prot_H-paniculata_contig11614.1042.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11614.1042.1
Unique Nameprot_H-paniculata_contig11614.1042.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length85
Homology
BLAST of mRNA_H-paniculata_contig11614.1042.1 vs. uniprot
Match: A0A7S2WN64_9STRA (Geranylgeranyl transferase type-1 subunit beta n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WN64_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 1.090e-18
Identity = 44/86 (51.16%), Postives = 60/86 (69.77%), Query Frame = 0
Query:    2 DEGHLAMTCSALATLSTLGDDLAS--TCRLLR-VRPVCHSPKSFRASLDNPTCDLRFTYCAWAVSSMLGDWSGVNRPKAMAYMERC 84
            D GH+AMT +ALA L TLGDDLA   T  +++ V  +     SF A+LD   CD+R+ YCA A+S+MLGDWSGVN+ KA+ ++ +C
Sbjct:  115 DSGHIAMTYTALAVLLTLGDDLARVHTADIIQAVAALQREDGSFTATLDGSECDMRYLYCACAISTMLGDWSGVNKDKAVEFIRQC 200          
BLAST of mRNA_H-paniculata_contig11614.1042.1 vs. uniprot
Match: A0A6H5KFN4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFN4_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 2.320e-17
Identity = 46/88 (52.27%), Postives = 58/88 (65.91%), Query Frame = 0
Query:    2 DEGHLAMTCSALATLSTLGDDLA----STCRLLRVRPVCHSPKSFRASLDNPTCDLRFTYCAWAVSSMLGDWSGVNRPKAMAYMERCF 85
            DEG+LA T SALATL  L  DL     S   +  +  +     SF+AS  + TCD+RFTYCA AVS+MLG+WSGV+R KA  Y+ERC+
Sbjct:  134 DEGNLAATYSALATLVALDVDLTTGVDSNAIVRALGSLQQEDGSFKASASDSTCDVRFTYCACAVSTMLGNWSGVDRRKAAEYVERCY 221          
BLAST of mRNA_H-paniculata_contig11614.1042.1 vs. uniprot
Match: D7G4Q8_ECTSI (Geranylgeranyltransferase type 1 beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Q8_ECTSI)

HSP 1 Score: 80.5 bits (197), Expect = 4.740e-16
Identity = 44/87 (50.57%), Postives = 57/87 (65.52%), Query Frame = 0
Query:    3 EGHLAMTCSALATLSTLGDDLA----STCRLLRVRPVCHSPKSFRASLDNPTCDLRFTYCAWAVSSMLGDWSGVNRPKAMAYMERCF 85
            EG+LA T SALATL  L  DL     S   +  +  +     SF+AS  + TCD+RFTYCA AVS++LG+WSGV+R KA  Y+ERC+
Sbjct:  101 EGNLAATYSALATLVALDVDLTTGVDSDAIVRALGSLQREDGSFKASASDSTCDVRFTYCACAVSTILGNWSGVDRRKAAEYVERCY 187          
BLAST of mRNA_H-paniculata_contig11614.1042.1 vs. uniprot
Match: A0A1M2V3P2_TRAPU (Geranylgeranyl transferase type-1 subunit beta n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2V3P2_TRAPU)

HSP 1 Score: 68.9 bits (167), Expect = 1.070e-12
Identity = 37/87 (42.53%), Postives = 52/87 (59.77%), Query Frame = 0
Query:    2 DEGHLAMTCSALATLSTLGDDLASTCR--LLRVRPVCHSPK-SFRASLDNPTCDLRFTYCAWAVSSMLGDWSGVNRPKAMAYMERCF 85
            D  HL MT +AL++LS L DD +   R  ++R    C  P  SF A  +    DLR  YCA+ +SSML DWSG+   +A+AY+ +C+
Sbjct:   14 DLPHLVMTYTALSSLSILRDDFSKLDRAGIIRFLTACQQPDGSFSALPNGGESDLRMLYCAFVISSMLDDWSGIAIDRAVAYIRKCY 100          
BLAST of mRNA_H-paniculata_contig11614.1042.1 vs. uniprot
Match: A0A6B2L8R2_9EUKA (Geranylgeranyl transferase type-1 subunit beta n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L8R2_9EUKA)

