCCTAAAGCTAGCAAAAGAGAC
GCTGGAAGGCTGTCGTGATATTCTACAGGATCACGGATTGCTCGTGTGTT
CTGCCCTCGACGGTAATGAAGACGAACAACCGGCCGAACCCGTTGACAAC
AGTGCGATCGAAGAGACGACCTCCAACGTCAGGCAAAGCGAAAAAACTGG
CGGTCACGCCACGCGGCCGAGTAAAACCGATTCAGCAAGATCGAATGCAT
CGGTGACGTCACCACCACCGACACCGACACCCCTGCTGTTGGCGTTTCAA
GGGCTGGGAAATTTCTACAGCAAGGTTTTGTACGCCCGCCTCGTGGAGGA
TGACCAAGCTTCTAGATTTTACAGTCTCGCCTCTGCGCTTCACAGCCGTT
TTTCACAAGCGCGGCTGTTAGAGGAAGCATCACTACCACCAACAGCCGCT
AGCATGAGTGTTACAAGCAATGCGGGCATTGGTGAAAAGGTCGGCGATGT
TGTCGAAAAGAAGAACAAGTTTGTGTTCGAGCCGCACCTGACAATAATGA
AGACCTCCAAATTGGAGAATCGGAAAACTTTAATGCCTCCCAGCTCTTAC
ATAGGGCATGCCGACTCCGATTTTGGTAGCCACGTTCCAACGGCAGTGGA
GTTGTCGAGCATGCAAGACAGGGAAGAAACGCCCGACGTGCCCGAGGGTT
TCGAGTCTCGGCAGTATTACAAATGTGAGCACAGATTAGCTTTGCTGCCT
GCCCGGCACGCGATTGATCGTTAACTAGCAAAAGAGACGCTGGAAGGCTG
TCGTGATATTCTACAGGATCACGGATTGCTCGTGTGTTCTGCCCTCGACG
GTAATGAAGACGAACAACCGGCCGAACCCGTTGACAACAGTGCGATCGAA
GAGACGACCTCCAACGTCAGGCAAAGCGAAAAAACTGGCGGTCACGCCAC
GCGGCCGAGTAAAACCGATTCAGCAAGATCGAATGCATCGGTGACGTCAC
CACCACCGACACCGACACCCCTGCTGTTGGCGTTTCAAGGGCTGGGAAAT
TTCTACAGCAAGGTTTTGTACGCCCGCCTCGTGGAGGATGACCAAGCTTC
TAGATTTTACAGTCTCGCCTCTGCGCTTCACAGCCGTTTTTCACAAGCGC
GGCTGTTAGAGGAAGCATCACTACCACCAACAGCCGCTAGCATGAGTGTT
ACAAGCAATGCGGGCATTGGTGAAAAGGTCGGCGATGTTGTCGAAAAGAA
GAACAAGTTTGTGTTCGAGCCGCACCTGACAATAATGAAGACCTCCAAAT
TGGAGAATCGGAAAACTTTAATGCCTCCCAGCTCTTACATAGGGCATGCC
GACTCCGATTTTGGTAGCCACGTTCCAACGGCAGTGGAGTTGTCGAGCAT
GCAAGACAGGGAAGAAACGCCCGACGTGCCCGAGGGTTTCGAGTCTCGGC
AGTATTACAAATGTGAGCACAGATTAGCTTTGCTGCCTGCCCGGCACGCG
ATTGATCGTTAA back to top
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