mRNA_H-paniculata_contig1158.1015.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig1158.1015.1 vs. uniprot
Match: D8LR26_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR26_ECTSI) HSP 1 Score: 92.8 bits (229), Expect = 6.380e-17 Identity = 56/101 (55.45%), Postives = 74/101 (73.27%), Query Frame = 1 Query: 682 QTRAEVAARESAQKAIDDAETRAKITREEHEKSAKELDEQLATAKDIQSKKLQEKLAKKRKDREEQLEHENATTAQIEMARTTLAENEAKELAALENHIAQ 984 Q RAE A R SA+ AID+AE RAK+ REEHE+S KELD QLA A+ Q KL+++LAKKRK+RE+QL E+A ++ AR + E E +E+A LENH+A+ Sbjct: 5617 QARAEHAVRMSAKNAIDEAEKRAKLAREEHEESTKELDMQLAAARITQGNKLKDRLAKKRKEREKQLTRESADAEAVKEARRIMEEEEQREVARLENHLAR 5717
BLAST of mRNA_H-paniculata_contig1158.1015.1 vs. uniprot
Match: A0A6H5KWQ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ4_9PHAE) HSP 1 Score: 68.6 bits (166), Expect = 6.440e-9 Identity = 45/72 (62.50%), Postives = 55/72 (76.39%), Query Frame = 1 Query: 682 QTRAEVAARESAQKAIDDAETRAKITREEHEKSAKELDEQLATAKDIQSKKLQEKLAKKRKDREEQLEHENA 897 Q RAE AAR SA+ AID+AE RAK+ REEHE+S KELD QLA A+ KL+++LAKKRK+RE+QL E A Sbjct: 2093 QARAEHAARMSAKNAIDEAEKRAKLAREEHEESTKELDMQLAAAR---GSKLKDRLAKKRKEREKQLVRERA 2161 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1158.1015.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1158.1015.1 >prot_H-paniculata_contig1158.1015.1 ID=prot_H-paniculata_contig1158.1015.1|Name=mRNA_H-paniculata_contig1158.1015.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=333bp EARVLAARNSALAEELAMEQRSDAGRKLREQNEEAVKELSRSLEQTKRSRback to top mRNA from alignment at H-paniculata_contig1158:10637..14691+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1158.1015.1 ID=mRNA_H-paniculata_contig1158.1015.1|Name=mRNA_H-paniculata_contig1158.1015.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4055bp|location=Sequence derived from alignment at H-paniculata_contig1158:10637..14691+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1158:10637..14691+ >mRNA_H-paniculata_contig1158.1015.1 ID=mRNA_H-paniculata_contig1158.1015.1|Name=mRNA_H-paniculata_contig1158.1015.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1998bp|location=Sequence derived from alignment at H-paniculata_contig1158:10637..14691+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |