prot_H-paniculata_contig121.1327.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig121.1327.1
Unique Nameprot_H-paniculata_contig121.1327.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length264
Homology
BLAST of mRNA_H-paniculata_contig121.1327.1 vs. uniprot
Match: A0A6H5KZG2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZG2_9PHAE)

HSP 1 Score: 147 bits (370), Expect = 2.780e-36
Identity = 111/252 (44.05%), Postives = 142/252 (56.35%), Query Frame = 0
Query:    1 GSPEALVGRLYAGRGLQDHLTHSSPPRNTPFGTTSPHRQDPMRENNQDAKKNGSTNNLSSPMGEVSGVLRSHATIPRDALVAFPSHGNTSGLPSKCEQDIMVLRLRQQGHSSSMGLSPSR---SQPSVLPNSPPHIGVRRRTSGESRSEPSFAAGERLEARTSEGAAGXXXXXXXXXXXQANACMTAIGGGMSLSRSLGVLGQSGTAKPLTVAIVNTKDDGAPYLRSERMSPKSVVRRSRALSPVGYSPSRE 249
            GSP+ALVGRLYAG G Q  L  +SPPRNT FGTT+ H Q   RE+  D       +N++SP+  VSG++RS A     A     +  ++  L  + + D +V RL    H SS    P     SQ     NSPP IGVR R SG + ++   +AG R  +  S  AA             A+    ++GGGM LSRSLG LGQ+G  +  T+AIVNT+DDGA YLRSE+MSPKS +R  R LS +  SP RE
Sbjct:   47 GSPDALVGRLYAGPGRQQRLAENSPPRNTSFGTTTVHNQ--YREDVGDVG-----DNVASPVRGVSGLIRSRA-----AAATVATSFDSDSLAEQQQSDALVPRLIH--HQSSEASPPGNGGCSQREDGINSPPRIGVRNRPSGGNATKRMRSAGSRRSSGGSVAAA--RYQPQKQGPSAAHQQQPSVGGGMMLSRSLGALGQAGAGRS-TLAIVNTRDDGASYLRSEKMSPKSSLRAGRGLSSIRSSPGRE 281          
BLAST of mRNA_H-paniculata_contig121.1327.1 vs. uniprot
Match: D8LK16_ECTSI (Dynein heavy chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK16_ECTSI)

HSP 1 Score: 145 bits (366), Expect = 9.660e-36
Identity = 115/257 (44.75%), Postives = 146/257 (56.81%), Query Frame = 0
Query:    1 GSPEALVGRLYAGRGLQDHLTHSSPPRNTPFGTTSPHRQDPMRENNQDAKKNGSTNNLSSPMGEVSGVLRSHATIPRDALVAFPSHGNTSGLPSKCEQDIMVLRL--RQQGHSSSMGLSPSRSQPSVLPNSPPHIGVRRRTSGESRSEPSFAAGERLEARTSEGAAGXXXXXXXXXXXQA-NACMTAIGGGMSLSRSLGVLGQSGTAKPLTVAIVNTKDDGAPYLRSERMSPKSVVRRSRALSPVGYSPSRERYQEG 254
            GSP+ALVGRLYAG G Q  L  +SPPRNT FGTT+ H Q       QD    G  +N++SP+G VSG++RS     R A     +  +   L  + + D +V RL   Q   +S  G +   SQ     NSPP IGVR R+SG + ++    AG R   R+S G+  XX          A      ++GG M LSRSLG LGQ+G A   T+AIVNT+DDGAPYLRS++MSPKS +R  R LS +  SP RE   EG
Sbjct:   47 GSPDALVGRLYAGPGRQQRLAENSPPRNTSFGTTTVHNQ-----YRQDVGDVG--DNVASPVGGVSGLIRS-----RVAAATAATSFDRDSLAEQQQSDALVPRLIHHQPSEASPPG-NDGGSQRGDGINSPPRIGVRNRSSGGNAAKRVRGAGSR---RSSGGSVXXXGNQPQKQGPSAARQQQPSVGGRMMLSRSLGALGQAG-AGTSTLAIVNTRDDGAPYLRSDKMSPKSSLRAGRGLSSIRSSPGREPLSEG 286          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig121.1327.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KZG2_9PHAE2.780e-3644.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LK16_ECTSI9.660e-3644.75Dynein heavy chain n=1 Tax=Ectocarpus siliculosus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig121contigH-paniculata_contig121:183..1266 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig121.1327.1mRNA_H-paniculata_contig121.1327.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig121 183..1267 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig121.1327.1 ID=prot_H-paniculata_contig121.1327.1|Name=mRNA_H-paniculata_contig121.1327.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=264bp
GSPEALVGRLYAGRGLQDHLTHSSPPRNTPFGTTSPHRQDPMRENNQDAK
KNGSTNNLSSPMGEVSGVLRSHATIPRDALVAFPSHGNTSGLPSKCEQDI
MVLRLRQQGHSSSMGLSPSRSQPSVLPNSPPHIGVRRRTSGESRSEPSFA
AGERLEARTSEGAAGGAAGRRASRRAQANACMTAIGGGMSLSRSLGVLGQ
SGTAKPLTVAIVNTKDDGAPYLRSERMSPKSVVRRSRALSPVGYSPSRER
YQEGPGPMLSHSVS
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