prot_H-paniculata_contig11992.1261.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11992.1261.1
Unique Nameprot_H-paniculata_contig11992.1261.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length92
Homology
BLAST of mRNA_H-paniculata_contig11992.1261.1 vs. uniprot
Match: A0A6H5JN95_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN95_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 1.670e-16
Identity = 39/96 (40.62%), Postives = 63/96 (65.62%), Query Frame = 0
Query:    1 MVGSLISLTQCTRFDICFSVIQAARYMSAPIQQHLVAVKRIFRYLQGHPDVPITYSRCEPKLLGYSNASYCT-----RSTTGTMFFFANGLVHFSS 91
            + GSL+ LTQCTR+D+ ++V Q  R  + P Q H+ A K + RYL+G PD+PI Y + + +L  ++++S+ T     RSTTG +FF   GL+++ +
Sbjct:  413 ITGSLLYLTQCTRYDLSYAVHQLTRARANPAQVHMAAPKHLLRYLRGTPDLPIVYKKVQFRLSCFTSSSFGTNPDNGRSTTGYLFFLGGGLINYGA 508          
BLAST of mRNA_H-paniculata_contig11992.1261.1 vs. uniprot
Match: A0A2I0AJC7_9ASPA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0AJC7_9ASPA)

HSP 1 Score: 75.9 bits (185), Expect = 9.820e-16
Identity = 48/96 (50.00%), Postives = 62/96 (64.58%), Query Frame = 0
Query:    1 MVGSLISLTQCTRFDICFSVIQAARYMSAPIQQHLVAVKRIFRYLQGHPDVPITYSR-CEPKLLGYSNASY-CT---RSTTGTMFFFANGLVHFSS 91
            M+GSL+ LT  +R DI FSV   AR+ S P + HLVAVKRIFRYL G   + + YS+   P L+G+S+A   C    +ST+GT  FF N LV +SS
Sbjct:    1 MIGSLLYLTA-SRPDIVFSVCMCARFQSNPKESHLVAVKRIFRYLVGTHSLGLWYSKGTTPNLIGFSDADCRCKVDRKSTSGTCQFFGNALVSWSS 95          
BLAST of mRNA_H-paniculata_contig11992.1261.1 vs. uniprot
Match: A0A2I0AD25_9ASPA (Putative mitochondrial protein n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0AD25_9ASPA)

HSP 1 Score: 71.6 bits (174), Expect = 2.660e-14
Identity = 43/93 (46.24%), Postives = 57/93 (61.29%), Query Frame = 0
Query:    1 MVGSLISLTQCTRFDICFSVIQAARYMSAPIQQHLVAVKRIFRYLQGHPDVPITYSR-CEPKLLGYSNASYCT-----RSTTGTMFFFANGLV 87
            M+GSL+ LT  +R DI FSV    R+ S P + HLVAVKRIFRYL G   + + Y +   P L+G+S+A +       +ST+GT  FF N LV
Sbjct:   10 MIGSLLYLTA-SRPDIVFSVCMCVRFQSNPKKSHLVAVKRIFRYLVGTHSLGLWYPKGTTPNLIGFSDADFARCKVDRKSTSGTCQFFGNALV 101          
BLAST of mRNA_H-paniculata_contig11992.1261.1 vs. uniprot
Match: A0A2I0B4Q1_9ASPA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0B4Q1_9ASPA)

HSP 1 Score: 71.2 bits (173), Expect = 4.270e-13
Identity = 43/97 (44.33%), Postives = 60/97 (61.86%), Query Frame = 0
Query:    1 MVGSLISLTQCTRFDICFSVIQAARYMSAPIQQHLVAVKRIFRYLQGHPDVPITYSR-CEPKLLGYSNASYCT-----RSTTGTMFFFANGLVHFSS 91
            M+GSL+ LT  +R DI FSV   AR+ S P + HL+AVKRIFRYL G   + + Y +   P L+G+S+A +       ++ +GT  FF N LV +SS
Sbjct:    1 MIGSLLYLTA-SRPDIVFSVCMCARFQSNPKKSHLIAVKRIFRYLIGIHSLGLWYPKGTTPNLIGFSDADFAECKVDRKNISGTCQFFGNALVSWSS 96          
BLAST of mRNA_H-paniculata_contig11992.1261.1 vs. uniprot
Match: A0A6H5J897_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J897_9PHAE)

