prot_H-paniculata_contig12078.1314.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig12078.1314.1 vs. uniprot
Match: Q9LH44_ARATH (Copia-like retrotransposable element n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=Q9LH44_ARATH) HSP 1 Score: 73.9 bits (180), Expect = 3.230e-13 Identity = 40/102 (39.22%), Postives = 61/102 (59.80%), Query Frame = 0 Query: 2 GVCSACEKGKASKQPVKNYREERTTEPLELVNTDIAG-LGDKSFGGCR-FAIFVDDYGKMRIVDTLRQKSEALWALKQFERDVPRANSLRIKRLRSDQGGEY 101 G+C+ACE GK S++ + T + LEL+++D+ G + +S G R F F+DD+ +M V L+ KSE + K F+ V + RIKRLR+D GGE+ Sbjct: 489 GICAACEMGKQSRRSFPKKSQSNTNKTLELIHSDVCGPMQTESINGSRYFLTFIDDFSRMTWVYFLKNKSEVITKFKIFKPYVENQSESRIKRLRTDGGGEF 590
BLAST of mRNA_H-paniculata_contig12078.1314.1 vs. uniprot
Match: A0A830BAC2_9LAMI (Retrovirus-related pol polyprotein from transposon tnt 1-94 n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830BAC2_9LAMI) HSP 1 Score: 72.4 bits (176), Expect = 1.060e-12 Identity = 43/103 (41.75%), Postives = 56/103 (54.37%), Query Frame = 0 Query: 1 LGVCSACEKGKASKQPVKNYREERTTEPLELVNTDIAG-LGDKSFGGCR-FAIFVDDYGKMRIVDTLRQKSEALWALKQFERDVPRANSLRIKRLRSDQGGEY 101 LG C +C KGK +K P K E R L+L++TD+ G L + GG F F DDY + V ++ KSE K F +V RIK+LRSD+GGEY Sbjct: 383 LGTCESCLKGKMTKSPYKGQME-RAEGLLDLIHTDVCGPLSVSARGGYSYFVTFTDDYSRYGFVYLMKYKSETFERFKDFRHEVENQLGRRIKKLRSDRGGEY 484
BLAST of mRNA_H-paniculata_contig12078.1314.1 vs. uniprot
Match: Q6L3X6_SOLDE (Polyprotein, putative n=1 Tax=Solanum demissum TaxID=50514 RepID=Q6L3X6_SOLDE) HSP 1 Score: 72.0 bits (175), Expect = 1.540e-12 Identity = 41/101 (40.59%), Postives = 58/101 (57.43%), Query Frame = 0 Query: 3 VCSACEKGKASKQPVKNYREERTTEPLELVNTDIAG--LGDKSFGGCRFAIFVDDYGKMRIVDTLRQKSEALWALKQFERDVPRANSLRIKRLRSDQGGEY 101 VC C++GK +K P + + R + L+L++TD+ G D G F +F+DDY +M V +R KSE KQF+ V +LRIK LRSD GGE+ Sbjct: 602 VCETCQQGKQTKLPFQANQVWRANQKLQLIHTDVCGPIKTDSLSGNKYFLLFIDDYTRMCWVYFIRLKSEVFDVFKQFKALVENQCNLRIKALRSDNGGEH 702
BLAST of mRNA_H-paniculata_contig12078.1314.1 vs. uniprot
Match: A0A151S1T9_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Cajanus cajan TaxID=3821 RepID=A0A151S1T9_CAJCA) HSP 1 Score: 70.9 bits (172), Expect = 1.870e-12 Identity = 42/103 (40.78%), Postives = 60/103 (58.25%), Query Frame = 0 Query: 1 LGVCSACEKGKASKQPVKNYREERTTEPLELVNTDIAG-LGDKSFGGCR-FAIFVDDYGKMRIVDTLRQKSEALWALKQFERDVPRANSLRIKRLRSDQGGEY 101 L CS C GK ++ K + R +E L+LV++D+ G L KSF G F IF+DD + V TL++K + L KQF V R + ++KR+R+D GGEY Sbjct: 160 LEKCSHCMAGKQTRVSFKKHPPSRKSELLQLVHSDVCGPLKVKSFSGALYFVIFIDDCSRKLWVYTLQRKDQVLERFKQFHALVERQSGKKLKRIRTDNGGEY 262
BLAST of mRNA_H-paniculata_contig12078.1314.1 vs. uniprot
Match: A0A830CQX7_9LAMI (Retrovirus-related pol polyprotein from transposon tnt 1-94 n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830CQX7_9LAMI) HSP 1 Score: 70.5 bits (171), Expect = 5.110e-12 Identity = 41/103 (39.81%), Postives = 56/103 (54.37%), Query Frame = 0 Query: 1 LGVCSACEKGKASKQPVKNYREERTTEPLELVNTDIAG-LGDKSFGGCR-FAIFVDDYGKMRIVDTLRQKSEALWALKQFERDVPRANSLRIKRLRSDQGGEY 101 LG C +C KGK +K P K + R L+L++TD+ G L + GG F F DDY + V ++ KSE K F ++ RIK+LRSD+GGEY Sbjct: 383 LGTCESCLKGKMTKSPFKGQMK-RAEGLLDLIHTDVCGPLSVSARGGYSYFVTFTDDYSRYGFVYLMKYKSETFERFKDFRHEIENQLGRRIKKLRSDRGGEY 484
BLAST of mRNA_H-paniculata_contig12078.1314.1 vs. uniprot
