prot_H-paniculata_contig1158.1015.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig1158.1015.1
Unique Name	prot_H-paniculata_contig1158.1015.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	333

Homology

[Close]

BLAST of mRNA_H-paniculata_contig1158.1015.1 vs. uniprot
Match: D8LR26_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR26_ECTSI)

HSP 1 Score: 92.8 bits (229), Expect = 6.380e-17
Identity = 56/101 (55.45%), Postives = 74/101 (73.27%), Query Frame = 0

Query:  228 QTRAEVAARESAQKAIDDAETRAKITREEHEKSAKELDEQLATAKDIQSKKLQEKLAKKRKDREEQLEHENATTAQIEMARTTLAENEAKELAALENHIAQ 328
            Q RAE A R SA+ AID+AE RAK+ REEHE+S KELD QLA A+  Q  KL+++LAKKRK+RE+QL  E+A    ++ AR  + E E +E+A LENH+A+
Sbjct: 5617 QARAEHAVRMSAKNAIDEAEKRAKLAREEHEESTKELDMQLAAARITQGNKLKDRLAKKRKEREKQLTRESADAEAVKEARRIMEEEEQREVARLENHLAR 5717

[Close]

BLAST of mRNA_H-paniculata_contig1158.1015.1 vs. uniprot
Match: A0A6H5KWQ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ4_9PHAE)

HSP 1 Score: 68.6 bits (166), Expect = 6.440e-9
Identity = 45/72 (62.50%), Postives = 55/72 (76.39%), Query Frame = 0

Query:  228 QTRAEVAARESAQKAIDDAETRAKITREEHEKSAKELDEQLATAKDIQSKKLQEKLAKKRKDREEQLEHENA 299
            Q RAE AAR SA+ AID+AE RAK+ REEHE+S KELD QLA A+     KL+++LAKKRK+RE+QL  E A
Sbjct: 2093 QARAEHAARMSAKNAIDEAEKRAKLAREEHEESTKELDMQLAAAR---GSKLKDRLAKKRKEREKQLVRERA 2161

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig1158.1015.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig1158.1015.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LR26_ECTSI	6.380e-17	55.45	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KWQ4_9PHAE	6.440e-9	62.50	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 276..296
None	No IPR available	COILS	Coil	Coil	coord: 312..332
None	No IPR available	COILS	Coil	Coil	coord: 145..165
None	No IPR available	COILS	Coil	Coil	coord: 236..274
None	No IPR available	COILS	Coil	Coil	coord: 25..56
None	No IPR available	COILS	Coil	Coil	coord: 184..215
None	No IPR available	COILS	Coil	Coil	coord: 87..121

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig1158	contig	H-paniculata_contig1158:10637..14691 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig1158.1015.1	mRNA_H-paniculata_contig1158.1015.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig1158 10637..14691 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig1158.1015.1 ID=prot_H-paniculata_contig1158.1015.1|Name=mRNA_H-paniculata_contig1158.1015.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=333bp
EARVLAARNSALAEELAMEQRSDAGRKLREQNEEAVKELSRSLEQTKRSR
KDMLAASLKERKAKMVAELKSRKASKQEVATNLALVDQEADEEMRKHEET
LEEETTALMEVERRMLASREEEARAAQHTAQTSKRMAEAETKRLRRQHES
QQRILEDTLESKRRDKRRALSERMARRREEKMAAAETTASKKQVEADLEK
ERKEAQRELEEEHAQKLCKALEESAQKQTRAEVAARESAQKAIDDAETRA
KITREEHEKSAKELDEQLATAKDIQSKKLQEKLAKKRKDREEQLEHENAT
TAQIEMARTTLAENEAKELAALENHIAQEKVS*