prot_H-paniculata_contig11982.1255.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11982.1255.1
Unique Nameprot_H-paniculata_contig11982.1255.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length289
Homology
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BLAST of mRNA_H-paniculata_contig11982.1255.1 vs. uniprot
Match: D8LCN8_ECTSI (Heat shock protein 70 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCN8_ECTSI)

HSP 1 Score: 291 bits (746), Expect = 8.850e-90
Identity = 185/298 (62.08%), Postives = 214/298 (71.81%), Query Frame = 0 
Query:    1 RWLKQRSAGVPGSSSPPKGVTLFHNADTSVAGGGGGKKGDGVEHGGDGK-CIVVWPLRLLALRGKGDEARERVQSSLHYEIKVSAEDSQ----DPEDAETSGVRVLLASPDALEAKDKEVWCTVEELLAMLLVGVKAQMEEAHGVTVFTCNLSAPSCLGDVHRVALQRSVFLAGMAPGRFVGAPLAATVGYLWGRPTPELKQPEDLIVSVGMGASFLDVAVMSAKREKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVK----EGAGDAMQYQVKASSGDPACGGLDMDYKVARALL 289
            RWLK R+ G    ++P KGV LFH                      DG    VVWPLRLLALRGKG EA +RVQSSL ++I+VS+ +S+    D  D +TSGVRVLL SPDA E KD+EVW T EE+LAMLL GVKA+ EEAHGV + TCNLSAP CLGD+HRVALQRSVFLAGM PGRFVG+PLAA VGYLWGR  PELK P+DLI++VGMGASFLDV++++  RE S       XXXXXXXXXXXXXXXXXXXXX       +     M+Y+V+AS+GD ACGGLDMDY VARALL
Sbjct:  132 RWLKSRAGGGQAPAAPAKGVKLFHAVGGXXXXXXXXXXXXXXXXXXDGNGAAVVWPLRLLALRGKGAEATQRVQSSLRHDIEVSSVESKEATDDQGDGDTSGVRVLLTSPDAAETKDREVWVTPEEVLAMLLAGVKAKAEEAHGVMIKTCNLSAPGCLGDLHRVALQRSVFLAGMVPGRFVGSPLAAAVGYLWGRSNPELKGPDDLILAVGMGASFLDVSLIAPTREASPPSADSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAEAQGMEYRVRASAGDSACGGLDMDYLVARALL 429
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11982.1255.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LCN8_ECTSI8.850e-9062.08Heat shock protein 70 n=1 Tax=Ectocarpus siliculos... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013126Heat shock protein 70 familyPFAMPF00012HSP70coord: 116..220
e-value: 1.0E-5
score: 24.0
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..164
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 201..219
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 165..189
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 220..289
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 190..200
NoneNo IPR availableSUPERFAMILY53067Actin-like ATPase domaincoord: 73..190

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11982contigH-paniculata_contig11982:1367..7559 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11982.1255.1mRNA_H-paniculata_contig11982.1255.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11982 1367..7559 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11982.1255.1 ID=prot_H-paniculata_contig11982.1255.1|Name=mRNA_H-paniculata_contig11982.1255.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=289bp
RWLKQRSAGVPGSSSPPKGVTLFHNADTSVAGGGGGKKGDGVEHGGDGKC
IVVWPLRLLALRGKGDEARERVQSSLHYEIKVSAEDSQDPEDAETSGVRV
LLASPDALEAKDKEVWCTVEELLAMLLVGVKAQMEEAHGVTVFTCNLSAP
SCLGDVHRVALQRSVFLAGMAPGRFVGAPLAATVGYLWGRPTPELKQPED
LIVSVGMGASFLDVAVMSAKREKSSSSSSGTGAIATADALNKKKKAKAGG
GGKVKEGAGDAMQYQVKASSGDPACGGLDMDYKVARALL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013126Hsp_70_fam