Match: A0A830BU05_9LAMI (Retrovirus-related pol polyprotein from transposon tnt 1-94 n=4 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830BU05_9LAMI) HSP 1 Score: 70.5 bits (171), Expect = 5.150e-12 Identity = 43/103 (41.75%), Postives = 55/103 (53.40%), Query Frame = 0 Query: 1 LGVCSACEKGKASKQPVKNYREERTTEPLELVNTDIAG-LGDKSFGGCR-FAIFVDDYGKMRIVDTLRQKSEALWALKQFERDVPRANSLRIKRLRSDQGGEY 101 LG C +C KGK +K P K E R L+L++TD G L + GG F F DDY + V ++ KSE K F +V RIK+LRSD+GGEY Sbjct: 457 LGTCESCLKGKMTKSPYKGQME-RAKGLLDLIHTDXCGPLSVSARGGYSYFXXFTDDYSRYGFVYLMKYKSETFERFKDFRHEVENQLGRRIKKLRSDRGGEY 558
BLAST of mRNA_H-paniculata_contig12078.1314.1 vs. uniprot
Match: A0A6S7H8C9_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7H8C9_PARCT) HSP 1 Score: 70.1 bits (170), Expect = 7.090e-12 Identity = 37/100 (37.00%), Postives = 56/100 (56.00%), Query Frame = 0 Query: 4 CSACEKGKASKQPVKNYREERTTEPLELVNTDIAG-LGDKSFGGCRFAI-FVDDYGKMRIVDTLRQKSEALWALKQFERDVPRANSLRIKRLRSDQGGEY 101 C AC + K + PV RTT+PLEL+++D+ G + S GG ++ + F DDY + V L+ KSE +++ V L++K LR+D GGEY Sbjct: 12 CEACTRAKMHRIPVPKQSSNRTTQPLELIHSDVCGPMNTDSIGGSKYILTFTDDYTRYVTVYFLKNKSEVYEKFQEYVSMVENFTGLKVKTLRTDNGGEY 111
BLAST of mRNA_H-paniculata_contig12078.1314.1 vs. uniprot
Match: A0A7D9DPP1_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=4 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9DPP1_PARCT) HSP 1 Score: 70.1 bits (170), Expect = 7.220e-12 Identity = 37/100 (37.00%), Postives = 56/100 (56.00%), Query Frame = 0 Query: 4 CSACEKGKASKQPVKNYREERTTEPLELVNTDIAG-LGDKSFGGCRFAI-FVDDYGKMRIVDTLRQKSEALWALKQFERDVPRANSLRIKRLRSDQGGEY 101 C AC + K + PV RTT+PLEL+++D+ G + S GG ++ + F DDY + V L+ KSE +++ V L++K LR+D GGEY Sbjct: 409 CEACTRAKMHRIPVPKQSSNRTTQPLELIHSDVCGPMNTDSIGGSKYILTFTDDYTRYVTVYFLKNKSEVYEKFQEYVSMVENFTGLKVKTLRTDNGGEY 508
BLAST of mRNA_H-paniculata_contig12078.1314.1 vs. uniprot
Match: A0A6A3V0L6_9STRA (Integrase catalytic domain-containing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3V0L6_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 8.500e-12 Identity = 38/106 (35.85%), Postives = 63/106 (59.43%), Query Frame = 0 Query: 3 VCSACEKGKA-----SKQPVKNYREERTTEPLELVNTDIAG-LGDKSFGGCRFAI-FVDDYGKMRIVDTLRQKSEALWALKQFERDVPRANSLRIKRLRSDQGGEY 101 VC+ C GK S+ P K + + L+L+++D+ G + K+ GGC +A+ F+DD+ + V +++K+E L K+F+ D+ A +IKR+RSD GGEY Sbjct: 16 VCAGCCMGKMREDNFSRSPEKTVK---SAGVLDLIHSDVMGPMQTKTPGGCTYAVTFIDDFSRHVTVHFMKKKAEVLEKFKKFKADMENATGRKIKRIRSDNGGEY 118
BLAST of mRNA_H-paniculata_contig12078.1314.1 vs. uniprot
Match: A0A4Q3F441_9SPHI (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Sphingobacteriaceae bacterium TaxID=2021370 RepID=A0A4Q3F441_9SPHI) HSP 1 Score: 69.7 bits (169), Expect = 9.740e-12 Identity = 36/102 (35.29%), Postives = 57/102 (55.88%), Query Frame = 0 Query: 1 LGVCSACEKGKASKQPVKNYREERTTEPLELVNTDIAGLGDKSFGGCRFAI-FVDDYGKMRIVDTLRQKSEALWALKQFERDVPRANSLRIKRLRSDQGGEY 101 + C C KGK + P E ++TEPL+L+++D+ S+GG R+ + FVDD+ + V L+ KSE F+ + L+IK++R+D GGEY Sbjct: 97 IAKCEVCAKGKQCRTPFSKS-ETKSTEPLQLIHSDLMENKKPSYGGARYLLTFVDDFSRKVFVYFLKNKSEVFDTFIGFKNTIENQTGLKIKKMRTDNGGEY 197 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12078.1314.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig12078.1314.1 ID=prot_H-paniculata_contig12078.1314.1|Name=mRNA_H-paniculata_contig12078.1314.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=101bpback to top |