HSP 1 Score: 70.1 bits (170), Expect = 2.880e-12
Identity = 37/83 (44.58%), Postives = 48/83 (57.83%), Query Frame = 0
Query:    2 DEGHLAMTCSALATLSTLGDDLASTCR--LLRVRPVCHSPK-SFRASLDNPTCDLRFTYCAWAVSSMLGDWSGVNRPKAMAYM 81
            D+GH+AMT  ALA L  LGDD +   +  ++   P    P  SF    D   CD+R+ YCA AVS ML DWSG ++ KA  Y+
Sbjct:   97 DQGHIAMTYVALALLLILGDDFSRVDKKAIIEALPYLQQPSGSFSPVADESECDMRYVYCAAAVSYMLNDWSGFDKDKATQYI 179          
BLAST of mRNA_H-paniculata_contig11614.1042.1 vs. uniprot
Match: M2RMF1_CERS8 (Uncharacterized protein n=1 Tax=Ceriporiopsis subvermispora (strain B) TaxID=914234 RepID=M2RMF1_CERS8)

HSP 1 Score: 70.1 bits (170), Expect = 3.060e-12
Identity = 38/86 (44.19%), Postives = 52/86 (60.47%), Query Frame = 0
Query:    2 DEGHLAMTCSALATLSTLGDDLASTCR---LLRVRPVCHSPKSFRASLDNPTCDLRFTYCAWAVSSMLGDWSGVNRPKAMAYMERC 84
            D  HL MT +AL +L+ L DD +   R   +  +R   H   SF A  D    DLR  YCA+A+SSML DWSG++  +A+AY++RC
Sbjct:   99 DAPHLIMTYAALLSLAILRDDCSKLNRTGIVQLIRACQHEDGSFSALPDGGEADLRSVYCAFALSSMLDDWSGIDIDRAVAYIQRC 184          
BLAST of mRNA_H-paniculata_contig11614.1042.1 vs. uniprot
Match: R7T1B5_DICSQ (Terpenoid cyclases/Protein prenyltransferase n=3 Tax=Dichomitus squalens TaxID=114155 RepID=R7T1B5_DICSQ)

HSP 1 Score: 70.1 bits (170), Expect = 3.070e-12
Identity = 37/85 (43.53%), Postives = 52/85 (61.18%), Query Frame = 0
Query:    4 GHLAMTCSALATLSTLGDDLASTCR--LLRVRPVCHSPK-SFRASLDNPTCDLRFTYCAWAVSSMLGDWSGVNRPKAMAYMERCF 85
            GHL MT +AL  LS L DD ++  R  +L +   C  P  SF A       DLR TYCA+ +SS+L DWSG++   A+AY+++C+
Sbjct:  101 GHLVMTYTALLCLSILRDDFSNLDRRGILHLLRSCQQPDGSFTALPTGGESDLRMTYCAFVISSLLDDWSGIDLDHALAYIDKCY 185          
BLAST of mRNA_H-paniculata_contig11614.1042.1 vs. uniprot
Match: L7M260_RHIPC (Geranylgeranyl transferase type-1 subunit beta n=4 Tax=Rhipicephalinae TaxID=426437 RepID=L7M260_RHIPC)

HSP 1 Score: 69.7 bits (169), Expect = 3.780e-12
Identity = 35/85 (41.18%), Postives = 54/85 (63.53%), Query Frame = 0
Query:    4 GHLAMTCSALATLSTLGDDLASTCR---LLRVRPVCHSPKSFRASLDNPTCDLRFTYCAWAVSSMLGDWSGVNRPKAMAYMERCF 85
            GH+AMT +ALATL  LGDDL+   +   +  ++ +     SF A +     D+RF YCA A+ SML DWSG ++ KA+++++ C+
Sbjct:   74 GHIAMTYTALATLIILGDDLSRVDKQAIMQGLKALQQESGSFMALIHGSEDDMRFVYCAAAICSMLHDWSGFDKEKAVSFIQGCY 158          
BLAST of mRNA_H-paniculata_contig11614.1042.1 vs. uniprot
Match: A0A6M2CV33_RHIMP (Geranylgeranyl transferase type-1 subunit beta n=2 Tax=Rhipicephalus microplus TaxID=6941 RepID=A0A6M2CV33_RHIMP)

