prot_H-paniculata_contig12023.1294.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig12023.1294.1
Unique Nameprot_H-paniculata_contig12023.1294.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length308
Homology
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BLAST of mRNA_H-paniculata_contig12023.1294.1 vs. uniprot
Match: D7G6E2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6E2_ECTSI)

HSP 1 Score: 319 bits (817), Expect = 7.280e-104
Identity = 192/318 (60.38%), Postives = 230/318 (72.33%), Query Frame = 0 
Query:    1 SQLFQGKVLEAVESCSRAVELCEQDEDSTPDTDALGQALRQLGATQMLLDGAMDDAETSLLRAARLGSSGADQGKGLSVLAAFNASTGDDHRIEEAVDLWNEARATTKAAVKGLGATSDSPDSVQAGGDIGNDSAAIS-------LSHASVLCSAAQGDLLLGRGTAKASEILTEALKIRNKLLPPNHPATAWTLALLGRCHVIAGEAVTAEGLLRAALDGFKTVGGEEGSANSISNVAGRAPVAAG----PLLFSSPLHPFSKANALRAFSELLMNWEKRESEGGQVQRQAEQVESSLRLKPPGRITMHMLHLDDMY 307
            +QLFQGK+  AVE+ SRAV+LC+QDED+TPDTDALGQALRQLG  Q+L  G  DDAETSLLRAARLGS+ ADQGKGL+ +AAFN + GD+  +EEAV+L NEA ATT  + +    T+         G   ND+AA +       L+HASVL +AAQG+L+L RGTA ASE L EALKIR +LLP  HPATAWTL+LL RCHV AGEAVTAEGL RAALD        +G A  + +   R   +AG    PLLF+SPLHP +KA  LR +SELL+ WEKRE+EG  V RQAE+VESSL LKPP  +T+HMLHLDD+Y
Sbjct:  117 AQLFQGKIPVAVETSSRAVDLCQQDEDNTPDTDALGQALRQLGVIQVL-SGEEDDAETSLLRAARLGSTSADQGKGLAAVAAFNIARGDEQSVEEAVELLNEACATTSESDEHKEPTAXXXXXXXXXGGXXNDAAASAATSKVARLAHASVLSTAAQGELVLERGTATASERLGEALKIREQLLPIGHPATAWTLSLLARCHVAAGEAVTAEGLFRAALDSL------QGIAEEVDDGIARRQRSAGTVALPLLFASPLHPHTKAATLRGYSELLLQWEKREAEGEVVARQAEKVESSLLLKPPVGLTLHMLHLDDVY 427
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BLAST of mRNA_H-paniculata_contig12023.1294.1 vs. uniprot
Match: A0A835ZDH7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDH7_9STRA)

HSP 1 Score: 140 bits (352), Expect = 3.320e-35
Identity = 122/335 (36.42%), Postives = 165/335 (49.25%), Query Frame = 0 
Query:    1 SQLFQGKVLEAVESCSRAVELCEQD-EDSTPDTDALGQALRQLGATQMLLDGAMDDAETSLLRAARLGSSGADQGKG-----------------LSVLAAFNAS--TGDDHRIEEAVDLWNEARATTKAAVKGLGATSDSPDSVQAGGDIGNDSAAISLSHASVLCSAAQGDLLLGRG------------TAKASEILTEALKIRNKLLPPNHPATAWTLALLGRCHVIAGEAVTAEGLLRAALDGFKTVGGEEGSANSISNVAGRAPVAAGPLLFSSPLHPFSKANALRAFSELLMNWEKRESEGGQVQRQAEQVESSLRLKPPGRITMHMLHL 303
            +QLFQGK+  A  +C+ AV  CE     +TPDT ALG ALR LG  Q LL G  D AETSLLRAARL    ADQ K                  LS LAA++ S  T + HR  +A++ W EA +   AA           D+  A          +  +HA  L + A+  L    G            T + S  L EALK+  + +  N P   W LA L RC  +AG AVTAEGL R+A++                +V G+  +A  P    SP + F     L  +S+LL+ WEKRE+ G ++Q++A+ +E+ L LK P R+++ MLHL
Sbjct:   58 AQLFQGKLAAAAATCADAVRACEDGVSGATPDTAALGNALRSLGVVQ-LLRGDGDAAETSLLRAARLSDGAADQAKARIARQGPAVARVLVVCALSSLAAYSMSIETAEGHR--DALEYWQEAVSVLTAA-----------DAQAAASACAKTKRELQETHAITLTNLAEAALTGAPGPYETAGAGGKADTERPSAHLREALKLSEQSMGHNDPYLGWVLAQLARCCHLAGSAVTAEGLFRSAMEKMDP-----------EDVRGKQALAMHP----SPANIFLLQGTLSMYSQLLLQWEKREAVGRKMQQRAQDLEAGLPLKLPPRVSLPMLHL 363
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12023.1294.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G6E2_ECTSI7.280e-10460.38Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZDH7_9STRA3.320e-3536.42Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 132..235
e-value: 3.5E-11
score: 44.7
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 3..214
NoneNo IPR availablePFAMPF13424TPR_12coord: 153..216
e-value: 4.5E-9
score: 36.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig12023contigH-paniculata_contig12023:5089..7576 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig12023.1294.1mRNA_H-paniculata_contig12023.1294.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig12023 5089..7576 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig12023.1294.1 ID=prot_H-paniculata_contig12023.1294.1|Name=mRNA_H-paniculata_contig12023.1294.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=308bp
SQLFQGKVLEAVESCSRAVELCEQDEDSTPDTDALGQALRQLGATQMLLD
GAMDDAETSLLRAARLGSSGADQGKGLSVLAAFNASTGDDHRIEEAVDLW
NEARATTKAAVKGLGATSDSPDSVQAGGDIGNDSAAISLSHASVLCSAAQ
GDLLLGRGTAKASEILTEALKIRNKLLPPNHPATAWTLALLGRCHVIAGE
AVTAEGLLRAALDGFKTVGGEEGSANSISNVAGRAPVAAGPLLFSSPLHP
FSKANALRAFSELLMNWEKRESEGGQVQRQAEQVESSLRLKPPGRITMHM
LHLDDMY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf