prot_H-paniculata_contig1147.954.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1147.954.1
Unique Nameprot_H-paniculata_contig1147.954.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length401
Homology
BLAST of mRNA_H-paniculata_contig1147.954.1 vs. uniprot
Match: D7FTU6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTU6_ECTSI)

HSP 1 Score: 75.5 bits (184), Expect = 6.940e-11
Identity = 39/94 (41.49%), Postives = 53/94 (56.38%), Query Frame = 0
Query:   34 IEADICDVCNTAAPADLAALARH---GKGVTCDPSCVEHEEGDSLYCNALGLGQVCRFCGICEDCKPCP-----PDWTALPTATPRASSIEFDN 119
            ++ D C VC+      +A LA +   GK V CDPSC++    D L+CN  GLGQ+CR CG C  C+PCP     P+ T+ PT  P    + FD+
Sbjct: 1309 VDDDECSVCSNLTDEQVAVLASYDNGGKQVVCDPSCLDGVT-DPLHCNYFGLGQICRGCGECSLCEPCPGATPAPETTSSPTMVP---DLGFDD 1398          
BLAST of mRNA_H-paniculata_contig1147.954.1 vs. uniprot
Match: D7G5P7_ECTSI (Similar to Mucin-1 (MUC-1) (Polymorphic epithelial mucin) (PEM) (PEMT) (Episialin) (Tumor-associated mucin) (Carcinoma-associated mucin) (Tumor-associated epithelial membrane antigen) (EMA) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5P7_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 1.130e-9
Identity = 66/231 (28.57%), Postives = 99/231 (42.86%), Query Frame = 0
Query:   17 SYIALLLQNTQGRGPRNIEADICDVCNTAAPADLAALARHGKGVTCDPSCVEHEEGDSLY----CNALGLGQVCRFCGI--CED----CKPCPPDWTALPTATPRASSI--------EFD-------NEC--AKCQGNLTDANIAALAERLSGVLCDASCFMGDT-------LYCNIFGLGQICRLC--GSCEG------CKPCSE-ETFFGISDAPSPSPMTEVKCPEEV 204
            S +A + Q   G+  R ++A   D     + AD+ AL   GK + CDP+C   + G  ++    CN  GL + CR C +  CE     C PC  +     T  P+   +        E D       + C  A C+ N   A+++ + +    + CD  C   DT       L+CN+ GLGQ+CR C   +C G      C PC+E +     S  P+PS +     P  V
Sbjct:   23 SGVARITQAGTGQVARRLDACSSDSDCQGSDADMEALDNEGKTIFCDPAC--EDTGTDIFGGTWCNHFGL-EGCRACDVYNCEGSSGACVPCNGELPEETTPAPQEEGLTLAPISPGETDPPFPIDASSCTAAACEDNADSADLSYIDDNSLTLYCDDKC--SDTPSDPFGGLWCNMRGLGQLCRACRADNCVGWTEDDTCLPCNELQETLPPSVTPAPSDLEATPVPAAV 248          
BLAST of mRNA_H-paniculata_contig1147.954.1 vs. uniprot
Match: A0A6H5KTW1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTW1_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 1.600e-7
Identity = 29/62 (46.77%), Postives = 38/62 (61.29%), Query Frame = 0
Query:   41 VCNTAAPADLAALARH---GKGVTCDPSCVEHEEGDSLYCNALGLGQVCRFCGICEDCKPCP 99
            +C   +PA   ALA +   GK + CDP+C+    GD  +CN  GLGQ+CR CG C +C PCP
Sbjct:  319 MCADISPAQEEALAMYDGGGKVIVCDPTCLG---GDISHCNYFGLGQLCRGCGSCSECVPCP 377          
BLAST of mRNA_H-paniculata_contig1147.954.1 vs. uniprot
Match: D8LI25_ECTSI (Mucin 17-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI25_ECTSI)

HSP 1 Score: 64.7 bits (156), Expect = 1.850e-7
Identity = 32/71 (45.07%), Postives = 44/71 (61.97%), Query Frame = 0
Query:  113 SSIEFDNECAKCQGNLTDANIAALAERLSG---VLCDASCFMG-DTLYCNIFGLGQICRLCGSCEGCKPCS 179
            +  +  ++CA C  NL++  + ALA    G   V+CD+ C  G D L C+ FGLGQICR CG C+GC+ CS
Sbjct: 1172 ADADTTSDCAACS-NLSEVQMLALAAHPGGAKRVVCDSDCLDGVDVLDCDYFGLGQICRGCGDCDGCEACS 1241          
BLAST of mRNA_H-paniculata_contig1147.954.1 vs. uniprot
Match: D7G4W7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4W7_ECTSI)

HSP 1 Score: 62.0 bits (149), Expect = 7.540e-7
Identity = 31/68 (45.59%), Postives = 40/68 (58.82%), Query Frame = 0
Query:   35 EADICDVCNTAAPADLAALARH---GKGVTCDPSCVEHEEGDSLYCNALGLGQVCRFCGICEDCKPCP 99
            EA+I  +C   +PA   ALA +   GK + CDP+C+     D  +CN  GLGQ+CR CG C  C PCP
Sbjct:  349 EAEIA-MCADISPAQEEALAMYDGGGKVIVCDPTCLGE---DISHCNYFGLGQLCRGCGSCSGCDPCP 412          
BLAST of mRNA_H-paniculata_contig1147.954.1 vs. uniprot
Match: A0A6H5L1V0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1V0_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 4.270e-6
Identity = 27/63 (42.86%), Postives = 37/63 (58.73%), Query Frame = 0
Query:   34 IEADICDVCNTAAPADLAALARH---GKGVTCDPSCVEHEEGDSLYCNALGLGQVCRFCGICE 93
            ++ D C VC+      +A LA +   GK V CDP+C++    D L+CN  GLGQ+CR CG C 
Sbjct:   10 VDDDECSVCSNLTDEQVAILASYDNGGKQVVCDPTCLDGVT-DPLHCNYFGLGQICRGCGDCS 71          
BLAST of mRNA_H-paniculata_contig1147.954.1 vs. uniprot
Match: A0A6H5L314_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L314_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 9.120e-6
Identity = 27/63 (42.86%), Postives = 37/63 (58.73%), Query Frame = 0
Query:   34 IEADICDVCNTAAPADLAALARH---GKGVTCDPSCVEHEEGDSLYCNALGLGQVCRFCGICE 93
            ++ D C VC+      +A LA +   GK V CDP+C++    D L+CN  GLGQ+CR CG C 
Sbjct:  426 VDDDECSVCSNLTDEQVAILASYDNGGKQVVCDPTCLDGVT-DPLHCNYFGLGQICRGCGDCS 487          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1147.954.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FTU6_ECTSI6.940e-1141.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G5P7_ECTSI1.130e-928.57Similar to Mucin-1 (MUC-1) (Polymorphic epithelial... [more]
A0A6H5KTW1_9PHAE1.600e-746.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LI25_ECTSI1.850e-745.07Mucin 17-like protein n=1 Tax=Ectocarpus siliculos... [more]
D7G4W7_ECTSI7.540e-745.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L1V0_9PHAE4.270e-642.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L314_9PHAE9.120e-642.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 13..23
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..400
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 24..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..28
score: 0.512

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1147contigH-paniculata_contig1147:4422..12990 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1147.954.1mRNA_H-paniculata_contig1147.954.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1147 4254..13127 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1147.954.1 ID=prot_H-paniculata_contig1147.954.1|Name=mRNA_H-paniculata_contig1147.954.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=401bp
MVSYSDMRTVRMVMICSYIALLLQNTQGRGPRNIEADICDVCNTAAPADL
AALARHGKGVTCDPSCVEHEEGDSLYCNALGLGQVCRFCGICEDCKPCPP
DWTALPTATPRASSIEFDNECAKCQGNLTDANIAALAERLSGVLCDASCF
MGDTLYCNIFGLGQICRLCGSCEGCKPCSEETFFGISDAPSPSPMTEVKC
PEEVPLTLECGLEQEGLSCGYDCVCCDGTTERNELCEPLDGSASNVCGFS
TFYNCQERVWVTLSVDFTLCPEPTSGGPTHPKTRDTPSPSAILTSTPPPS
IVFTGSPVSQRLPDGGSDGERGCPVNPPQMERCSRDQEGIECKYGCVCCD
ASTEFDENCEPTEAFEGDRCAFTNFFWCERGQWIWAVSDPYCPSWYSSIP
*
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