HSP 1 Score: 68.6 bits (166), Expect = 9.740e-12
Identity = 34/85 (40.00%), Postives = 53/85 (62.35%), Query Frame = 0
Query:    4 GHLAMTCSALATLSTLGDDLASTCR---LLRVRPVCHSPKSFRASLDNPTCDLRFTYCAWAVSSMLGDWSGVNRPKAMAYMERCF 85
            GH+AMT +AL TL  LGDDL+   R   +  ++ +     SF A +     D+RF YCA A+ S+L DWSG ++ KA+++++ C+
Sbjct:   72 GHIAMTYTALTTLIILGDDLSRVDRQAIMQGLKALQQESGSFMALIHGSEDDMRFVYCAAAICSLLHDWSGFDKEKAVSFIQACY 156          
BLAST of mRNA_H-paniculata_contig11614.1042.1 vs. uniprot
Match: UPI000625C54A (geranylgeranyl transferase type-1 subunit beta n=1 Tax=Athalia rosae TaxID=37344 RepID=UPI000625C54A)

HSP 1 Score: 67.8 bits (164), Expect = 1.940e-11
Identity = 36/83 (43.37%), Postives = 51/83 (61.45%), Query Frame = 0
Query:    4 GHLAMTCSALATLSTLGDDLASTCR---LLRVRPVCHSPKSFRASLDNPTCDLRFTYCAWAVSSMLGDWSGVNRPKAMAYMER 83
            GHL MT   LA+L TLGDDL+   +   +  VR   +   SF A+L     D+RF YCA  +SS+L DWSG+++ KA+ Y+ +
Sbjct:   94 GHLTMTYLGLASLLTLGDDLSRVDKKSIIEGVRACQNDDGSFTATLTGSESDMRFIYCACCISSILDDWSGIDKHKAIDYITK 176          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11614.1042.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2WN64_9STRA1.090e-1851.16Geranylgeranyl transferase type-1 subunit beta n=1... [more]
A0A6H5KFN4_9PHAE2.320e-1752.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G4Q8_ECTSI4.740e-1650.57Geranylgeranyltransferase type 1 beta n=1 Tax=Ecto... [more]
A0A1M2V3P2_TRAPU1.070e-1242.53Geranylgeranyl transferase type-1 subunit beta n=1... [more]
A0A6B2L8R2_9EUKA2.880e-1244.58Geranylgeranyl transferase type-1 subunit beta n=1... [more]
M2RMF1_CERS83.060e-1244.19Uncharacterized protein n=1 Tax=Ceriporiopsis subv... [more]
R7T1B5_DICSQ3.070e-1243.53Terpenoid cyclases/Protein prenyltransferase n=3 T... [more]
L7M260_RHIPC3.780e-1241.18Geranylgeranyl transferase type-1 subunit beta n=4... [more]
A0A6M2CV33_RHIMP9.740e-1240.00Geranylgeranyl transferase type-1 subunit beta n=2... [more]
UPI000625C54A1.940e-1143.37geranylgeranyl transferase type-1 subunit beta n=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.50.10.20coord: 1..85
e-value: 4.7E-15
score: 57.3
NoneNo IPR availablePANTHERPTHR11774GERANYLGERANYL TRANSFERASE TYPE BETA SUBUNITcoord: 2..84
NoneNo IPR availablePANTHERPTHR11774:SF4GERANYLGERANYL TRANSFERASE TYPE-1 SUBUNIT BETAcoord: 2..84
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..85
IPR008930Terpenoid cyclases/protein prenyltransferase alpha-alpha toroidSUPERFAMILY48239Terpenoid cyclases/Protein prenyltransferasescoord: 2..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11614contigH-paniculata_contig11614:3619..4397 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11614.1042.1mRNA_H-paniculata_contig11614.1042.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11614 3619..4397 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11614.1042.1 ID=prot_H-paniculata_contig11614.1042.1|Name=mRNA_H-paniculata_contig11614.1042.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=85bp
MDEGHLAMTCSALATLSTLGDDLASTCRLLRVRPVCHSPKSFRASLDNPT
CDLRFTYCAWAVSSMLGDWSGVNRPKAMAYMERCF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008930Terpenoid_cyclase/PrenylTrfase