HSP 1 Score: 72.4 bits (176), Expect = 7.680e-13
Identity = 39/98 (39.80%), Postives = 60/98 (61.22%), Query Frame = 0
Query:    1 MVGSLISLTQCTRFDICFSVIQAARYMSAPIQQHLVAVKRIFRYLQGHPDVPITYSRCEPKLLGYSNASYC-------TRSTTGTMFFFANGLVHFSS 91
            +VGSL+ LT  TR++I ++V+   R M+ P  QH+V  KR+ RYL+G PD+P+ + R +  L  Y +AS+         RS+TG +F  A G+V  +S
Sbjct:  488 IVGSLLFLTNTTRWEIGYAVMVLCRGMNKPTNQHMVGAKRVLRYLRGCPDMPLKFRRGQWDLKCYCDASFAGSSERLQKRSSTGYIFILAGGVVSAAS 585          
BLAST of mRNA_H-paniculata_contig11992.1261.1 vs. uniprot
Match: UPI0007EFEF85 (uncharacterized mitochondrial protein AtMg00810-like n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007EFEF85)

HSP 1 Score: 71.6 bits (174), Expect = 1.070e-12
Identity = 44/97 (45.36%), Postives = 60/97 (61.86%), Query Frame = 0
Query:    1 MVGSLISLTQCTRFDICFSVIQAARYMSAPIQQHLVAVKRIFRYLQGHPDVPITYSRCEP-KLLGYSNASYC-----TRSTTGTMFFFANGLVHFSS 91
            MVGSL+ LT  +R DI F+    AR+ + P + HL+A+KRIFRYL+G P++ I Y R     L+G+S+A Y       +STTGT  F  N LV + S
Sbjct:  182 MVGSLLYLTA-SRPDIMFATCLCARFQADPRESHLIAIKRIFRYLKGTPNLGIWYPRDSGFDLIGFSDADYAGCRIDRKSTTGTCQFLGNKLVSWFS 277          
BLAST of mRNA_H-paniculata_contig11992.1261.1 vs. uniprot
Match: UPI001AD8C6C3 (secreted RxLR effector protein 161-like n=1 Tax=Rosa chinensis TaxID=74649 RepID=UPI001AD8C6C3)

HSP 1 Score: 68.6 bits (166), Expect = 1.810e-12
Identity = 40/97 (41.24%), Postives = 59/97 (60.82%), Query Frame = 0
Query:    1 MVGSLISLTQCTRFDICFSVIQAARYMSAPIQQHLVAVKRIFRYLQGHPDVPITYSRCE-PKLLGYSNASYCT-----RSTTGTMFFFANGLVHFSS 91
            +VGSL+ LT  TR DI F V   +RYM  P + HL+AVKRI RYL+G  D  I Y + + P L G++ + Y +     +ST+G +F   +G + +S+
Sbjct:   34 IVGSLMYLTT-TRPDIMFVVSMVSRYMEKPTEDHLLAVKRILRYLKGTVDFGIFYKKLQSPSLCGFTYSDYASYMDDRKSTSGFVFMMGSGAISWST 129          
BLAST of mRNA_H-paniculata_contig11992.1261.1 vs. uniprot
Match: UPI0007EFED75 (uncharacterized mitochondrial protein AtMg00810-like n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007EFED75)

HSP 1 Score: 70.5 bits (171), Expect = 2.770e-12
Identity = 43/97 (44.33%), Postives = 60/97 (61.86%), Query Frame = 0
Query:    1 MVGSLISLTQCTRFDICFSVIQAARYMSAPIQQHLVAVKRIFRYLQGHPDVPITYSRCEP-KLLGYSNASYC-----TRSTTGTMFFFANGLVHFSS 91
            MVGSL+ LT  +R DI FS    AR+ S P + HL+A+KRIFRYL+G P++ I Y +     L+GYS+A +       +STTGT  F  + L+ + S
Sbjct:  182 MVGSLLYLTA-SRPDIMFSTCLCARFQSDPKESHLIAIKRIFRYLKGTPNLGIWYPKDSGFDLIGYSDADFAGCKIDRKSTTGTCQFLGDRLISWFS 277          
BLAST of mRNA_H-paniculata_contig11992.1261.1 vs. uniprot
Match: UPI001C973FE3 (hypothetical protein n=1 Tax=Geminicoccus sp. CPCC 101083 TaxID=2498453 RepID=UPI001C973FE3)

HSP 1 Score: 68.9 bits (167), Expect = 3.620e-12
Identity = 42/97 (43.30%), Postives = 60/97 (61.86%), Query Frame = 0
Query:    1 MVGSLISLTQCTRFDICFSVIQAARYMSAPIQQHLVAVKRIFRYLQGHPDVPITYSRCEPKLL-GYSNASYC-----TRSTTGTMFFFANGLVHFSS 91
            M+GSL+ LT  +R DI FSV   ARY + P++ HL+AVKRIF+YL G  D+ + Y +  P ++  YSNA +       +ST+GT  F  + LV + S
Sbjct:   73 MIGSLLYLTA-SRPDIMFSVCLCARYQANPMESHLLAVKRIFKYLIGTCDLGLFYPKHVPFIIVSYSNADFAGCKTDRKSTSGTCHFLGHALVSWFS 168          
BLAST of mRNA_H-paniculata_contig11992.1261.1 vs. uniprot
Match: A0A699KM99_TANCI (Uncharacterized mitochondrial protein AtMg00810-like n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A699KM99_TANCI)

HSP 1 Score: 68.6 bits (166), Expect = 4.330e-12
Identity = 41/93 (44.09%), Postives = 56/93 (60.22%), Query Frame = 0
Query:    1 MVGSLISLTQCTRFDICFSVIQAARYMSAPIQQHLVAVKRIFRYLQGHPDVPITYSRCEP-KLLGYSNASYCT-----RSTTGTMFFFANGLV 87
            M+GSL+ LT  +R DI F+V   AR+   P + HL AVKRIFRYL+GHP + + Y +  P  L+ YSN+ Y +     +STTG   F    L+
Sbjct:   65 MIGSLMYLTA-SRPDIMFAVCACARHQVTPKECHLHAVKRIFRYLKGHPKLGLWYPKESPFDLVAYSNSDYSSATQDRKSTTGGCLFLGRRLI 156          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11992.1261.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JN95_9PHAE1.670e-1640.63Integrase catalytic domain-containing protein n=1 ... [more]
A0A2I0AJC7_9ASPA9.820e-1650.00Retrovirus-related Pol polyprotein from transposon... [more]
A0A2I0AD25_9ASPA2.660e-1446.24Putative mitochondrial protein n=1 Tax=Apostasia s... [more]
A0A2I0B4Q1_9ASPA4.270e-1344.33Retrovirus-related Pol polyprotein from transposon... [more]
A0A6H5J897_9PHAE7.680e-1339.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI0007EFEF851.070e-1245.36uncharacterized mitochondrial protein AtMg00810-li... [more]
UPI001AD8C6C31.810e-1241.24secreted RxLR effector protein 161-like n=1 Tax=Ro... [more]
UPI0007EFED752.770e-1244.33uncharacterized mitochondrial protein AtMg00810-li... [more]
UPI001C973FE33.620e-1243.30hypothetical protein n=1 Tax=Geminicoccus sp. CPCC... [more]
A0A699KM99_TANCI4.330e-1244.09Uncharacterized mitochondrial protein AtMg00810-li... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 1..91
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 1..91

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11992contigH-paniculata_contig11992:3354..3629 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11992.1261.1mRNA_H-paniculata_contig11992.1261.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11992 3057..4391 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11992.1261.1 ID=prot_H-paniculata_contig11992.1261.1|Name=mRNA_H-paniculata_contig11992.1261.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=92bp
MVGSLISLTQCTRFDICFSVIQAARYMSAPIQQHLVAVKRIFRYLQGHPD
VPITYSRCEPKLLGYSNASYCTRSTTGTMFFFANGLVHFSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like